Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4828
(715 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC088364-1|AAH88364.1| 362|Homo sapiens RAD23 homolog A (S. cer... 214 3e-55
AB209713-1|BAD92950.1| 379|Homo sapiens UV excision repair prot... 214 3e-55
D21235-1|BAA04767.1| 363|Homo sapiens HHR23A protein protein. 213 5e-55
BC014026-1|AAH14026.1| 363|Homo sapiens RAD23 homolog A (S. cer... 213 5e-55
AF549209-1|AAN39383.1| 363|Homo sapiens RAD23 homolog A (S. cer... 213 5e-55
AD000092-7|AAB51177.1| 363|Homo sapiens human RAD23A homolog pr... 213 5e-55
D21090-1|BAA04652.1| 409|Homo sapiens XP-C repair complementing... 182 7e-55
BC020973-1|AAH20973.1| 409|Homo sapiens RAD23B protein protein. 182 7e-55
AY165178-1|AAN47194.1| 409|Homo sapiens RAD23 homolog B (S. cer... 182 7e-55
AL137852-2|CAD13275.1| 409|Homo sapiens RAD23 homolog B (S. cer... 182 7e-55
AY313777-1|AAP81008.1| 337|Homo sapiens RAD23-like protein B pr... 182 7e-55
AK223479-1|BAD97199.1| 409|Homo sapiens UV excision repair prot... 179 1e-53
AL137852-4|CAH70396.1| 113|Homo sapiens RAD23 homolog B (S. cer... 46 1e-04
U75362-1|AAC63405.1| 863|Homo sapiens isopeptidase T-3 protein. 33 1.3
BC016146-1|AAH16146.1| 863|Homo sapiens ubiquitin specific pept... 33 1.3
X91349-1|CAA62690.1| 858|Homo sapiens de-ubiquitinase protein. 32 2.3
U47927-1|AAC50465.1| 858|Homo sapiens isopeptidase T protein. 32 2.3
U47924-8|AAB51314.1| 835|Homo sapiens isopeptidase T protein. 32 2.3
U47924-7|AAB51315.1| 858|Homo sapiens isopeptidase T protein. 32 2.3
U35116-1|AAA78934.1| 835|Homo sapiens ubiquitin isopeptidase T ... 32 2.3
BC005139-1|AAH05139.1| 858|Homo sapiens USP5 protein protein. 32 2.3
BC004889-1|AAH04889.1| 835|Homo sapiens ubiquitin specific pept... 32 2.3
BC130342-1|AAI30343.1| 776|Homo sapiens glutamine-rich 1 protein. 30 7.2
BC130340-1|AAI30341.1| 776|Homo sapiens glutamine-rich 1 protein. 30 7.2
BC110855-1|AAI10856.1| 776|Homo sapiens glutamine-rich 1 protein. 30 7.2
BC000978-1|AAH00978.2| 748|Homo sapiens QRICH1 protein protein. 30 7.2
AK074313-1|BAB85047.1| 776|Homo sapiens protein ( Homo sapiens ... 30 7.2
Z97054-12|CAI42656.1| 3407|Homo sapiens upstream regulatory elem... 30 9.5
Z97054-10|CAI42654.1| 4374|Homo sapiens upstream regulatory elem... 30 9.5
Z94044-4|CAI42354.1| 4374|Homo sapiens upstream regulatory eleme... 30 9.5
Z94044-3|CAI42353.1| 1672|Homo sapiens upstream regulatory eleme... 30 9.5
DQ097177-1|AAY98258.1| 4374|Homo sapiens Mcl-1 ubiquitin ligase ... 30 9.5
AY929612-1|AAX24125.1| 4374|Homo sapiens LASU1 protein. 30 9.5
AY772009-1|AAV90838.1| 4374|Homo sapiens ARF-binding protein 1 p... 30 9.5
AL592046-4|CAI39581.1| 3407|Homo sapiens upstream regulatory ele... 30 9.5
AL592046-3|CAI39580.1| 4374|Homo sapiens upstream regulatory ele... 30 9.5
AL592046-2|CAI39579.1| 1672|Homo sapiens upstream regulatory ele... 30 9.5
AB071605-1|BAC06833.1| 3360|Homo sapiens HECT domain protein LAS... 30 9.5
AB046798-1|BAB13404.1| 1202|Homo sapiens KIAA1578 protein protein. 30 9.5
AB002310-1|BAA20771.2| 3192|Homo sapiens KIAA0312 protein. 30 9.5
>BC088364-1|AAH88364.1| 362|Homo sapiens RAD23 homolog A (S.
cerevisiae) protein.
