Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4826
(566 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 32 0.067
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.48
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 26 4.4
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 26 4.4
SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual 25 7.7
SPAC607.05 |rpn9||19S proteasome regulatory subunit Rpn9|Schizos... 25 7.7
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 31.9 bits (69), Expect = 0.067
Identities = 18/81 (22%), Positives = 45/81 (55%)
Frame = -3
Query: 564 ASKEITSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALI 385
+S +S +P + V S S++ +T ++ ++ +++S + +P ++LITA
Sbjct: 688 SSPVASSSSSPIPSSSSLVSTYSASLSNITHSSLSLT-AMSSSSAIPTSVNSSTLITASS 746
Query: 384 SALVTTIVTSKTALITLTRIT 322
S + + +TS +A+++ T ++
Sbjct: 747 SNTLLSSITSSSAIVSSTTVS 767
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 29.1 bits (62), Expect = 0.48
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSV--ARVTGTAALISGSVTSIARVP*-KTTEASLITALISA 379
T V P+ + VL S + + V T+ I+ S + P +T + T + S+
Sbjct: 3256 TVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTTLNTSTPITSS 3315
Query: 378 LV---TTIVTSKTALITLTRITETGVAVT*TGIS 286
V +T +TS TAL T T IT + V + T I+
Sbjct: 3316 SVLNSSTAITSSTALNTSTPITSSSVLNSSTAIT 3349
Score = 28.7 bits (61), Expect = 0.63
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = -3
Query: 552 ITSVGRGVPVETGPVLVVSRSV--ARVTGTAALISGSVTSIARVP*KTTEA-SLITALIS 382
+T++ P+ + VL S + + V T+ I+ S + P ++ A + T + S
Sbjct: 2571 LTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITS 2630
Query: 381 ALV---TTIVTSKTALITLTRITETGVAVT*TGIS 286
+ V +T +TS TAL T T IT + V + T I+
Sbjct: 2631 SSVLNSSTPITSSTALNTSTSITSSSVLNSSTPIT 2665
Score = 27.9 bits (59), Expect = 1.1
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSVARVTG---TAALISGSVTSIARVP*KTTEASLITALISA 379
T++ P+ + VL S + T + + S SV + + +T + T + S+
Sbjct: 664 TALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTAITSSTALNTSTPITSS 723
Query: 378 LV---TTIVTSKTALITLTRITETGVAVT*TGIS 286
V +T +TS TAL T T IT + V + T I+
Sbjct: 724 SVLNSSTPITSSTALNTSTPITSSSVLNSSTPIT 757
Score = 27.9 bits (59), Expect = 1.1
Identities = 26/88 (29%), Positives = 43/88 (48%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVT 370
T++ P+ + VL S +T + AL + + + + V +T + T L S+
Sbjct: 1852 TALNTSTPITSSSVL---NSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSS--- 1905
Query: 369 TIVTSKTALITLTRITETGVAVT*TGIS 286
T +TS TAL T T IT + V + T I+
Sbjct: 1906 TPITSSTALNTSTPITSSSVLNSSTPIT 1933
Score = 27.9 bits (59), Expect = 1.1
Identities = 26/88 (29%), Positives = 43/88 (48%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVT 370
T++ P+ + VL S +T + AL + + + + V +T + T L S+
Sbjct: 2044 TALNTSTPITSSSVL---NSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSS--- 2097
Query: 369 TIVTSKTALITLTRITETGVAVT*TGIS 286
T +TS TAL T T IT + V + T I+
Sbjct: 2098 TPITSSTALNTSTPITSSSVLNSSTPIT 2125
Score = 27.9 bits (59), Expect = 1.1
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSV--ARVTGTAALISGSVTSIARVP*KTTEA-SLITALISA 379
T V P+ + VL S + + V T+ I+ S + P ++ A + T + S+
Sbjct: 2896 TVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSS 2955
Query: 378 LV---TTIVTSKTALITLTRITETGVAVT*TGIS 286
V +T +TS TAL T T IT + V + T I+
Sbjct: 2956 SVLNSSTPITSSTALNTSTSITSSSVLNSSTPIT 2989
