Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4845
         (633 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.9  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   3.3  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   3.3  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   9.9  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   9.9  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   9.9  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 301 NSSSIRLKTASTSPLGNRSGIFSTC 227
           ++S + L  A  SPLG+ S   STC
Sbjct: 476 SASDVTLDEAVKSPLGSVSSTESTC 500


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 299 LIVHKAEDSFHVTAGQSLGHLLD 231
           +I   A+DSFH  +  +L H  D
Sbjct: 212 IIYQNADDSFHRLSSHTLNHNSD 234


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/26 (30%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +1

Query: 34  NMYRKSFRCYCSVMEGEQ--PSSNYL 105
           + +++ F CYC V  G +  P+ +Y+
Sbjct: 421 SFFQQFFHCYCPVRFGRKADPNGDYI 446


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 44  VNLFGATVVSWRVNNQA 94
           V +FG +  SWR   QA
Sbjct: 165 VGVFGGSAWSWREERQA 181


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 44  VNLFGATVVSWRVNNQA 94
           V +FG +  SWR   QA
Sbjct: 165 VGVFGGSAWSWREERQA 181


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +3

Query: 411 FSCQLLLHTYFKVPDVRRCQITGMH 485
           F  +  ++ Y    +VR C++ G+H
Sbjct: 152 FHPRCAVNNYNDPSNVRNCELVGLH 176


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,790
Number of Sequences: 438
Number of extensions: 3954
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)