Length = 362
Score = 214 bits (522), Expect = 3e-55
Identities = 117/194 (60%), Positives = 134/194 (69%), Gaps = 12/194 (6%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSD----------EDP 152
M MGY+R +V ALRAS+NN RAVEYL+TGIP S E+P
Sbjct: 171 MSMGYERERVVAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSEQPATEAGENP 230
Query: 153 LAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPS 332
L FLRDQPQFQ MR VIQQNP LL A+LQQ+GQ NP LLQ IS+HQE F++MLNEP
Sbjct: 231 LEFLRDQPQFQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGEL 290
Query: 333 A--AGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNE 506
A + V + + PQ+ N IQV+ Q+KEAIERLKALGFPE +VIQAYFACEKNE
Sbjct: 291 ADISDVEGEVGAIGEEAPQM---NYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNE 347
Query: 507 NLAANFLLSQNFDD 548
NLAANFLLSQNFDD
Sbjct: 348 NLAANFLLSQNFDD 361
>AB209713-1|BAD92950.1| 379|Homo sapiens UV excision repair protein
RAD23 homolog A variant protein.
Length = 379
Score = 214 bits (522), Expect = 3e-55
Identities = 117/194 (60%), Positives = 134/194 (69%), Gaps = 12/194 (6%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSD----------EDP 152
M MGY+R +V ALRAS+NN RAVEYL+TGIP S E+P
Sbjct: 188 MSMGYERERVVAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSEQPATEAGENP 247
Query: 153 LAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPS 332
L FLRDQPQFQ MR VIQQNP LL A+LQQ+GQ NP LLQ IS+HQE F++MLNEP
Sbjct: 248 LEFLRDQPQFQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGEL 307
Query: 333 A--AGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNE 506
A + V + + PQ+ N IQV+ Q+KEAIERLKALGFPE +VIQAYFACEKNE
Sbjct: 308 ADISDVEGEVGAIGEEAPQM---NYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNE 364
Query: 507 NLAANFLLSQNFDD 548
NLAANFLLSQNFDD
Sbjct: 365 NLAANFLLSQNFDD 378
>D21235-1|BAA04767.1| 363|Homo sapiens HHR23A protein protein.
Length = 363
Score = 213 bits (520), Expect = 5e-55
Identities = 117/195 (60%), Positives = 134/195 (68%), Gaps = 13/195 (6%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSD-----------ED 149
M MGY+R +V ALRAS+NN RAVEYL+TGIP S E+
Sbjct: 171 MSMGYERERVVAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSEQPATEAAGEN 230
Query: 150 PLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNP 329
PL FLRDQPQFQ MR VIQQNP LL A+LQQ+GQ NP LLQ IS+HQE F++MLNEP
Sbjct: 231 PLEFLRDQPQFQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGE 290
Query: 330 SA--AGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKN 503
A + V + + PQ+ N IQV+ Q+KEAIERLKALGFPE +VIQAYFACEKN
Sbjct: 291 LADISDVEGEVGAIGEEAPQM---NYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKN 347
Query: 504 ENLAANFLLSQNFDD 548
ENLAANFLLSQNFDD
Sbjct: 348 ENLAANFLLSQNFDD 362
>BC014026-1|AAH14026.1| 363|Homo sapiens RAD23 homolog A (S.
cerevisiae) protein.
Length = 363
Score = 213 bits (520), Expect = 5e-55
Identities = 117/195 (60%), Positives = 134/195 (68%), Gaps = 13/195 (6%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSD-----------ED 149
M MGY+R +V ALRAS+NN RAVEYL+TGIP S E+
Sbjct: 171 MSMGYERERVVAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSEQPATEAAGEN 230
Query: 150 PLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNP 329
PL FLRDQPQFQ MR VIQQNP LL A+LQQ+GQ NP LLQ IS+HQE F++MLNEP
Sbjct: 231 PLEFLRDQPQFQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGE 290
Query: 330 SA--AGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKN 503
A + V + + PQ+ N IQV+ Q+KEAIERLKALGFPE +VIQAYFACEKN
Sbjct: 291 LADISDVEGEVGAIGEEAPQM---NYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKN 347
Query: 504 ENLAANFLLSQNFDD 548
ENLAANFLLSQNFDD
Sbjct: 348 ENLAANFLLSQNFDD 362
>AF549209-1|AAN39383.1| 363|Homo sapiens RAD23 homolog A (S.
cerevisiae) protein.
