BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4828
(715 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089339-1|AAL90077.1| 290|Drosophila melanogaster AT15685p pro... 107 1e-23
AE014297-3457|AAF56234.1| 290|Drosophila melanogaster CG10694-P... 107 1e-23
AF136606-1|AAD33695.1| 414|Drosophila melanogaster DHR23 protein. 104 1e-22
AF132147-1|AAD33594.1| 414|Drosophila melanogaster DNA repair p... 104 1e-22
AE014135-61|AAN06526.1| 343|Drosophila melanogaster CG1836-PB, ... 104 1e-22
AE014135-60|AAF59352.1| 414|Drosophila melanogaster CG1836-PA, ... 104 1e-22
AE014298-2740|AAF48860.1| 174|Drosophila melanogaster CG15047-P... 33 0.51
BT023777-1|AAZ41786.1| 905|Drosophila melanogaster LD29489p pro... 32 0.89
AY119467-1|AAM50121.1| 581|Drosophila melanogaster GH04034p pro... 32 0.89
AE014297-544|AAF54074.3| 905|Drosophila melanogaster CG1965-PA ... 32 0.89
BT001611-1|AAN71366.1| 697|Drosophila melanogaster RE32656p pro... 31 1.2
AY061473-1|AAL29021.1| 495|Drosophila melanogaster LD44032p pro... 31 1.6
AE014297-686|AAF54178.1| 495|Drosophila melanogaster CG10435-PA... 31 1.6
BT030410-1|ABO52830.1| 592|Drosophila melanogaster IP08946p pro... 30 3.6
BT015224-1|AAT94453.1| 697|Drosophila melanogaster RE33368p pro... 30 3.6
AE014297-3614|AAN14015.2| 697|Drosophila melanogaster CG13627-P... 30 3.6
AE014297-3613|AAF56325.1| 697|Drosophila melanogaster CG13627-P... 30 3.6
AE014297-2368|AAF55432.1| 277|Drosophila melanogaster CG5829-PA... 30 3.6
AY118677-1|AAM50537.1| 614|Drosophila melanogaster AT07671p pro... 29 4.7
AE014297-3811|AAF56476.1| 614|Drosophila melanogaster CG5111-PA... 29 4.7
AY121697-1|AAM52024.1| 827|Drosophila melanogaster RE70722p pro... 29 8.3
AE014296-568|AAF47720.1| 827|Drosophila melanogaster CG12082-PA... 29 8.3
>AY089339-1|AAL90077.1| 290|Drosophila melanogaster AT15685p
protein.
Length = 290
Score = 107 bits (257), Expect = 1e-23
Identities = 66/185 (35%), Positives = 100/185 (54%), Gaps = 3/185 (1%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSD---EDPLAFLRDQ 173
M MGY +V ALRASFN+ ERA+EYLI GIP D L L
Sbjct: 119 MSMGYGEEEVRSALRASFNHPERAIEYLINGIPQEVVSEQGLAAIPSVQTSDQLQQLMAD 178
Query: 174 PQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVASD 353
+MR +I QNP L++ ++ ++ +T+PA +V ++QE + M++ G +
Sbjct: 179 LNITRMREMINQNPELIHRLMNRLAETDPATFEVFQRNQEELMNMIS-------GGASRT 231
Query: 354 ENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLS 533
N +I+ Q I ++A++ A+ RL+ALGF M +QAY AC+K+E LAA L+
Sbjct: 232 PN--EIEHLQ------ITLTAEETAAVGRLEALGFERVMAVQAYLACDKDEQLAAEVLIR 283
Query: 534 QNFDD 548
Q+ +D
Sbjct: 284 QSEED 288
>AE014297-3457|AAF56234.1| 290|Drosophila melanogaster CG10694-PA
protein.