Score = 27.5 bits (58), Expect = 1.5
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSVARVTG---TAALISGSVTSIARVP*KTTEASLITALISA 379
T V P+ + VL S + T + + S SV + + +T + T + S+
Sbjct: 844 TVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSS 903
Query: 378 LV---TTIVTSKTALITLTRITETGVAVT*TGIS 286
V +T +TS TAL T T IT + V + T I+
Sbjct: 904 TVVNSSTPITSSTALNTSTPITSSSVLNSSTPIT 937
Score = 27.5 bits (58), Expect = 1.5
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSVARVTG---TAALISGSVTSIARVP*KTTEASLITALISA 379
T++ P+ + VL S + T + + S SV + + +T + T + S+
Sbjct: 1780 TALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSS 1839
Query: 378 LV---TTIVTSKTALITLTRITETGVAVT*TGIS 286
V +T +TS TAL T T IT + V + T I+
Sbjct: 1840 TVVNSSTPITSSTALNTSTPITSSSVLNSSTPIT 1873
Score = 27.5 bits (58), Expect = 1.5
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSV--ARVTGTAALISGSVTSIARVP*KTTEA-SLITALISA 379
T++ P+ + VL S + + V T+ I+ S + P ++ A + T + S+
Sbjct: 1804 TALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSS 1863
Query: 378 LV---TTIVTSKTALITLTRITETGVAVT*TGIS 286
V +T +TS TAL T T IT + V + T I+
Sbjct: 1864 SVLNSSTPITSSTALNTSTPITSSSVLNSSTPIT 1897
Score = 27.1 bits (57), Expect = 1.9
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSVAR---VTGTAALISGSVTSIARVP*KTTEASLITALISA 379
T V P+ + VL S + + + + S SV + + +T + T + S+
Sbjct: 1516 TVVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSS 1575
Query: 378 LV---TTIVTSKTALITLTRITETGVAVT*TGIS 286
V +T +TS TAL T T IT + V + T I+
Sbjct: 1576 SVVNSSTPITSSTALNTSTPITSSSVLNSSTPIT 1609
Score = 27.1 bits (57), Expect = 1.9
Identities = 25/88 (28%), Positives = 43/88 (48%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVT 370
T++ P+ + VL S +T ++ L S + + + V +T + T + S+
Sbjct: 3328 TALNTSTPITSSSVL---NSSTAITSSSILNSSTPVTSSSVLNSSTPITSSTVVNSS--- 3381
Query: 369 TIVTSKTALITLTRITETGVAVT*TGIS 286
T +TS TAL T T IT + V + T I+
Sbjct: 3382 TPITSSTALNTSTPITSSSVLNSSTPIT 3409
Score = 26.6 bits (56), Expect = 2.5
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSV--ARVTGTAALISGSVTSIARVP*KTTEASLI---TALI 385
T+V P+ + VL S + + + T+ I+ S + P T +S++ T +
Sbjct: 376 TAVNSSTPITSSSVLNSSTPITSSSILNTSTPITSSSVLNSSTP--ITSSSILNSSTPIT 433
Query: 384 SALV---TTIVTSKTALITLTRITETGVAVT*TGIS 286
S+ V +T +TS TAL T T IT + V + T I+
Sbjct: 434 SSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPIT 469
Score = 26.6 bits (56), Expect = 2.5
Identities = 25/88 (28%), Positives = 43/88 (48%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVT 370
T++ P+ + VL S +T ++ L S + + + V +T + + L S+
Sbjct: 1912 TALNTSTPITSSSVL---NSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSS--- 1965
Query: 369 TIVTSKTALITLTRITETGVAVT*TGIS 286
T +TS TAL T T IT + V + T I+
Sbjct: 1966 TPITSSTALNTSTPITSSSVLNSSTPIT 1993
Score = 26.6 bits (56), Expect = 2.5
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSV--ARVTGTAALISGSVTSIARVP*-KTTEASLITALISA 379
T++ P+ + VL S + + V T+ I+ S + P +T + T + S+
Sbjct: 1972 TALNTSTPITSSSVLNSSTPITSSSVLNTSTPITSSSVLNSSTPITSSTVVNTSTPITSS 2031
Query: 378 LV---TTIVTSKTALITLTRITETGVAVT*TGIS 286
V +T +TS TAL T T IT + V + T I+
Sbjct: 2032 TVVNSSTPITSSTALNTSTPITSSSVLNSSTPIT 2065
Score = 26.6 bits (56), Expect = 2.5
Identities = 25/88 (28%), Positives = 43/88 (48%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVT 370
T++ P+ + VL S +T ++ L S + + + V +T + + L S+