Length = 363
Score = 213 bits (520), Expect = 5e-55
Identities = 117/195 (60%), Positives = 134/195 (68%), Gaps = 13/195 (6%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSD-----------ED 149
M MGY+R +V ALRAS+NN RAVEYL+TGIP S E+
Sbjct: 171 MSMGYERERVVAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSEQPATEAAGEN 230
Query: 150 PLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNP 329
PL FLRDQPQFQ MR VIQQNP LL A+LQQ+GQ NP LLQ IS+HQE F++MLNEP
Sbjct: 231 PLEFLRDQPQFQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGE 290
Query: 330 SA--AGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKN 503
A + V + + PQ+ N IQV+ Q+KEAIERLKALGFPE +VIQAYFACEKN
Sbjct: 291 LADISDVEGEVGAIGEEAPQM---NYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKN 347
Query: 504 ENLAANFLLSQNFDD 548
ENLAANFLLSQNFDD
Sbjct: 348 ENLAANFLLSQNFDD 362
>AD000092-7|AAB51177.1| 363|Homo sapiens human RAD23A homolog
protein.
Length = 363
Score = 213 bits (520), Expect = 5e-55
Identities = 117/195 (60%), Positives = 134/195 (68%), Gaps = 13/195 (6%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSD-----------ED 149
M MGY+R +V ALRAS+NN RAVEYL+TGIP S E+
Sbjct: 171 MSMGYERERVVAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSEQPATEAAGEN 230
Query: 150 PLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNP 329
PL FLRDQPQFQ MR VIQQNP LL A+LQQ+GQ NP LLQ IS+HQE F++MLNEP
Sbjct: 231 PLEFLRDQPQFQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGE 290
Query: 330 SA--AGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKN 503
A + V + + PQ+ N IQV+ Q+KEAIERLKALGFPE +VIQAYFACEKN
Sbjct: 291 LADISDVEGEVGAIGEEAPQM---NYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKN 347
Query: 504 ENLAANFLLSQNFDD 548
ENLAANFLLSQNFDD
Sbjct: 348 ENLAANFLLSQNFDD 362
>D21090-1|BAA04652.1| 409|Homo sapiens XP-C repair complementing
protein (p58/HHR23B) protein.
Length = 409
Score = 182 bits (443), Expect(2) = 7e-55
Identities = 92/139 (66%), Positives = 105/139 (75%), Gaps = 1/139 (0%)
Frame = +3
Query: 135 SSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLN 314
SS PL FLR+QPQFQQMR +IQQNP+LL A+LQQIG+ NP LLQ ISQHQE F++MLN
Sbjct: 270 SSGGHPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLN 329
Query: 315 EPVNPSAA-GVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFA 491
EPV + G I + G N IQV+ Q+KEAIERLKALGFPE +VIQAYFA
Sbjct: 330 EPVQEAGGQGGGGGGGSGGIAEAGSGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFA 389
Query: 492 CEKNENLAANFLLSQNFDD 548
CEKNENLAANFLL QNFD+
Sbjct: 390 CEKNENLAANFLLQQNFDE 408
Score = 52.4 bits (120), Expect(2) = 7e-55
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIP 101
M MGY+R QV ALRASFNN +RAVEYL+ GIP
Sbjct: 198 MSMGYEREQVIAALRASFNNPDRAVEYLLMGIP 230
>BC020973-1|AAH20973.1| 409|Homo sapiens RAD23B protein protein.