Length = 290
Score = 107 bits (257), Expect = 1e-23
Identities = 66/185 (35%), Positives = 100/185 (54%), Gaps = 3/185 (1%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSD---EDPLAFLRDQ 173
M MGY +V ALRASFN+ ERA+EYLI GIP D L L
Sbjct: 119 MSMGYGEEEVRSALRASFNHPERAIEYLINGIPQEVVSEQGLAAIPSVQTSDQLQQLMAD 178
Query: 174 PQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVASD 353
+MR +I QNP L++ ++ ++ +T+PA +V ++QE + M++ G +
Sbjct: 179 LNITRMREMINQNPELIHRLMNRLAETDPATFEVFQRNQEELMNMIS-------GGASRT 231
Query: 354 ENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLAANFLLS 533
N +I+ Q I ++A++ A+ RL+ALGF M +QAY AC+K+E LAA L+
Sbjct: 232 PN--EIEHLQ------ITLTAEETAAVGRLEALGFERVMAVQAYLACDKDEQLAAEVLIR 283
Query: 534 QNFDD 548
Q+ +D
Sbjct: 284 QSEED 288
>AF136606-1|AAD33695.1| 414|Drosophila melanogaster DHR23 protein.
Length = 414
Score = 104 bits (250), Expect = 1e-22
Identities = 65/150 (43%), Positives = 87/150 (58%), Gaps = 24/150 (16%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSDEDPLAFLRDQP-- 176
++MGY R QVE+A+ AS+NN ERAVEYLI GIP S L QP
Sbjct: 167 VEMGYPREQVERAMAASYNNPERAVEYLINGIPAEEGTFYNRLNESTNPSLIPSGPQPAS 226
Query: 177 ----------------------QFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQ 290
QF QMR++I QNP+LL+AVLQQIGQTNPALLQ+IS++Q
Sbjct: 227 ATSAERSTESNSDPFEFLRSQPQFLQMRSLIYQNPHLLHAVLQQIGQTNPALLQLISENQ 286
Query: 291 EAFVRMLNEPVNPSAAGVASDENVADIQQP 380
+AF+ MLN+P++ + A+ V++ + P
Sbjct: 287 DAFLNMLNQPIDRESESGATVPPVSNARIP 316
Score = 85.4 bits (202), Expect = 7e-17
Identities = 44/71 (61%), Positives = 57/71 (80%)
Frame = +3
Query: 336 AGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLA 515
+G A+D D++QP LG + I+++ QDK+AIERLKALGFPE +V+QAYFACEKNE A
Sbjct: 348 SGSAADNE--DLEQP-LGV-STIRLNRQDKDAIERLKALGFPEALVLQAYFACEKNEEQA 403
Query: 516 ANFLLSQNFDD 548
ANFLLS +F+D
Sbjct: 404 ANFLLSSSFED 414
>AF132147-1|AAD33594.1| 414|Drosophila melanogaster DNA repair
protein Rad23 protein.
Length = 414
Score = 104 bits (250), Expect = 1e-22
Identities = 65/150 (43%), Positives = 87/150 (58%), Gaps = 24/150 (16%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSDEDPLAFLRDQP-- 176
++MGY R QVE+A+ AS+NN ERAVEYLI GIP S L QP
Sbjct: 167 VEMGYPREQVERAMAASYNNPERAVEYLINGIPAEEGTFYNRLNESTNPSLIPSGPQPAS 226
Query: 177 ----------------------QFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQ 290
QF QMR++I QNP+LL+AVLQQIGQTNPALLQ+IS++Q
Sbjct: 227 ATSAERSTESNSDPFEFLRSQPQFLQMRSLIYQNPHLLHAVLQQIGQTNPALLQLISENQ 286
Query: 291 EAFVRMLNEPVNPSAAGVASDENVADIQQP 380
+AF+ MLN+P++ + A+ V++ + P
Sbjct: 287 DAFLNMLNQPIDRESESGATVPPVSNARIP 316
Score = 87.0 bits (206), Expect = 2e-17
Identities = 45/71 (63%), Positives = 57/71 (80%)
Frame = +3
Query: 336 AGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLA 515
+G A+D D++QP LG + I+++ QDK+AIERLKALGFPE +V+QAYFACEKNE A
Sbjct: 348 SGSAADNE--DLEQP-LGV-STIRLNRQDKDAIERLKALGFPEALVLQAYFACEKNEEQA 403
Query: 516 ANFLLSQNFDD 548
ANFLLS +FDD
Sbjct: 404 ANFLLSSSFDD 414
>AE014135-61|AAN06526.1| 343|Drosophila melanogaster CG1836-PB,
isoform B protein.
