Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4828
(715 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_1069 + 8731567-8731632,8732120-8732281,8733028-8733081,873... 103 2e-22
09_04_0070 + 14308446-14308511,14308844-14309005,14309420-143094... 99 2e-21
08_02_0751 + 20789843-20789908,20791152-20791313,20791516-207915... 100 2e-21
02_01_0593 + 4408229-4408294,4408764-4409096,4409756-4409794,440... 91 8e-19
08_02_0129 - 12876477-12876650,12877058-12877150 40 0.002
02_05_0110 + 25914110-25915006,25915726-25915797,25916411-259166... 33 0.30
11_01_0658 + 5342508-5343602,5343697-5343764,5343994-5344042,534... 31 0.91
06_01_0675 + 4937309-4937354,4937606-4937718,4937810-4937905,493... 31 0.91
04_04_0639 + 26883810-26883821,26884131-26884307,26885276-268853... 31 0.91
12_02_1041 + 25626210-25626595,25628607-25630542,25630572-25630613 30 2.1
11_01_0657 + 5322295-5323367,5323436-5323555,5323743-5323791,532... 29 3.7
10_08_0799 - 20650799-20650947,20651022-20651114,20651906-206519... 29 3.7
02_01_0742 + 5524149-5524214,5524609-5524641,5524750-5524880,552... 28 6.4
10_07_0061 + 12489552-12489674,12490761-12490836,12490916-124909... 28 8.5
02_05_0402 + 28687597-28687671,28688123-28688235,28688927-286894... 28 8.5
01_07_0028 - 40588611-40588718,40588812-40588901,40589966-405901... 28 8.5
>06_01_1069 +
8731567-8731632,8732120-8732281,8733028-8733081,
8733557-8733630,8733706-8733786,8734902-8735079,
8735336-8735506,8736113-8736202,8736284-8736331,
8736447-8736562,8736655-8736733,8737101-8737223
Length = 413
Score = 103 bits (246), Expect = 2e-22
Identities = 49/128 (38%), Positives = 83/128 (64%)
Frame = +3
Query: 162 LRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAG 341
LR PQFQ + A++Q NP +L +LQ++G+ NP +L++I ++Q F+R++NE + AAG
Sbjct: 287 LRQLPQFQALLALVQANPQILQPMLQELGKQNPQILRLIQENQAEFLRLVNESPDSGAAG 346
Query: 342 VASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAAN 521
N+ + Q + V+ +++EAI+RL+A+GF +V++ +FAC K+E LAAN
Sbjct: 347 ----GNI--LGQLAAAMPQALTVTPEEREAIQRLEAMGFNRELVLEVFFACNKDEELAAN 400
Query: 522 FLLSQNFD 545
+LL +
Sbjct: 401 YLLDHGHE 408
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/36 (52%), Positives = 28/36 (77%), Gaps = 3/36 (8%)
Frame = +3
Query: 3 MDMG---YDRPQVEQALRASFNNRERAVEYLITGIP 101
+DMG ++R V +ALRA++NN ERA++YL +GIP
Sbjct: 173 LDMGGGTWERDMVVRALRAAYNNPERAIDYLYSGIP 208
>09_04_0070 +
14308446-14308511,14308844-14309005,14309420-14309473,
14310009-14310073,14310391-14310459,14310590-14310767,
14311085-14311231,14311316-14311432,14311507-14311619,
14311703-14311781,14311892-14312020
Length = 392
Score = 99 bits (238), Expect = 2e-21
Identities = 54/131 (41%), Positives = 85/131 (64%), Gaps = 2/131 (1%)
Frame = +3
Query: 162 LRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAG 341
LR+ QF+ + +++Q NP +L +LQ++G+ NP +LQ+I ++Q F+ ++NEP A G