Length = 409
Score = 182 bits (443), Expect(2) = 7e-55
Identities = 92/139 (66%), Positives = 105/139 (75%), Gaps = 1/139 (0%)
Frame = +3
Query: 135 SSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLN 314
SS PL FLR+QPQFQQMR +IQQNP+LL A+LQQIG+ NP LLQ ISQHQE F++MLN
Sbjct: 270 SSGGHPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLN 329
Query: 315 EPVNPSAA-GVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFA 491
EPV + G I + G N IQV+ Q+KEAIERLKALGFPE +VIQAYFA
Sbjct: 330 EPVQEAGGQGGGGGGGSGGIAEAGSGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFA 389
Query: 492 CEKNENLAANFLLSQNFDD 548
CEKNENLAANFLL QNFD+
Sbjct: 390 CEKNENLAANFLLQQNFDE 408
Score = 52.4 bits (120), Expect(2) = 7e-55
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIP 101
M MGY+R QV ALRASFNN +RAVEYL+ GIP
Sbjct: 198 MSMGYEREQVIAALRASFNNPDRAVEYLLMGIP 230
>AY165178-1|AAN47194.1| 409|Homo sapiens RAD23 homolog B (S.
cerevisiae) protein.
Length = 409
Score = 182 bits (443), Expect(2) = 7e-55
Identities = 92/139 (66%), Positives = 105/139 (75%), Gaps = 1/139 (0%)
Frame = +3
Query: 135 SSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLN 314
SS PL FLR+QPQFQQMR +IQQNP+LL A+LQQIG+ NP LLQ ISQHQE F++MLN
Sbjct: 270 SSGGHPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLN 329
Query: 315 EPVNPSAA-GVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFA 491
EPV + G I + G N IQV+ Q+KEAIERLKALGFPE +VIQAYFA
Sbjct: 330 EPVQEAGGQGGGGGGGSGGIAEAGSGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFA 389
Query: 492 CEKNENLAANFLLSQNFDD 548
CEKNENLAANFLL QNFD+
Sbjct: 390 CEKNENLAANFLLQQNFDE 408
Score = 52.4 bits (120), Expect(2) = 7e-55
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIP 101
M MGY+R QV ALRASFNN +RAVEYL+ GIP
Sbjct: 198 MSMGYEREQVIAALRASFNNPDRAVEYLLMGIP 230
>AL137852-2|CAD13275.1| 409|Homo sapiens RAD23 homolog B (S.
cerevisiae) protein.
Length = 409
Score = 182 bits (443), Expect(2) = 7e-55
Identities = 92/139 (66%), Positives = 105/139 (75%), Gaps = 1/139 (0%)
Frame = +3
Query: 135 SSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLN 314
SS PL FLR+QPQFQQMR +IQQNP+LL A+LQQIG+ NP LLQ ISQHQE F++MLN
Sbjct: 270 SSGGHPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLN 329
Query: 315 EPVNPSAA-GVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFA 491
EPV + G I + G N IQV+ Q+KEAIERLKALGFPE +VIQAYFA
Sbjct: 330 EPVQEAGGQGGGGGGGSGGIAEAGSGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFA 389
Query: 492 CEKNENLAANFLLSQNFDD 548
CEKNENLAANFLL QNFD+
Sbjct: 390 CEKNENLAANFLLQQNFDE 408
Score = 52.4 bits (120), Expect(2) = 7e-55
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIP 101
M MGY+R QV ALRASFNN +RAVEYL+ GIP
Sbjct: 198 MSMGYEREQVIAALRASFNNPDRAVEYLLMGIP 230
>AY313777-1|AAP81008.1| 337|Homo sapiens RAD23-like protein B
protein.
Length = 337
Score = 182 bits (443), Expect(2) = 7e-55
Identities = 92/139 (66%), Positives = 105/139 (75%), Gaps = 1/139 (0%)
Frame = +3
Query: 135 SSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLN 314
SS PL FLR+QPQFQQMR +IQQNP+LL A+LQQIG+ NP LLQ ISQHQE F++MLN
Sbjct: 198 SSGGHPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLN 257
Query: 315 EPVNPSAA-GVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFA 491
EPV + G I + G N IQV+ Q+KEAIERLKALGFPE +VIQAYFA
Sbjct: 258 EPVQEAGGQGGGGGGGSGGIAEAGSGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFA 317
Query: 492 CEKNENLAANFLLSQNFDD 548
CEKNENLAANFLL QNFD+
Sbjct: 318 CEKNENLAANFLLQQNFDE 336
Score = 52.4 bits (120), Expect(2) = 7e-55
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIP 101
M MGY+R QV ALRASFNN +RAVEYL+ GIP
Sbjct: 126 MSMGYEREQVIAALRASFNNPDRAVEYLLMGIP 158
>AK223479-1|BAD97199.1| 409|Homo sapiens UV excision repair protein
RAD23 homolog B variant protein.