Length = 343
Score = 104 bits (250), Expect = 1e-22
Identities = 65/150 (43%), Positives = 87/150 (58%), Gaps = 24/150 (16%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSDEDPLAFLRDQP-- 176
++MGY R QVE+A+ AS+NN ERAVEYLI GIP S L QP
Sbjct: 96 VEMGYPREQVERAMAASYNNPERAVEYLINGIPAEEGTFYNRLNESTNPSLIPSGPQPAS 155
Query: 177 ----------------------QFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQ 290
QF QMR++I QNP+LL+AVLQQIGQTNPALLQ+IS++Q
Sbjct: 156 ATSAERSTESNSDPFEFLRSQPQFLQMRSLIYQNPHLLHAVLQQIGQTNPALLQLISENQ 215
Query: 291 EAFVRMLNEPVNPSAAGVASDENVADIQQP 380
+AF+ MLN+P++ + A+ V++ + P
Sbjct: 216 DAFLNMLNQPIDRESESGATVPPVSNARIP 245
Score = 87.0 bits (206), Expect = 2e-17
Identities = 45/71 (63%), Positives = 57/71 (80%)
Frame = +3
Query: 336 AGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLA 515
+G A+D D++QP LG + I+++ QDK+AIERLKALGFPE +V+QAYFACEKNE A
Sbjct: 277 SGSAADNE--DLEQP-LGV-STIRLNRQDKDAIERLKALGFPEALVLQAYFACEKNEEQA 332
Query: 516 ANFLLSQNFDD 548
ANFLLS +FDD
Sbjct: 333 ANFLLSSSFDD 343
>AE014135-60|AAF59352.1| 414|Drosophila melanogaster CG1836-PA,
isoform A protein.
Length = 414
Score = 104 bits (250), Expect = 1e-22
Identities = 65/150 (43%), Positives = 87/150 (58%), Gaps = 24/150 (16%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGIPXXXXXXXXXXXSSDEDPLAFLRDQP-- 176
++MGY R QVE+A+ AS+NN ERAVEYLI GIP S L QP
Sbjct: 167 VEMGYPREQVERAMAASYNNPERAVEYLINGIPAEEGTFYNRLNESTNPSLIPSGPQPAS 226
Query: 177 ----------------------QFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQ 290
QF QMR++I QNP+LL+AVLQQIGQTNPALLQ+IS++Q
Sbjct: 227 ATSAERSTESNSDPFEFLRSQPQFLQMRSLIYQNPHLLHAVLQQIGQTNPALLQLISENQ 286
Query: 291 EAFVRMLNEPVNPSAAGVASDENVADIQQP 380
+AF+ MLN+P++ + A+ V++ + P
Sbjct: 287 DAFLNMLNQPIDRESESGATVPPVSNARIP 316
Score = 87.0 bits (206), Expect = 2e-17
Identities = 45/71 (63%), Positives = 57/71 (80%)
Frame = +3
Query: 336 AGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFACEKNENLA 515
+G A+D D++QP LG + I+++ QDK+AIERLKALGFPE +V+QAYFACEKNE A
Sbjct: 348 SGSAADNE--DLEQP-LGV-STIRLNRQDKDAIERLKALGFPEALVLQAYFACEKNEEQA 403
Query: 516 ANFLLSQNFDD 548
ANFLLS +FDD
Sbjct: 404 ANFLLSSSFDD 414
>AE014298-2740|AAF48860.1| 174|Drosophila melanogaster CG15047-PA
protein.
Length = 174
Score = 32.7 bits (71), Expect = 0.51
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLITGI 98
MDMGY + AL S NN +RAV+ L+ G+
Sbjct: 46 MDMGYPEGEARLALAQSNNNVQRAVQILVEGM 77
>BT023777-1|AAZ41786.1| 905|Drosophila melanogaster LD29489p
protein.