Sbjct: 2104 TALNTSTPITSSSVL---NSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSS--- 2157
Query: 369 TIVTSKTALITLTRITETGVAVT*TGIS 286
T +TS TAL T T IT + V + T I+
Sbjct: 2158 TPITSSTALNTSTPITSSSVLNSSTPIT 2185
Score = 26.6 bits (56), Expect = 2.5
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSV--ARVTGTAALISGSVTSIARVP*-KTTEASLITALISA 379
T + P+ + VL S + + V T+ I+ S + P +T + T + S+
Sbjct: 2236 TVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSS 2295
Query: 378 LV---TTIVTSKTALITLTRITETGVAVT*TGIS 286
V +T +TS TAL T T IT + V + T I+
Sbjct: 2296 TVVNSSTPITSSTALNTSTPITSSSVLNSSTPIT 2329
Score = 26.2 bits (55), Expect = 3.4
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Frame = -3
Query: 564 ASKEITS---VGRGVPVETGPVLVVSRSVARVTG---TAALISGSVTSIARVP*KTTEAS 403
+S ITS + P+ + VL S ++ T + + S SV + + +T +
Sbjct: 992 SSTPITSSSVLNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPITSSTVVN 1051
Query: 402 LITALISALV---TTIVTSKTALITLTRITETGVAVT*TGIS 286
T + S+ V +T +TS TAL T T IT + V + T I+
Sbjct: 1052 TSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPIT 1093
Score = 26.2 bits (55), Expect = 3.4
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSVARVT---GTAALISGSVTSIARVP*KTTEASLITALISA 379
T V P+ + V+ S + T + + S SV + + +T + T + S+
Sbjct: 2800 TVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSS 2859
Query: 378 LV---TTIVTSKTALITLTRITETGVAVT*TGIS 286
V +T +TS TAL T T IT + V + T I+
Sbjct: 2860 SVLNSSTPITSSTALNTSTSITSSSVLNSSTPIT 2893
Score = 25.8 bits (54), Expect = 4.4
Identities = 25/88 (28%), Positives = 41/88 (46%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVT 370
T++ P+ + VL S +T + L S + + + V +T IT+ +
Sbjct: 1072 TALNTSTPITSSSVL---NSSTPITSSTVLNSSTPITSSSVLNSSTP---ITSSTVVNTS 1125
Query: 369 TIVTSKTALITLTRITETGVAVT*TGIS 286
T +TS TAL T T IT + V + T I+
Sbjct: 1126 TPITSSTALNTSTPITSSSVLNSSTPIT 1153
Score = 25.8 bits (54), Expect = 4.4
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSVARVTG---TAALISGSVTSIARVP*KTTEASLITALISA 379
T V P+ + V+ S + T + + S SV + + +T + T + S+
Sbjct: 1732 TVVNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSS 1791
Query: 378 LV---TTIVTSKTALITLTRITETGVAVT*TGIS 286
V +T +TS TAL T T IT + V + T I+
Sbjct: 1792 SVLNSSTPITSSTALNTSTPITSSSVLNSSTPIT 1825
Score = 25.8 bits (54), Expect = 4.4
Identities = 25/88 (28%), Positives = 42/88 (47%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVT 370
T V P+ + V+ S +T + AL + + + + V +T + + L S+
Sbjct: 3016 TVVNTSTPITSSTVV---NSSTPITSSTALNTSTPITSSTVLNSSTPITSSSVLNSS--- 3069
Query: 369 TIVTSKTALITLTRITETGVAVT*TGIS 286
T +TS TAL T T IT + V + T I+
Sbjct: 3070 TPITSSTALNTSTPITSSSVLNSSTAIT 3097
Score = 25.4 bits (53), Expect = 5.9
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Frame = -3
Query: 528 PVETGPVLVVSRSV--ARVTGTAALISGSVTSIARVP*KTTEA-SLITALISALV---TT 367
P+ + VL S + + V T+ I+ S + P ++ A + T + S+ V +T
Sbjct: 467 PITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSST 526
Query: 366 IVTSKTALITLTRITETGVAVT*TGIS 286
+TS TAL T T IT + V + T I+
Sbjct: 527 PITSSTALNTSTSITSSSVLNSSTPIT 553
Score = 25.4 bits (53), Expect = 5.9
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -3
Query: 501 VSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALV---TTIVTSKTALITLT 331
++ S A T T + S SV + + +T + T + S+ V +T +TS TAL T T
Sbjct: 660 ITSSTALNTSTP-ITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTAITSSTALNTST 718