Length = 409
Score = 179 bits (436), Expect(2) = 1e-53
Identities = 91/139 (65%), Positives = 104/139 (74%), Gaps = 1/139 (0%)
Frame = +3
Query: 135 SSDEDPLAFLRDQPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLN 314
SS PL FLR+QPQFQQMR +IQQNP+LL A+LQQIG+ NP LLQ ISQHQE F++MLN
Sbjct: 270 SSGGHPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLN 329
Query: 315 EPVNPSAA-GVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFA 491
EPV + G I + G N IQV+ Q+KEAI RLKALGFPE +VIQAYFA
Sbjct: 330 EPVQEAGGQGGGGGGGSGGIAEAGSGHMNYIQVTPQEKEAIGRLKALGFPEGLVIQAYFA 389
Query: 492 CEKNENLAANFLLSQNFDD 548
CEKNENLAANFLL QNFD+
Sbjct: 390 CEKNENLAANFLLQQNFDE 408
Score = 50.8 bits (116), Expect(2) = 1e-53
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIP 101
M MGY+R QV ALRASFNN +R VEYL+ GIP
Sbjct: 198 MSMGYEREQVIAALRASFNNPDRGVEYLLMGIP 230
>AL137852-4|CAH70396.1| 113|Homo sapiens RAD23 homolog B (S.
cerevisiae) protein.
Length = 113
Score = 46.0 bits (104), Expect = 1e-04
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLI 89
M MGY+R QV ALRASFNN +RAVEYL+
Sbjct: 67 MSMGYEREQVIAALRASFNNPDRAVEYLL 95
>U75362-1|AAC63405.1| 863|Homo sapiens isopeptidase T-3 protein.
Length = 863
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 9 MGYDRPQVEQALRASFNNRERAVEYLIT 92
MG+ R Q QALRA+ NN ERA++++ +
Sbjct: 739 MGFQRNQAIQALRATNNNLERALDWIFS 766
>BC016146-1|AAH16146.1| 863|Homo sapiens ubiquitin specific
peptidase 13 (isopeptidase T-3) protein.
Length = 863
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 9 MGYDRPQVEQALRASFNNRERAVEYLIT 92
MG+ R Q QALRA+ NN ERA++++ +
Sbjct: 739 MGFQRNQAIQALRATNNNLERALDWIFS 766
>X91349-1|CAA62690.1| 858|Homo sapiens de-ubiquitinase protein.
Length = 858
Score = 31.9 bits (69), Expect = 2.3
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGI 98
+ MG+ R Q +ALRA+ N+ ERAV+++ + I
Sbjct: 732 VSMGFSRDQALKALRATNNSLERAVDWIFSHI 763
>U47927-1|AAC50465.1| 858|Homo sapiens isopeptidase T protein.
Length = 858
Score = 31.9 bits (69), Expect = 2.3
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGI 98
+ MG+ R Q +ALRA+ N+ ERAV+++ + I
Sbjct: 732 VSMGFSRDQALKALRATNNSLERAVDWIFSHI 763
>U47924-8|AAB51314.1| 835|Homo sapiens isopeptidase T protein.
Length = 835
Score = 31.9 bits (69), Expect = 2.3
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGI 98
+ MG+ R Q +ALRA+ N+ ERAV+++ + I
Sbjct: 709 VSMGFSRDQALKALRATNNSLERAVDWIFSHI 740
>U47924-7|AAB51315.1| 858|Homo sapiens isopeptidase T protein.
Length = 858
Score = 31.9 bits (69), Expect = 2.3
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGI 98
+ MG+ R Q +ALRA+ N+ ERAV+++ + I
Sbjct: 732 VSMGFSRDQALKALRATNNSLERAVDWIFSHI 763
>U35116-1|AAA78934.1| 835|Homo sapiens ubiquitin isopeptidase T
protein.
Length = 835
Score = 31.9 bits (69), Expect = 2.3
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGI 98
+ MG+ R Q +ALRA+ N+ ERAV+++ + I
Sbjct: 709 VSMGFSRDQALKALRATNNSLERAVDWIFSHI 740
>BC005139-1|AAH05139.1| 858|Homo sapiens USP5 protein protein.
Length = 858
Score = 31.9 bits (69), Expect = 2.3
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGI 98
+ MG+ R Q +ALRA+ N+ ERAV+++ + I
Sbjct: 732 VSMGFSRDQALKALRATNNSLERAVDWIFSHI 763
>BC004889-1|AAH04889.1| 835|Homo sapiens ubiquitin specific
peptidase 5 (isopeptidase T) protein.