Length = 905
Score = 31.9 bits (69), Expect = 0.89
Identities = 17/68 (25%), Positives = 36/68 (52%)
Frame = +3
Query: 303 RMLNEPVNPSAAGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQA 482
R N+ ++ G++SD+ +AD QQ +L + Q+ +Q +A+E + +++
Sbjct: 567 RERNDLLSSHLDGMSSDDEIAD-QQQELSVTTMAQIESQSVDALEDVTDDFSKIELILMK 625
Query: 483 YFACEKNE 506
+FA K +
Sbjct: 626 FFAWRKTD 633
>AY119467-1|AAM50121.1| 581|Drosophila melanogaster GH04034p
protein.
Length = 581
Score = 31.9 bits (69), Expect = 0.89
Identities = 17/68 (25%), Positives = 36/68 (52%)
Frame = +3
Query: 303 RMLNEPVNPSAAGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQA 482
R N+ ++ G++SD+ +AD QQ +L + Q+ +Q +A+E + +++
Sbjct: 243 RERNDLLSSHLDGMSSDDEIAD-QQQELSVTTMAQIESQSVDALEDVTDDFSKIELILMK 301
Query: 483 YFACEKNE 506
+FA K +
Sbjct: 302 FFAWRKTD 309
>AE014297-544|AAF54074.3| 905|Drosophila melanogaster CG1965-PA
protein.
Length = 905
Score = 31.9 bits (69), Expect = 0.89
Identities = 17/68 (25%), Positives = 36/68 (52%)
Frame = +3
Query: 303 RMLNEPVNPSAAGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQA 482
R N+ ++ G++SD+ +AD QQ +L + Q+ +Q +A+E + +++
Sbjct: 567 RERNDLLSSHLDGMSSDDEIAD-QQQELSVTTMAQIESQSVDALEDVTDDFSKIELILMK 625
Query: 483 YFACEKNE 506
+FA K +
Sbjct: 626 FFAWRKTD 633
>BT001611-1|AAN71366.1| 697|Drosophila melanogaster RE32656p
protein.
Length = 697
Score = 31.5 bits (68), Expect = 1.2
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Frame = +3
Query: 165 RDQPQFQQMRAV-----IQQNPNLLNAVLQQIGQTNPALLQVISQHQ-EAFVRMLNEPVN 326
+ Q QF++++A +QQ L Q+ Q L Q + H + + + V
Sbjct: 548 QQQQQFEELQAQAQEQHLQQQHQQHQLQLLQLQQQQQQLQQPVQHHPPQQLQQQQQQQVA 607
Query: 327 PSAAGVASDENVADIQQPQLGSQNVIQVSAQDKEAIE 437
A A +E+ +QQ QLG+ +++ A D+EA E
Sbjct: 608 QDPAASAFEEHQRLVQQ-QLGANTPLRIFAPDEEAAE 643
>AY061473-1|AAL29021.1| 495|Drosophila melanogaster LD44032p
protein.
Length = 495
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLI 89
+D+G+D ++ AL NN+++A++YLI
Sbjct: 466 LDLGFDESKISAALLKFNNNKDKALDYLI 494
>AE014297-686|AAF54178.1| 495|Drosophila melanogaster CG10435-PA
protein.
Length = 495
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLI 89
+D+G+D ++ AL NN+++A++YLI
Sbjct: 466 LDLGFDESKISAALLKFNNNKDKALDYLI 494
>BT030410-1|ABO52830.1| 592|Drosophila melanogaster IP08946p
protein.
Length = 592
Score = 29.9 bits (64), Expect = 3.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 210 NPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPV 323
+P LL L GQ LQV QHQ++ V L+ P+
Sbjct: 122 HPALLQHALTPTGQQQQQQLQVQQQHQQSHVERLSPPM 159
>BT015224-1|AAT94453.1| 697|Drosophila melanogaster RE33368p
protein.
