Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4829
         (759 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014135-150|AAN06593.1| 3183|Drosophila melanogaster CG2999-PB,...    30   3.9  
AY049773-1|AAL12209.1| 1483|Drosophila melanogaster defective tr...    29   9.1  
AE014134-3393|AAN11119.2| 1483|Drosophila melanogaster CG31623-P...    29   9.1  

>AE014135-150|AAN06593.1| 3183|Drosophila melanogaster CG2999-PB,
            isoform B protein.
          Length = 3183

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
 Frame = -3

Query: 427  TSGPDRRCPAYTIIHSSRSSHLXXXXXX*IPTAAPSAELFCESK--PSRVPPKRIQKKTF 254
            TSG   + P   + H + SSHL           +P+   +C+ K  P   P K    K +
Sbjct: 1146 TSGTYSKAPPEVLTHETNSSHLEFNHESESLFNSPNTSSYCKQKFVPGTSPAK--PSKVW 1203

Query: 253  KSVTCL*ACNNKL 215
            K +  + A N KL
Sbjct: 1204 KRLNTILADNLKL 1216


>AY049773-1|AAL12209.1| 1483|Drosophila melanogaster defective
            transmitter-recyclingprotein protein.
          Length = 1483

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 19/76 (25%), Positives = 32/76 (42%)
 Frame = +3

Query: 96   DVEWLLPIDIYNINAATHHEI*VVKSQNSYNVTFRSLCIMSLLLQAYKQVTDLNVFFCMR 275
            D E+   +D+  +NA+   E   +    SYN     +   SL  Q   +  ++    C R
Sbjct: 1032 DAEFFQKLDLQKVNASEDSEP-AINCMRSYNELQAYMKSGSLNTQLNSEEAEMLQTMCSR 1090

Query: 276  LGGTLDGLDSQNSSAD 323
            +   +D   SQNS  +
Sbjct: 1091 VASDVDKPKSQNSKEE 1106


>AE014134-3393|AAN11119.2| 1483|Drosophila melanogaster CG31623-PA
            protein.
          Length = 1483

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 19/76 (25%), Positives = 32/76 (42%)
 Frame = +3

Query: 96   DVEWLLPIDIYNINAATHHEI*VVKSQNSYNVTFRSLCIMSLLLQAYKQVTDLNVFFCMR 275
            D E+   +D+  +NA+   E   +    SYN     +   SL  Q   +  ++    C R
Sbjct: 1032 DAEFFQKLDLQKVNASEDSEP-AINCMRSYNELQAYMKSGSLNTQLNSEEAEMLQTMCSR 1090

Query: 276  LGGTLDGLDSQNSSAD 323
            +   +D   SQNS  +
Sbjct: 1091 VASDVDKPKSQNSKEE 1106


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,397,099
Number of Sequences: 53049
Number of extensions: 700238
Number of successful extensions: 1472
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1472
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)