Query: 330 RITETGVAVT*TGIS 286
IT + V + T I+
Sbjct: 719 PITSSSVLNSSTPIT 733
Score = 25.4 bits (53), Expect = 5.9
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Frame = -3
Query: 564 ASKEITS---VGRGVPVETGPVLVVSRSV--ARVTGTAALISGSVTSIARVP*KTTEA-S 403
+S ITS + P+ + VL S + + V T+ I+ S + P ++ A +
Sbjct: 1988 SSTPITSSSVLNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALN 2047
Query: 402 LITALISALV---TTIVTSKTALITLTRITETGVAVT*TGIS 286
T + S+ V +T +TS TAL T T IT + V + T I+
Sbjct: 2048 TSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPIT 2089
Score = 25.4 bits (53), Expect = 5.9
Identities = 24/88 (27%), Positives = 41/88 (46%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVT 370
T++ P+ + VL S + + T S +TS + + ++ IT+ +
Sbjct: 2308 TALNTSTPITSSSVLNSSTPIT--SSTVVNTSTPITSSSVL----NSSTPITSSTVVNTS 2361
Query: 369 TIVTSKTALITLTRITETGVAVT*TGIS 286
T +TS TAL T T IT + V + T I+
Sbjct: 2362 TPITSSTALNTSTSITSSSVLNSSTPIT 2389
Score = 25.0 bits (52), Expect = 7.7
Identities = 24/88 (27%), Positives = 42/88 (47%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVT 370
T++ P+ + VL S +T ++ L S + + + +T + + L S+
Sbjct: 628 TALNTSTPITSSSVL---NSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSS--- 681
Query: 369 TIVTSKTALITLTRITETGVAVT*TGIS 286
T +TS TAL T T IT + V + T I+
Sbjct: 682 TPITSSTALNTSTPITSSSVLNSSTAIT 709
Score = 25.0 bits (52), Expect = 7.7
Identities = 25/88 (28%), Positives = 40/88 (45%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVT 370
T++ P+ + VL S + + T S +TS V ++ IT+ +
Sbjct: 1696 TALNTSTPITSSSVLNSSTPIT--SSTVVNTSTPITSSTVV----NSSTPITSSTVVNSS 1749
Query: 369 TIVTSKTALITLTRITETGVAVT*TGIS 286
T +TS TAL T T IT + V + T I+
Sbjct: 1750 TPITSSTALNTSTPITSSSVLNSSTPIT 1777
Score = 25.0 bits (52), Expect = 7.7
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -3
Query: 528 PVETGPVLVVSRSVAR---VTGTAALISGSVTSIARVP*KTTEASLITALISALV---TT 367
P+ + V+ S S+ + + + S SV + + +T + T + S+ V +T
Sbjct: 2411 PITSSTVVNTSTSITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSST 2470
Query: 366 IVTSKTALITLTRITETGVAVT*TGIS 286
+TS TAL T T IT + V + T I+
Sbjct: 2471 PITSSTALNTSTPITSSSVLNSSTPIT 2497
Score = 25.0 bits (52), Expect = 7.7
Identities = 24/88 (27%), Positives = 41/88 (46%)
Frame = -3
Query: 549 TSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVT 370
T++ P+ + VL S + + T S +TS + + ++ IT+ +
Sbjct: 2716 TALNTSTPITSSSVLNSSTPIT--SSTVVNTSTPITSSSVL----NSSTPITSSTVVNTS 2769
Query: 369 TIVTSKTALITLTRITETGVAVT*TGIS 286
T +TS TAL T T IT + V + T I+
Sbjct: 2770 TPITSSTALNTSTPITSSSVLNSSTPIT 2797
Score = 25.0 bits (52), Expect = 7.7
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = -3
Query: 504 VVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVTTIVTSKTALITLTRI 325
VV+ S + TA S +TS + + ++ IT+ +T +TS TAL T T I
Sbjct: 3377 VVNSSTPITSSTALNTSTPITSSSVL----NSSTPITSSTVVNSSTPITSSTALNTSTPI 3432
Query: 324 TETGVAVT*TGI---SVTETRAAVA 259
T + V + T I SV + A+A
Sbjct: 3433 TSSTVVNSSTPITSSSVLNSSTAIA 3457
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 4.4
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +2
Query: 374 TKADIRAVIREASVVFQGTRAMEVTDPDIRAAVPVTRATDLDTTNTGPVSTGTPRPTL 547
T A +I+ S G+ A + T+P + + VT A NT P + P P++
Sbjct: 326 TDASKTKIIQPPSSYGTGSSAGK-TNPPVNPTIKVTAAIPSPLQNTNPAPSTFPNPSV 382
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.8 bits (54), Expect = 4.4