Length = 835
Score = 31.9 bits (69), Expect = 2.3
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGI 98
+ MG+ R Q +ALRA+ N+ ERAV+++ + I
Sbjct: 709 VSMGFSRDQALKALRATNNSLERAVDWIFSHI 740
>BC130342-1|AAI30343.1| 776|Homo sapiens glutamine-rich 1 protein.
Length = 776
Score = 30.3 bits (65), Expect = 7.2
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +3
Query: 171 QPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVAS 350
QPQ Q++ +QQ+P ++A Q +P L + Q E +++ + + A
Sbjct: 98 QPQQVQVQVQVQQSPQQVSA------QLSPQL--TVHQPTEQPIQVQVQIQGQAPQSAAP 149
Query: 351 DENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPE----HMVIQA 482
+Q P Q+ Q +A ++++A PE H IQA
Sbjct: 150 SIQTPSLQSPSPSQLQAAQIQVQHVQAAQQIQAAEIPEEHIPHQQIQA 197
>BC130340-1|AAI30341.1| 776|Homo sapiens glutamine-rich 1 protein.
Length = 776
Score = 30.3 bits (65), Expect = 7.2
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +3
Query: 171 QPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVAS 350
QPQ Q++ +QQ+P ++A Q +P L + Q E +++ + + A
Sbjct: 98 QPQQVQVQVQVQQSPQQVSA------QLSPQL--TVHQPTEQPIQVQVQIQGQAPQSAAP 149
Query: 351 DENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPE----HMVIQA 482
+Q P Q+ Q +A ++++A PE H IQA
Sbjct: 150 SIQTPSLQSPSPSQLQAAQIQVQHVQAAQQIQAAEIPEEHIPHQQIQA 197
>BC110855-1|AAI10856.1| 776|Homo sapiens glutamine-rich 1 protein.
Length = 776
Score = 30.3 bits (65), Expect = 7.2
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +3
Query: 171 QPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVAS 350
QPQ Q++ +QQ+P ++A Q +P L + Q E +++ + + A
Sbjct: 98 QPQQVQVQVQVQQSPQQVSA------QLSPQL--TVHQPTEQPIQVQVQIQGQAPQSAAP 149
Query: 351 DENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPE----HMVIQA 482
+Q P Q+ Q +A ++++A PE H IQA
Sbjct: 150 SIQTPSLQSPSPSQLQAAQIQVQHVQAAQQIQAAEIPEEHIPHQQIQA 197
>BC000978-1|AAH00978.2| 748|Homo sapiens QRICH1 protein protein.
Length = 748
Score = 30.3 bits (65), Expect = 7.2
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +3
Query: 171 QPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVAS 350
QPQ Q++ +QQ+P ++A Q +P L + Q E +++ + + A
Sbjct: 70 QPQQVQVQVQVQQSPQQVSA------QLSPQL--TVHQPTEQPIQVQVQIQGQAPQSAAP 121
Query: 351 DENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPE----HMVIQA 482
+Q P Q+ Q +A ++++A PE H IQA
Sbjct: 122 SIQTPSLQSPSPSQLQAAQIQVQHVQAAQQIQAAEIPEEHIPHQQIQA 169
>AK074313-1|BAB85047.1| 776|Homo sapiens protein ( Homo sapiens
cDNA FLJ23733 fis, clone HEP14786. ).
