Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4845
         (633 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AC084158-1|AAK68563.2| 1256|Caenorhabditis elegans Hypothetical ...    30   1.6  
U88169-6|AAB42236.2|  216|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z80344-3|CAB02488.2|  491|Caenorhabditis elegans Hypothetical pr...    28   4.8  
U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical pr...    28   4.8  
AF025468-4|AAB71045.1|  449|Caenorhabditis elegans Hypothetical ...    28   4.8  

>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical
           protein F16A11.3b protein.
          Length = 1364

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +1

Query: 178 GNGRSD-LSTGSRGWPAGTSRRCPSDCPAVTWKLSSALW 291
           GNG S  ++TG     A T R C  + PAV + L  A W
Sbjct: 823 GNGSSTTIATGDPSLCAETYRHCAHNFPAVCYTLGRAAW 861


>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
            F16A11.3a protein.
          Length = 1490

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +1

Query: 178  GNGRSD-LSTGSRGWPAGTSRRCPSDCPAVTWKLSSALW 291
            GNG S  ++TG     A T R C  + PAV + L  A W
Sbjct: 949  GNGSSTTIATGDPSLCAETYRHCAHNFPAVCYTLGRAAW 987


>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical protein
            F16A11.3c protein.
          Length = 1046

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +1

Query: 178  GNGRSD-LSTGSRGWPAGTSRRCPSDCPAVTWKLSSALW 291
            GNG S  ++TG     A T R C  + PAV + L  A W
Sbjct: 949  GNGSSTTIATGDPSLCAETYRHCAHNFPAVCYTLGRAAW 987


>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical
           protein F16A11.3b protein.
          Length = 1364

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +1

Query: 178 GNGRSD-LSTGSRGWPAGTSRRCPSDCPAVTWKLSSALW 291
           GNG S  ++TG     A T R C  + PAV + L  A W
Sbjct: 823 GNGSSTTIATGDPSLCAETYRHCAHNFPAVCYTLGRAAW 861


>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
            F16A11.3a protein.
          Length = 1490

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +1

Query: 178  GNGRSD-LSTGSRGWPAGTSRRCPSDCPAVTWKLSSALW 291
            GNG S  ++TG     A T R C  + PAV + L  A W
Sbjct: 949  GNGSSTTIATGDPSLCAETYRHCAHNFPAVCYTLGRAAW 987


>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical protein
            F16A11.3c protein.
          Length = 1046

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +1

Query: 178  GNGRSD-LSTGSRGWPAGTSRRCPSDCPAVTWKLSSALW 291
            GNG S  ++TG     A T R C  + PAV + L  A W
Sbjct: 949  GNGSSTTIATGDPSLCAETYRHCAHNFPAVCYTLGRAAW 987


>AC084158-1|AAK68563.2| 1256|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.19 protein.
          Length = 1256

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +2

Query: 431 PHLLQGAGRAPLSDHRHARLHVH*QDAGRCRV--PXDPRGGH 550
           PH LQ AGR    D+ +  L  H   AG   V  P +PR  H
Sbjct: 72  PHELQIAGRVARQDNNNDHLDTHRSSAGHELVDSPLEPRDSH 113


>U88169-6|AAB42236.2|  216|Caenorhabditis elegans Hypothetical
           protein T03F1.8a protein.
          Length = 216

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 544 TSRVSWYXAPSRVLSMNMQPCMPVI 470
           TSRV+W+  PS    +   PC P++
Sbjct: 4   TSRVAWFWRPSCQSFIRKMPCRPIV 28


>Z80344-3|CAB02488.2|  491|Caenorhabditis elegans Hypothetical
           protein F15D4.5 protein.
          Length = 491

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 18/72 (25%), Positives = 26/72 (36%)
 Frame = +1

Query: 1   ECCRSRQRQQYNMYRKSFRCYCSVMEGEQPSSNYLLANKPFSTARGQYEAVYHSFFLNSG 180
           E C +R          +F  YC  ++G QP      A+ P        E   H   +  G
Sbjct: 416 EFCGTRDNHTNCPMENTFCKYCKTLKGNQPGWKEAAAHHPAVCEHAPKEHNTHEPPMKKG 475

Query: 181 NGRSDLSTGSRG 216
              S  +T +RG
Sbjct: 476 RIMSKRTTSNRG 487


>U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical
           protein T20B12.1 protein.
          Length = 771

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -2

Query: 278 DSFHVTAGQSLGHLLDVPAGHPRE-PVLRSERPLPELRKNEWYTASYCPLAVEN 120
           D  +  A +SLGHLL +          LR    L  ++   W+ A YC   +EN
Sbjct: 447 DDRNARAHRSLGHLLLMDKKFEEAYKHLRRSLELQPIQLGTWFNAGYCAWKLEN 500


>AF025468-4|AAB71045.1|  449|Caenorhabditis elegans Hypothetical
           protein T27A1.5 protein.
          Length = 449

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = -2

Query: 326 LKVPHRP--GELIVHKAEDSFHVTAGQSLGHLLDVPAG 219
           L+  H+P  GE+   +  DS  +TA Q+L H++ V  G
Sbjct: 17  LRGSHQPTMGEMFASRVRDSRSITADQALIHMIKVMMG 54


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,397,620
Number of Sequences: 27780
Number of extensions: 322422
Number of successful extensions: 793
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)