Identities = 24/82 (29%), Positives = 30/82 (36%)
Frame = -3
Query: 519 TGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVTTIVTSKTALI 340
TG VV ++ VT T I T TE S +T + T T
Sbjct: 821 TGTTTVVIQTPTTVTATETDIVTVTTGYTG-----TETSTVTVTPTGTSTGTTTVVIQTP 875
Query: 339 TLTRITETGVAVT*TGISVTET 274
T TET + TG + TET
Sbjct: 876 TTVTATETDIVTVTTGYTGTET 897
Score = 25.8 bits (54), Expect = 4.4
Identities = 24/82 (29%), Positives = 30/82 (36%)
Frame = -3
Query: 519 TGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVTTIVTSKTALI 340
TG VV ++ VT T I T TE S +T + T T
Sbjct: 865 TGTTTVVIQTPTTVTATETDIVTVTTGYTG-----TETSTVTVTPTGTSTGTTTVVIQTP 919
Query: 339 TLTRITETGVAVT*TGISVTET 274
T TET + TG + TET
Sbjct: 920 TTVTATETDIVTVTTGYTGTET 941
Score = 25.8 bits (54), Expect = 4.4
Identities = 24/82 (29%), Positives = 30/82 (36%)
Frame = -3
Query: 519 TGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVTTIVTSKTALI 340
TG VV ++ VT T I T TE S +T + T T
Sbjct: 909 TGTTTVVIQTPTTVTATETDIVTVTTGYTG-----TETSTVTVTPTGTSTGTTTVVIQTP 963
Query: 339 TLTRITETGVAVT*TGISVTET 274
T TET + TG + TET
Sbjct: 964 TTVTATETDIVTVTTGYTGTET 985
Score = 25.8 bits (54), Expect = 4.4
Identities = 24/82 (29%), Positives = 30/82 (36%)
Frame = -3
Query: 519 TGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVTTIVTSKTALI 340
TG VV ++ VT T I T TE S +T + T T
Sbjct: 953 TGTTTVVIQTPTTVTATETDIVTVTTGYTG-----TETSTVTVTPTGTSTGTTTVVIQTP 1007
Query: 339 TLTRITETGVAVT*TGISVTET 274
T TET + TG + TET
Sbjct: 1008 TTVTATETDIVTVTTGYTGTET 1029
Score = 25.8 bits (54), Expect = 4.4
Identities = 24/82 (29%), Positives = 30/82 (36%)
Frame = -3
Query: 519 TGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVTTIVTSKTALI 340
TG VV ++ VT T I T TE S +T + T T
Sbjct: 997 TGTTTVVIQTPTTVTATETDIVTVTTGYTG-----TETSTVTVTPTGTSTGTTTVVIQTP 1051
Query: 339 TLTRITETGVAVT*TGISVTET 274
T TET + TG + TET
Sbjct: 1052 TTVTATETDIVTVTTGYTGTET 1073
Score = 25.8 bits (54), Expect = 4.4
Identities = 24/82 (29%), Positives = 30/82 (36%)
Frame = -3
Query: 519 TGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLITALISALVTTIVTSKTALI 340
TG VV ++ VT T I T TE S +T + T T
Sbjct: 1041 TGTTTVVIQTPTTVTATETDIVTVTTGYTG-----TETSTVTVTPTGTSTGTTTVVIQTP 1095
Query: 339 TLTRITETGVAVT*TGISVTET 274
T TET + TG + TET
Sbjct: 1096 TTVTATETDIVTVTTGYTGTET 1117
>SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 25.0 bits (52), Expect = 7.7
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = -3
Query: 564 ASKEITSVGRGVPVETGPVLVVSRSVARVTGTAALISGSVTSIARVP*KTTEASLIT-AL 388
+S++ SVG P+ + GT + S+++ E S+ + ++
Sbjct: 41 SSQDTNSVGGEASSTACPLFTTIYTNGITPGTTTIYPTSISTSGVSSNNIDETSVSSESI 100
Query: 387 ISALVTTIVTSKTALITLT 331
I++ +TT +TS + L T T
Sbjct: 101 ITSTITTTITSGSQLYTTT 119
>SPAC607.05 |rpn9||19S proteasome regulatory subunit
Rpn9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 381
Score = 25.0 bits (52), Expect = 7.7
Identities = 9/42 (21%), Positives = 22/42 (52%)
Frame = -3
Query: 450 SVTSIARVP*KTTEASLITALISALVTTIVTSKTALITLTRI 325
++ R+P E ++ AL L+T ++ T ++T++ +
Sbjct: 300 TIARATRIPSNEVELLIMRALSVGLITGVIDEVTQIVTISSV 341
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,526,347
Number of Sequences: 5004
Number of extensions: 23941
Number of successful extensions: 125
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 240047038
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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