Length = 776
Score = 30.3 bits (65), Expect = 7.2
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +3
Query: 171 QPQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVAS 350
QPQ Q++ +QQ+P ++A Q +P L + Q E +++ + + A
Sbjct: 98 QPQQVQVQVQVQQSPQQVSA------QLSPQL--TVHQPTEQPIQVQVQIQGQAPQSAAP 149
Query: 351 DENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPE----HMVIQA 482
+Q P Q+ Q +A ++++A PE H IQA
Sbjct: 150 SIQTPSLQSPSPSQLQAAQIQVQHVQAAQQIQAAEIPEEHIPHQQIQA 197
>Z97054-12|CAI42656.1| 3407|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 3407
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSDEDPL 155
MDMG+ R +AL + + E+A EYL+T P S+ED +
Sbjct: 359 MDMGFTREHAMEAL-LNTSTMEQATEYLLTHPPPIMGGVVRDLSMSEEDQM 408
>Z97054-10|CAI42654.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSDEDPL 155
MDMG+ R +AL + + E+A EYL+T P S+ED +
Sbjct: 1326 MDMGFTREHAMEAL-LNTSTMEQATEYLLTHPPPIMGGVVRDLSMSEEDQM 1375
>Z94044-4|CAI42354.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSDEDPL 155
MDMG+ R +AL + + E+A EYL+T P S+ED +
Sbjct: 1326 MDMGFTREHAMEAL-LNTSTMEQATEYLLTHPPPIMGGVVRDLSMSEEDQM 1375
>Z94044-3|CAI42353.1| 1672|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 1672
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSDEDPL 155
MDMG+ R +AL + + E+A EYL+T P S+ED +
Sbjct: 1326 MDMGFTREHAMEAL-LNTSTMEQATEYLLTHPPPIMGGVVRDLSMSEEDQM 1375
>DQ097177-1|AAY98258.1| 4374|Homo sapiens Mcl-1 ubiquitin ligase
protein.
Length = 4374
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSDEDPL 155
MDMG+ R +AL + + E+A EYL+T P S+ED +
Sbjct: 1326 MDMGFTREHAMEAL-LNTSTMEQATEYLLTHPPPIMGGVVRDLSMSEEDQM 1375
>AY929612-1|AAX24125.1| 4374|Homo sapiens LASU1 protein.
Length = 4374
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSDEDPL 155
MDMG+ R +AL + + E+A EYL+T P S+ED +
Sbjct: 1326 MDMGFTREHAMEAL-LNTSTMEQATEYLLTHPPPIMGGVVRDLSMSEEDQM 1375
>AY772009-1|AAV90838.1| 4374|Homo sapiens ARF-binding protein 1
protein.
Length = 4374
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSDEDPL 155
MDMG+ R +AL + + E+A EYL+T P S+ED +
Sbjct: 1326 MDMGFTREHAMEAL-LNTSTMEQATEYLLTHPPPIMGGVVRDLSMSEEDQM 1375
>AL592046-4|CAI39581.1| 3407|Homo sapiens upstream regulatory
element binding protein 1 (UREB1) protein.
Length = 3407
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSDEDPL 155
MDMG+ R +AL + + E+A EYL+T P S+ED +
Sbjct: 359 MDMGFTREHAMEAL-LNTSTMEQATEYLLTHPPPIMGGVVRDLSMSEEDQM 408
>AL592046-3|CAI39580.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSDEDPL 155
MDMG+ R +AL + + E+A EYL+T P S+ED +
Sbjct: 1326 MDMGFTREHAMEAL-LNTSTMEQATEYLLTHPPPIMGGVVRDLSMSEEDQM 1375
>AL592046-2|CAI39579.1| 1672|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 1672
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSDEDPL 155
MDMG+ R +AL + + E+A EYL+T P S+ED +
Sbjct: 1326 MDMGFTREHAMEAL-LNTSTMEQATEYLLTHPPPIMGGVVRDLSMSEEDQM 1375
>AB071605-1|BAC06833.1| 3360|Homo sapiens HECT domain protein LASU1
protein.
Length = 3360
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSDEDPL 155
MDMG+ R +AL + + E+A EYL+T P S+ED +
Sbjct: 312 MDMGFTREHAMEAL-LNTSTMEQATEYLLTHPPPIMGGVVRDLSMSEEDQM 361
>AB046798-1|BAB13404.1| 1202|Homo sapiens KIAA1578 protein protein.
Length = 1202
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSDEDPL 155
MDMG+ R +AL + + E+A EYL+T P S+ED +
Sbjct: 81 MDMGFTREHAMEAL-LNTSTMEQATEYLLTHPPPIMGGVVRDLSMSEEDQM 130
>AB002310-1|BAA20771.2| 3192|Homo sapiens KIAA0312 protein.
Length = 3192
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSDEDPL 155
MDMG+ R +AL + + E+A EYL+T P S+ED +
Sbjct: 161 MDMGFTREHAMEAL-LNTSTMEQATEYLLTHPPPIMGGVVRDLSMSEEDQM 210
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,113,038
Number of Sequences: 237096
Number of extensions: 1448110
Number of successful extensions: 6879
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 6710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6856
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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