Sbjct: 265 LRNNAQFRTLLSLVQANPQILQPLLQELGKQNPQILQLIQENQAEFLHLINEP----AEG 320
Query: 342 VASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAAN 521
+EN+ D Q P+ Q I V+ ++ EAI RL+A+GF +V+ +FAC K+E LAAN
Sbjct: 321 -DDEENLLD-QFPEAMPQ-TIAVTPEENEAILRLEAMGFDRALVLDVFFACNKDEQLAAN 377
Query: 522 FLLS--QNFDD 548
+LL FDD
Sbjct: 378 YLLDHMNEFDD 388
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +3
Query: 15 YDRPQVEQALRASFNNRERAVEYLITGIP 101
+DR V AL A+FNN ERAVEYL +G+P
Sbjct: 173 WDRDIVLHALSAAFNNPERAVEYLYSGVP 201
>08_02_0751 +
20789843-20789908,20791152-20791313,20791516-20791566,
20792096-20792160,20792385-20792459,20792603-20792780,
20793171-20793353,20793436-20793549,20793627-20793736,
20793826-20793904,20794035-20794172
Length = 406
Score = 99.5 bits (237), Expect = 2e-21
Identities = 50/134 (37%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Frame = +3
Query: 153 LAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPS 332
L LR+ QF+ + +++Q NP +L +LQ++G+ NP +LQ+I ++Q F+R++NEP
Sbjct: 274 LDVLRNNSQFRGLLSLVQANPQILQPLLQELGKQNPQILQLIQENQAEFLRLINEPAE-- 331
Query: 333 AAGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENL 512
++ N+ D Q G + V+ ++ EAI+RL+ +GF +V++ +FAC K+E L
Sbjct: 332 ----GAEGNLLD--QFAAGMPQTVAVTPEENEAIQRLEQMGFDRDLVLEVFFACNKDELL 385
Query: 513 AANFLLS--QNFDD 548
AAN+LL FDD
Sbjct: 386 AANYLLDHMNEFDD 399
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +3
Query: 15 YDRPQVEQALRASFNNRERAVEYLITGIP 101
+DR V +ALRA++NN ERAVEYL TG+P
Sbjct: 174 WDRDTVMRALRAAYNNPERAVEYLYTGVP 202
>02_01_0593 +
4408229-4408294,4408764-4409096,4409756-4409794,
4409870-4409937,4410024-4410068,4410478-4410655,
4410740-4410871,4410941-4411009,4411258-4411305,
4411498-4411545,4411654-4411763,4412044-4412125,
4412232-4412345
Length = 443
Score = 91.1 bits (216), Expect = 8e-19
Identities = 45/123 (36%), Positives = 78/123 (63%)
Frame = +3
Query: 180 FQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVASDEN 359
FQ +R ++ NP +L +LQ++ + NP LL++I ++ + F++++NEP + +D +
Sbjct: 327 FQALREMVHTNPQILQPMLQELSKKNPQLLRLIQENHDEFLQLINEPFD------GADGD 380
Query: 360 VADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLSQN 539
D Q Q + I V+ +++EAI RL+ +GF VI+A+FAC++NE LAAN+LL
Sbjct: 381 FLD-QPDQDEMPHSINVTPEEQEAIGRLEGMGFDRARVIEAFFACDRNEQLAANYLLEHA 439
Query: 540 FDD 548
D+
Sbjct: 440 ADE 442
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/36 (61%), Positives = 30/36 (83%), Gaps = 3/36 (8%)
Frame = +3
Query: 3 MDMG---YDRPQVEQALRASFNNRERAVEYLITGIP 101
M+MG +DR +V++ALRA++NN ERAVEYL +GIP
Sbjct: 211 MEMGGGSWDRDKVQRALRAAYNNPERAVEYLYSGIP 246
>08_02_0129 - 12876477-12876650,12877058-12877150
Length = 88
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 15 YDRPQVEQALRASFNNRERAVEYLITGIP 101
+DR V A RA++NN ERA+EYL TG+P
Sbjct: 6 WDRDTVMSARRAAYNNPERAMEYLYTGVP 34
>02_05_0110 +
25914110-25915006,25915726-25915797,25916411-25916699,
25916864-25916949,25917267-25917490,25917674-25917740,
25917830-25917889,25917995-25918078,25918475-25918555
Length = 619
Score = 32.7 bits (71), Expect = 0.30
Identities = 26/83 (31%), Positives = 41/83 (49%)
Frame = +3
Query: 135 SSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLN 314
+SD A+L +QP F QM +Q+NP+ LN L ++P ++QV+ MLN
Sbjct: 146 ASDPTTRAYL-EQPDFMQMLRDVQRNPSSLNMYL-----SDPRMMQVLG-------LMLN 192
Query: 315 EPVNPSAAGVASDENVADIQQPQ 383
+ A +S + + QPQ
Sbjct: 193 IKIQRPEASESSQPSSSPPSQPQ 215
>11_01_0658 +
5342508-5343602,5343697-5343764,5343994-5344042,
5344217-5344333,5344438-5344506,5344631-5344725,
5345580-5345658,5346499-5346563,5347368-5347461,
5347675-5347744,5348363-5349357
Length = 931
Score = 31.1 bits (67), Expect = 0.91
Identities = 26/95 (27%), Positives = 40/95 (42%)
Frame = +3
Query: 147 DPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVN 326
DP AFL+ Q Q Q + + +QNP A + Q +LQ+ Q Q+ + N P+
Sbjct: 252 DPSAFLQQQQQQQHLLQLTKQNPQAAAAAQLNLLQ-QQRILQMQQQQQQQQQILKNLPLQ 310
Query: 327 PSAAGVASDENVADIQQPQLGSQNVIQVSAQDKEA 431
+ + QQ QL Q + + K A
Sbjct: 311 RNQ---LQQQQQQQQQQQQLLRQQSLNMRTPGKSA 342
>06_01_0675 +
4937309-4937354,4937606-4937718,4937810-4937905,
4938003-4938059,4938145-4938300,4938402-4938486,
4938727-4938817,4938896-4939060,4939150-4939345,
4939593-4939731,4940187-4941874,4942575-4942765,
4942850-4942994
Length = 1055
Score = 31.1 bits (67), Expect = 0.91
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +3
Query: 207 QNPNLLN-AVLQQIGQTNPALLQVISQHQEAFVRMLNEP-VNPSAAGVASDENVADIQQP 380
Q P L + +QQ + ALLQ Q Q+ ++ L++P V +N+ P
Sbjct: 612 QQPTLTQTSQVQQAAEYQQALLQSQQQQQQLQLQQLSQPEVQLQLLQKIQQQNMLSQLNP 671
Query: 381 QLGSQNVIQVSAQDKEAIER 440
Q SQ + Q+S + +E +++
Sbjct: 672 QHQSQLIQQLSQKSQEILQQ 691
>04_04_0639 +
26883810-26883821,26884131-26884307,26885276-26885339,
26886614-26887734,26888193-26888481,26888528-26888658,
26888910-26889133,26889220-26889286,26889744-26889803,
26889896-26889979,26890290-26890301
Length = 746
Score = 31.1 bits (67), Expect = 0.91
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Frame = +3
Query: 168 DQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVA 347
DQP F +M +Q+NP+ LN L ++P ++QV+S + + P P A
Sbjct: 315 DQPDFMRMLRDVQRNPSSLNNYL-----SDPRMVQVLSLMLNLRLPNNDAPPRPPAQSTP 369
Query: 348 SDENVADIQQPQLGSQ------NVIQVSAQDKEAIERLKA 449
QP+ ++ ++V+ ++KE ER A
Sbjct: 370 PPPPQQQQHQPETKAREPEPEPEPMEVTEEEKERKERKAA 409
>12_02_1041 + 25626210-25626595,25628607-25630542,25630572-25630613
Length = 787
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -2
Query: 273 LVIKLDLSDQSAVTQHLTNWDSVE*QHAFAEIVVDLAGRLMGLHQNFLQLLVH 115
L++ +L +V HL N D++ A EIV+ + L+ LHQ Q +VH
Sbjct: 308 LLLVYELMCNGSVESHLYNRDTLLPWPARYEIVLGIGSALLYLHQETEQRVVH 360
>11_01_0657 +
5322295-5323367,5323436-5323555,5323743-5323791,
5323968-5324084,5324200-5324268,5324394-5324488,
5325183-5325521,5327043-5327084,5327814-5327907,
5328121-5328190,5328719-5329677
Length = 1008
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 147 DPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQE 293
DP AFL+ Q Q Q + + +QNP A + Q +LQ+ Q Q+
Sbjct: 243 DPSAFLQQQQQQQHLLQLTKQNPQAAAAAQLNLLQ-QQRILQMQQQQQQ 290
>10_08_0799 -
20650799-20650947,20651022-20651114,20651906-20651934,
20652039-20652097,20652170-20652283,20652374-20652534,
20652544-20652663,20652741-20653469,20654980-20655244
Length = 572
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 174 PQFQQMRAVIQQNPNL----LNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAG 341
P+ QM+ + QNPNL +N + Q NP L++ + + +++ NP A
Sbjct: 156 PELDQMQQQLSQNPNLMREIMNMPMMQNLMNNPDLIRNMIMNNPQMRDIIDR--NPDLAH 213
Query: 342 VASDENV 362
V +D +V
Sbjct: 214 VLNDPSV 220
>02_01_0742 +
5524149-5524214,5524609-5524641,5524750-5524880,
5525174-5525282,5525406-5525522,5525896-5525961,
5526314-5526376,5526459-5526503,5526690-5526751,
5526974-5527067,5527375-5527467,5527561-5527630,
5527816-5527892,5527976-5528033,5528135-5528166,
5528245-5528376
Length = 415
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITG 95
+++G+DR V QAL+ N E+A +L G
Sbjct: 385 VELGFDRASVIQALKLFNGNEEQAAAFLFGG 415
>10_07_0061 + 12489552-12489674,12490761-12490836,12490916-12490980,
12491089-12491166,12492156-12492236,12492813-12492974,
12493328-12493426,12493509-12494797,12495063-12495286,
12495373-12495500,12495596-12495634,12495724-12497178
Length = 1272
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +3
Query: 165 RDQPQFQQMRAVIQQNPNLLNAVLQQIGQT-NPALLQ---VISQHQE 293
+ Q Q QQ + IQQ + + LQQ Q +PA Q V+SQHQ+
Sbjct: 1156 QQQQQQQQQQQQIQQQQQQMGSPLQQAAQVGSPAGSQQSLVMSQHQQ 1202
>02_05_0402 +
28687597-28687671,28688123-28688235,28688927-28689432,
28689544-28689717,28689953-28690082,28692241-28692772,
28693578-28693823,28694648-28695061
Length = 729
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 170 STTISANACCYSTESQFVKCCVTADWSDKSSFITSNQPTSRSL-CQNVK*TSEPFCCGSS 346
S+TI + CC + V CC T S SS + + S SL C TS G++
Sbjct: 188 SSTIQSPCCCANVPLVSVSCCSTGQTSGVSSCMQPSGGCSISLTCDQCPGTSATDSTGAT 247
>01_07_0028 -
40588611-40588718,40588812-40588901,40589966-40590125,
40590547-40590595,40591158-40591338
Length = 195
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 423 KEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLS 533
+E +++L +GFPE MV + +EN+A L S
Sbjct: 158 EEKVQKLVEMGFPEDMVRSVLKSVNGDENMALEKLCS 194
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,629,067
Number of Sequences: 37544
Number of extensions: 238683
Number of successful extensions: 630
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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