Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4844
(580 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 45 3e-05
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr... 45 3e-05
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 45 3e-05
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l... 45 3e-05
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 37 0.009
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 37 0.009
U82935-1|AAB40868.1| 680|Caenorhabditis elegans protein kinase ... 30 1.4
U29376-3|AAM51503.1| 680|Caenorhabditis elegans Protein kinase ... 30 1.4
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 28 4.2
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr... 28 5.5
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li... 28 5.5
>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
protein B0457.1b protein.
Length = 1012
Score = 45.2 bits (102), Expect = 3e-05
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +3
Query: 15 NQQTVVMAYAFTILNSLQGLVIFIFHCLQNDKFRNE 122
+ +++VMAY FTI NSLQGL IF+FH + +K R +
Sbjct: 765 DSRSIVMAYVFTISNSLQGLFIFLFHVVFAEKMRKD 800
>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
protein B0457.1a protein.
Length = 1014
Score = 45.2 bits (102), Expect = 3e-05
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +3
Query: 15 NQQTVVMAYAFTILNSLQGLVIFIFHCLQNDKFRNE 122
+ +++VMAY FTI NSLQGL IF+FH + +K R +
Sbjct: 767 DSRSIVMAYVFTISNSLQGLFIFLFHVVFAEKMRKD 802
>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
protein LAT-1B protein.
Length = 1012
Score = 45.2 bits (102), Expect = 3e-05
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +3
Query: 15 NQQTVVMAYAFTILNSLQGLVIFIFHCLQNDKFRNE 122
+ +++VMAY FTI NSLQGL IF+FH + +K R +
Sbjct: 765 DSRSIVMAYVFTISNSLQGLFIFLFHVVFAEKMRKD 800
>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
protein LAT-1A protein.
Length = 1014
Score = 45.2 bits (102), Expect = 3e-05
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +3
Query: 15 NQQTVVMAYAFTILNSLQGLVIFIFHCLQNDKFRNE 122
+ +++VMAY FTI NSLQGL IF+FH + +K R +
Sbjct: 767 DSRSIVMAYVFTISNSLQGLFIFLFHVVFAEKMRKD 802
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin receptor
protein 2 protein.
Length = 1338
Score = 37.1 bits (82), Expect = 0.009
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +3
Query: 36 AYAFTILNSLQGLVIFIFHCLQNDKFRNECARLSRRHRWLSCCL 167
A+ FTILN QG+ IF+ H + N+K R A + R R CCL
Sbjct: 1115 AWIFTILNCTQGIFIFVLHVVLNEKVR---ASIVRWLRTGICCL 1155
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 37.1 bits (82), Expect = 0.009
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +3
Query: 36 AYAFTILNSLQGLVIFIFHCLQNDKFRNECARLSRRHRWLSCCL 167
A+ FTILN QG+ IF+ H + N+K R A + R R CCL
Sbjct: 1115 AWIFTILNCTQGIFIFVLHVVLNEKVR---ASIVRWLRTGICCL 1155
>U82935-1|AAB40868.1| 680|Caenorhabditis elegans protein kinase C2
A isoform protein.
Length = 680
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 576 IRSRQSRPPFCSKSKMANATSDFDNRSVFPSP 481
I +RQ +PPF K K A+ TS+FD+ P
Sbjct: 617 IETRQIQPPFKPKLKSADDTSNFDSEFTHEVP 648
>U29376-3|AAM51503.1| 680|Caenorhabditis elegans Protein kinase c
protein 2, isoforma protein.
Length = 680
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 576 IRSRQSRPPFCSKSKMANATSDFDNRSVFPSP 481
I +RQ +PPF K K A+ TS+FD+ P
Sbjct: 617 IETRQIQPPFKPKLKSADDTSNFDSEFTHEVP 648
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
protein T01D3.7 protein.
Length = 2882
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -1
Query: 472 CIDAMLCECDALW-GMFCGVGTRIDLASSFG 383
CI CECDA W G C V + ID + G
Sbjct: 837 CIQPNSCECDAGWMGETCSVTSCIDSQCTHG 867
>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical protein
F31D5.5 protein.
Length = 1788
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 39 YAFTILNSLQGLVIFIFHCLQNDKFRNECAR-LSRRHRW 152
Y F +L QG+ +F+ + + RNE + SR +W
Sbjct: 1737 YIFVLLLGTQGIDLFLIFLYRRQRLRNESRKWSSREEKW 1775
>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
protein MTH-1 protein.
Length = 1757
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 39 YAFTILNSLQGLVIFIFHCLQNDKFRNECAR-LSRRHRW 152
Y F +L QG+ +F+ + + RNE + SR +W
Sbjct: 1706 YIFVLLLGTQGIDLFLIFLYRRQRLRNESRKWSSREEKW 1744
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,213,601
Number of Sequences: 27780
Number of extensions: 298175
Number of successful extensions: 811
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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