Length = 697
Score = 29.9 bits (64), Expect = 3.6
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Frame = +3
Query: 165 RDQPQFQQMRAV-----IQQNPNLLNAVLQQIGQTNPALLQVISQHQ-EAFVRMLNEPVN 326
+ Q QF++++A +QQ L Q+ Q L Q + H + + + V
Sbjct: 548 QQQQQFEELQAQAQEQHLQQQHQQHQLQLLQLQQQQQQLQQPVQHHPPQQLQQQQQQQVA 607
Query: 327 PSAAGVASDENVADIQQPQLGSQNVIQVSAQDKEAIE 437
A A +E+ +QQ QLG+ +++ D+EA E
Sbjct: 608 QDPAASAFEEHQRLVQQ-QLGANTPLRIFVPDEEAAE 643
>AE014297-3614|AAN14015.2| 697|Drosophila melanogaster CG13627-PB,
isoform B protein.
Length = 697
Score = 29.9 bits (64), Expect = 3.6
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Frame = +3
Query: 165 RDQPQFQQMRAV-----IQQNPNLLNAVLQQIGQTNPALLQVISQHQ-EAFVRMLNEPVN 326
+ Q QF++++A +QQ L Q+ Q L Q + H + + + V
Sbjct: 548 QQQQQFEELQAQAQEQHLQQQHQQHQLQLLQLQQQQQQLQQPVQHHPPQQLQQQQQQQVA 607
Query: 327 PSAAGVASDENVADIQQPQLGSQNVIQVSAQDKEAIE 437
A A +E+ +QQ QLG+ +++ D+EA E
Sbjct: 608 QDPAASAFEEHQRLVQQ-QLGANTPLRIFVPDEEAAE 643
>AE014297-3613|AAF56325.1| 697|Drosophila melanogaster CG13627-PA,
isoform A protein.
Length = 697
Score = 29.9 bits (64), Expect = 3.6
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Frame = +3
Query: 165 RDQPQFQQMRAV-----IQQNPNLLNAVLQQIGQTNPALLQVISQHQ-EAFVRMLNEPVN 326
+ Q QF++++A +QQ L Q+ Q L Q + H + + + V
Sbjct: 548 QQQQQFEELQAQAQEQHLQQQHQQHQLQLLQLQQQQQQLQQPVQHHPPQQLQQQQQQQVA 607
Query: 327 PSAAGVASDENVADIQQPQLGSQNVIQVSAQDKEAIE 437
A A +E+ +QQ QLG+ +++ D+EA E
Sbjct: 608 QDPAASAFEEHQRLVQQ-QLGANTPLRIFVPDEEAAE 643
>AE014297-2368|AAF55432.1| 277|Drosophila melanogaster CG5829-PA
protein.
Length = 277
Score = 29.9 bits (64), Expect = 3.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 210 NPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPV 323
+P LL L GQ LQV QHQ++ V L+ P+
Sbjct: 122 HPALLQHALTPTGQQQQQQLQVQQQHQQSHVERLSPPM 159
>AY118677-1|AAM50537.1| 614|Drosophila melanogaster AT07671p
protein.
Length = 614
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYL 86
M+MGY+R V +AL+ + NN +R+++ L
Sbjct: 431 MEMGYERRLVVEALKRTKNNLDRSLDLL 458
>AE014297-3811|AAF56476.1| 614|Drosophila melanogaster CG5111-PA
protein.
Length = 614
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYL 86
M+MGY+R V +AL+ + NN +R+++ L
Sbjct: 431 MEMGYERRLVVEALKRTKNNLDRSLDLL 458
>AY121697-1|AAM52024.1| 827|Drosophila melanogaster RE70722p
protein.
Length = 827
Score = 28.7 bits (61), Expect = 8.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLIT 92
M MG+D Q AL+A+ N ERA +++ +
Sbjct: 705 MSMGFDERQAVAALKATDGNVERATDWIFS 734
>AE014296-568|AAF47720.1| 827|Drosophila melanogaster CG12082-PA
protein.
Length = 827
Score = 28.7 bits (61), Expect = 8.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 3 MDMGYDRPQVEQALRASFNNRERAVEYLIT 92
M MG+D Q AL+A+ N ERA +++ +
Sbjct: 705 MSMGFDERQAVAALKATDGNVERATDWIFS 734
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,004,360
Number of Sequences: 53049
Number of extensions: 456317
Number of successful extensions: 1193
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -