Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4823
(649 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 86 4e-17
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 84 1e-16
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 83 2e-16
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 76 4e-14
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 74 1e-13
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 74 1e-13
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 74 1e-13
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 74 1e-13
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 74 1e-13
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 74 1e-13
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 73 3e-13
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 66 4e-11
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 66 4e-11
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 66 5e-11
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 66 5e-11
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 66 5e-11
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 65 7e-11
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 60 2e-09
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 60 2e-09
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 54 2e-07
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 53 4e-07
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 52 7e-07
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 49 6e-06
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 40 0.002
BT024932-1|ABE01162.1| 450|Drosophila melanogaster IP16425p pro... 29 5.4
AF254373-1|AAK53539.1| 2497|Drosophila melanogaster DOMINO B pro... 29 5.4
AF076776-1|AAF82185.1| 3201|Drosophila melanogaster helicase DOM... 29 5.4
AE013599-3190|AAM70872.2| 2497|Drosophila melanogaster CG9696-PE... 29 5.4
AE013599-3189|AAM70871.1| 3198|Drosophila melanogaster CG9696-PA... 29 5.4
AE013599-3188|AAM70870.1| 3183|Drosophila melanogaster CG9696-PD... 29 5.4
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 85.8 bits (203), Expect = 4e-17
Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 2/147 (1%)
Frame = -3
Query: 467 EKVEVLTDALQEQCTTRT*SVDAEHTVLVDREVEHRASLPPLDALPL--ITVKEITGEIA 294
EK EV + L+++ T + ++ + R+VE P +LPL +T++E+ IA
Sbjct: 394 EKTEVFANNLEQRFTPYNYAPES-----LCRQVEEYLESPFQMSLPLSAVTLEEVKNLIA 448
Query: 293 KLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*KEADVIGIHNPGKP 114
KL +KAP D + NR LLP Q + LA I N+ + FP K A +I IH GK
Sbjct: 449 KLPLKKAPGEDLLDNRTIRLLPDQALQFLALIFNSVLDVGYFPKAWKSASIIMIHKTGKT 508
Query: 113 KNEPISYRPIILLPAIGKLYQRLIRKR 33
+ SYRP LLP++GK+ +RLI R
Sbjct: 509 PTDVDSYRPTSLLPSLGKIMERLILNR 535
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 84.2 bits (199), Expect = 1e-16
Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 2/147 (1%)
Frame = -3
Query: 467 EKVEVLTDALQEQCTTRT*SVDAEHTVLVDREVEHRASLPPLDALP--LITVKEITGEIA 294
EK EV + L+++ T + ++ + R+VE P +LP +T++E+ IA
Sbjct: 196 EKTEVFANNLEQRFTPYNYAPES-----LCRQVEEYLESPFQMSLPPSAVTLEEVKNLIA 250
Query: 293 KLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*KEADVIGIHNPGKP 114
KL +KAP D + NR LLP Q + L I N+ + FP K A +I IH GK
Sbjct: 251 KLPLKKAPGEDLLDNRTIRLLPDQALQFLVLIFNSVLDVGYFPKAWKSASIIMIHKTGKT 310
Query: 113 KNEPISYRPIILLPAIGKLYQRLIRKR 33
+ SYRPI LLP++GK+ +RLI R
Sbjct: 311 PTDVDSYRPISLLPSLGKIMERLILNR 337
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 83.4 bits (197), Expect = 2e-16
Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 1/170 (0%)
Frame = -3
Query: 515 LPSHAPQGYLPVFNDDEKVEVLTDALQEQCTTRT*SVDAEHTVLVDR-EVEHRASLPPLD 339
+P P G L N++E+ + L+ + T + ++ +D E + SLP
Sbjct: 378 VPIRCPGGELAK-NEEEQANCFANHLETRFTHFQFATTEQYQETLDSLETPLQMSLP--- 433
Query: 338 ALPLITVKEITGEIAKLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV 159
+ I V+EI I L +K+P D + N LP + I+ LA I NA + FP
Sbjct: 434 -IKPIRVEEIVEAIKSLPLKKSPGIDNVCNATLKALPVRAILYLALIYNAILRVQFFPKQ 492
Query: 158 *KEADVIGIHNPGKPKNEPISYRPIILLPAIGKLYQRLIRKRSGILLSPR 9
K A ++ IH PGKP+ P SYRPI LL ++ KL++RLI R +++ R
Sbjct: 493 WKMAAILMIHKPGKPEESPESYRPISLLSSLSKLWERLIANRLNDIMTER 542
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 76.2 bits (179), Expect = 4e-14
Identities = 41/98 (41%), Positives = 56/98 (57%)
Frame = -3
Query: 326 ITVKEITGEIAKLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*KEA 147
IT+KE+ EI L+ KAP D I N++ LP + + L I N+ + +P K A
Sbjct: 481 ITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHA 540
Query: 146 DVIGIHNPGKPKNEPISYRPIILLPAIGKLYQRLIRKR 33
V I PGK NEP SYRPI LL + K+++RL+ KR
Sbjct: 541 QVKMILKPGKSANEPRSYRPISLLSGLSKIFERLLLKR 578
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 74.1 bits (174), Expect = 1e-13
Identities = 40/98 (40%), Positives = 56/98 (57%)
Frame = -3
Query: 326 ITVKEITGEIAKLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*KEA 147
IT+KE+ EI L+ KAP D I N++ LP + + L I N+ + +P K A
Sbjct: 365 ITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHA 424
Query: 146 DVIGIHNPGKPKNEPISYRPIILLPAIGKLYQRLIRKR 33
V I PGK N+P SYRPI LL + K+++RL+ KR
Sbjct: 425 QVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKR 462
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 74.1 bits (174), Expect = 1e-13
Identities = 40/98 (40%), Positives = 55/98 (56%)
Frame = -3
Query: 326 ITVKEITGEIAKLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*KEA 147
IT+ E+ EI L+ KAP D I N++ LP + + L I N+ + +P K A
Sbjct: 493 ITLNELNEEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHA 552
Query: 146 DVIGIHNPGKPKNEPISYRPIILLPAIGKLYQRLIRKR 33
V I PGK NEP SYRPI LL + K+++RL+ KR
Sbjct: 553 QVKMILKPGKSSNEPKSYRPISLLSGLSKMFERLLLKR 590
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 74.1 bits (174), Expect = 1e-13
Identities = 40/98 (40%), Positives = 56/98 (57%)
Frame = -3
Query: 326 ITVKEITGEIAKLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*KEA 147
IT+KE+ EI L+ KAP D I N++ LP + + L I N+ + +P K A
Sbjct: 481 ITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHA 540
Query: 146 DVIGIHNPGKPKNEPISYRPIILLPAIGKLYQRLIRKR 33
V I PGK N+P SYRPI LL + K+++RL+ KR
Sbjct: 541 QVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKR 578
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 74.1 bits (174), Expect = 1e-13
Identities = 40/98 (40%), Positives = 56/98 (57%)
Frame = -3
Query: 326 ITVKEITGEIAKLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*KEA 147
IT+KE+ EI L+ KAP D I N++ LP + + L I N+ + +P K A
Sbjct: 481 ITLKELNDEIKNLKNSKAPGKDLITNQLIKALPTKATLYLILIYNSILRIGYYPDAWKHA 540
Query: 146 DVIGIHNPGKPKNEPISYRPIILLPAIGKLYQRLIRKR 33
V I PGK N+P SYRPI LL + K+++RL+ KR
Sbjct: 541 QVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKR 578
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 74.1 bits (174), Expect = 1e-13
Identities = 40/98 (40%), Positives = 56/98 (57%)
Frame = -3
Query: 326 ITVKEITGEIAKLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*KEA 147
IT+KE+ EI L+ KAP D I N++ LP + + L I N+ + +P K A
Sbjct: 443 ITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHA 502
Query: 146 DVIGIHNPGKPKNEPISYRPIILLPAIGKLYQRLIRKR 33
V I PGK N+P SYRPI LL + K+++RL+ KR
Sbjct: 503 QVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKR 540
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 74.1 bits (174), Expect = 1e-13
Identities = 40/98 (40%), Positives = 56/98 (57%)
Frame = -3
Query: 326 ITVKEITGEIAKLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*KEA 147
IT+KE+ EI L+ KAP D I N++ LP + + L I N+ + +P K A
Sbjct: 481 ITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHA 540
Query: 146 DVIGIHNPGKPKNEPISYRPIILLPAIGKLYQRLIRKR 33
V I PGK N+P SYRPI LL + K+++RL+ KR
Sbjct: 541 QVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKR 578
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 73.3 bits (172), Expect = 3e-13
Identities = 39/94 (41%), Positives = 51/94 (54%)
Frame = -3
Query: 314 EITGEIAKLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*KEADVIG 135
E+ I + KAP D I N LP Q I+ + + NA + FP K +
Sbjct: 440 EVAEVIVRQSNNKAPGHDVICNATLKALPRQAILYITLVFNAIVRLQYFPYQWKLGIISM 499
Query: 134 IHNPGKPKNEPISYRPIILLPAIGKLYQRLIRKR 33
IH PGKP+ EP SYRPI LLP+I K+++RLI R
Sbjct: 500 IHKPGKPEREPASYRPISLLPSISKVFERLIAVR 533
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 66.1 bits (154), Expect = 4e-11
Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 2/147 (1%)
Frame = -3
Query: 467 EKVEVLTDALQEQCTTRT*SVDAEHTV-LVDREVEHRASLPP-LDALPLITVKEITGEIA 294
EK +L D Q + T S ++T+ V ++ A P + + +T E+ +
Sbjct: 413 EKANILADVFQLKHNL-THSYSNQNTIDQVKISLQSIAETPNNIAEICRVTYPEVFSIVK 471
Query: 293 KLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*KEADVIGIHNPGKP 114
L RK+P DGI N LP I + +I N + FP K A ++ I PGKP
Sbjct: 472 ALHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKP 531
Query: 113 KNEPISYRPIILLPAIGKLYQRLIRKR 33
+ P SYRPI LL + K+ ++LI+ R
Sbjct: 532 PDNPESYRPISLLSGLSKILEKLIKLR 558
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 66.1 bits (154), Expect = 4e-11
Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 2/147 (1%)
Frame = -3
Query: 467 EKVEVLTDALQEQCTTRT*SVDAEHTV-LVDREVEHRASLPP-LDALPLITVKEITGEIA 294
EK +L D Q + T S ++T+ V ++ A P + + +T E+ +
Sbjct: 361 EKANILADVFQLKHNL-THSYSNQNTIDQVKISLQSIAETPNNIAEICRVTYPEVFSIVK 419
Query: 293 KLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*KEADVIGIHNPGKP 114
L RK+P DGI N LP I + +I N + FP K A ++ I PGKP
Sbjct: 420 ALHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKP 479
Query: 113 KNEPISYRPIILLPAIGKLYQRLIRKR 33
+ P SYRPI LL + K+ ++LI+ R
Sbjct: 480 PDNPESYRPISLLSGLSKILEKLIKLR 506
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 65.7 bits (153), Expect = 5e-11
Identities = 49/151 (32%), Positives = 70/151 (46%), Gaps = 5/151 (3%)
Frame = -3
Query: 470 DEKVEVLTDALQEQCTTRT*SVDAEHTVLVDREVEHRASLPPLDA-----LPLITVKEIT 306
DEK E L+ + T + DA+ V E+ SL +T+ E+
Sbjct: 432 DEKAEAFASHLESRFRTNQIN-DAKDREFVRNELNKFKSLNASGESGNSNFKPVTLAELN 490
Query: 305 GEIAKLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*KEADVIGIHN 126
G I L+ +KAP +D ++N+ I LP + I L I N + FP K A + I
Sbjct: 491 GLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPK 550
Query: 125 PGKPKNEPISYRPIILLPAIGKLYQRLIRKR 33
PGK SYRPI LL + KL +R++ KR
Sbjct: 551 PGKSPFALNSYRPISLLSGLSKLLERILPKR 581
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 65.7 bits (153), Expect = 5e-11
Identities = 49/151 (32%), Positives = 70/151 (46%), Gaps = 5/151 (3%)
Frame = -3
Query: 470 DEKVEVLTDALQEQCTTRT*SVDAEHTVLVDREVEHRASLPPLDA-----LPLITVKEIT 306
DEK E L+ + T + DA+ V E+ SL +T+ E+
Sbjct: 432 DEKAEAFASHLESRFRTNQIN-DAKDREFVRNELNKFKSLNASGESGNSNFKPVTLAELN 490
Query: 305 GEIAKLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*KEADVIGIHN 126
G I L+ +KAP +D ++N+ I LP + I L I N + FP K A + I
Sbjct: 491 GLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPK 550
Query: 125 PGKPKNEPISYRPIILLPAIGKLYQRLIRKR 33
PGK SYRPI LL + KL +R++ KR
Sbjct: 551 PGKSPFALNSYRPISLLSGLSKLLERILLKR 581
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 65.7 bits (153), Expect = 5e-11
Identities = 49/151 (32%), Positives = 70/151 (46%), Gaps = 5/151 (3%)
Frame = -3
Query: 470 DEKVEVLTDALQEQCTTRT*SVDAEHTVLVDREVEHRASLPPLDA-----LPLITVKEIT 306
DEK E L+ + T + DA+ V E+ SL +T+ E+
Sbjct: 432 DEKAEAFASHLESRFRTNQIN-DAKDREFVRNELNKFKSLNASGESGNSNFKPVTLAELN 490
Query: 305 GEIAKLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*KEADVIGIHN 126
G I L+ +KAP +D ++N+ I LP + I L I N + FP K A + I
Sbjct: 491 GLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPK 550
Query: 125 PGKPKNEPISYRPIILLPAIGKLYQRLIRKR 33
PGK SYRPI LL + KL +R++ KR
Sbjct: 551 PGKSPFALNSYRPISLLSGLSKLLERILLKR 581
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 65.3 bits (152), Expect = 7e-11
Identities = 37/98 (37%), Positives = 53/98 (54%)
Frame = -3
Query: 326 ITVKEITGEIAKLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*KEA 147
+T+ E+ G I L+ +KAP +D ++N+ I LP + I L I N + FP K A
Sbjct: 37 VTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHA 96
Query: 146 DVIGIHNPGKPKNEPISYRPIILLPAIGKLYQRLIRKR 33
+ I PGK SYRPI LL + KL +R++ KR
Sbjct: 97 SISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKR 134
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 60.5 bits (140), Expect = 2e-09
Identities = 32/87 (36%), Positives = 49/87 (56%)
Frame = -3
Query: 293 KLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*KEADVIGIHNPGKP 114
+L RK+P D I R+ I LP I+ + + NA FP K++ ++ I PGK
Sbjct: 443 QLNPRKSPGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKD 502
Query: 113 KNEPISYRPIILLPAIGKLYQRLIRKR 33
K +P SYRPI LL + KL+++++ R
Sbjct: 503 KTQPSSYRPISLLTCLSKLFEKMLLLR 529
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 60.5 bits (140), Expect = 2e-09
Identities = 32/87 (36%), Positives = 49/87 (56%)
Frame = -3
Query: 293 KLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*KEADVIGIHNPGKP 114
+L RK+P D I R+ I LP I+ + + NA FP K++ ++ I PGK
Sbjct: 443 QLNPRKSPGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKD 502
Query: 113 KNEPISYRPIILLPAIGKLYQRLIRKR 33
K +P SYRPI LL + KL+++++ R
Sbjct: 503 KTQPSSYRPISLLTCLSKLFEKMLLLR 529
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = -3
Query: 332 PLITVKEITGEIAKLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*K 153
P + V E+ +A+L+ R++P DGI+ + + + LAS+ + + FPA K
Sbjct: 432 PALEVFEVDTCVARLKSRRSPGLDGINGTICKAVWRAIPEHLASLFSRCIRLGYFPAEWK 491
Query: 152 EADVIGI-HNPGKPKNEPISYRPIILLPAIGKLYQRLIRKR 33
V+ + P K K EP SYR I LLP GK+ + ++ R
Sbjct: 492 CPRVVSLLKGPDKDKCEPSSYRGICLLPVFGKVLEAIMVNR 532
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 52.8 bits (121), Expect = 4e-07
Identities = 32/97 (32%), Positives = 50/97 (51%)
Frame = -3
Query: 323 TVKEITGEIAKLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*KEAD 144
T+ EI +AK + K+P +D + + L L L I N +T +P + A
Sbjct: 438 TLLEIENSVAKAKG-KSPGADRVSYPMLKNLSPHLKTKLLDIFNQILTTGKYPHTWRSAI 496
Query: 143 VIGIHNPGKPKNEPISYRPIILLPAIGKLYQRLIRKR 33
+I I P KP ++ SYRPI LL +GK +++I +R
Sbjct: 497 IIPISKPNKPPSDINSYRPISLLSCLGKTLEKIIAQR 533
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 52.0 bits (119), Expect = 7e-07
Identities = 29/106 (27%), Positives = 48/106 (45%)
Frame = -3
Query: 350 PPLDALPLITVKEITGEIAKLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCI 171
PP P IT E+ +++ KAP DGI + + + + +
Sbjct: 394 PPASDFPCITSCEVVEAAKRIRPNKAPGIDGIPGVIVKAAATARPEVFRDTFQQCLLDGV 453
Query: 170 FPAV*KEADVIGIHNPGKPKNEPISYRPIILLPAIGKLYQRLIRKR 33
FP K+ ++ + P N P SYRP+ LL +GKL++R++ R
Sbjct: 454 FPKRWKKMKLVLLLKGKGPANVPRSYRPLCLLDIVGKLFERILYAR 499
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 48.8 bits (111), Expect = 6e-06
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = -3
Query: 317 KEITGEIA-KLQERKAPNSDGIHNRVSILLPAQLIIMLASILNAAMTNCIFPAV*KEADV 141
KEIT I L +K+P D I + I LP + + + NA FP K +
Sbjct: 436 KEITKIIKDNLSPKKSPGYDLITPEMIIQLPHSAVRYITKLFNAITKLGYFPQRWKMMKI 495
Query: 140 IGIHNPGKPKNEPISYRPIILLPAIGKLYQRLI 42
I I PGK SYRPI LL I KL+++ +
Sbjct: 496 IMIPKPGKNHTVASSYRPISLLSCISKLFEKCL 528
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/64 (35%), Positives = 35/64 (54%)
Frame = -3
Query: 239 ILLPAQLIIMLASILNAAMTNCIFPAV*KEADVIGIHNPGKPKNEPISYRPIILLPAIGK 60
I LP ++ + + NA FP K++ +I I P K K +P SYRPI LL + K
Sbjct: 3 IELPMCAVMRICLLFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQP-SYRPISLLTCLSK 61
Query: 59 LYQR 48
L+++
Sbjct: 62 LFEK 65
>BT024932-1|ABE01162.1| 450|Drosophila melanogaster IP16425p
protein.
Length = 450
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 235 KIDTRLWIPSELGAFRSCNFAISPVISLTVISGNASKGGREALCSTS 375
K +T+ +PS++G+F A + S T + G A+ G + +TS
Sbjct: 304 KTNTQSQVPSKIGSFTESTPAATESNSSTTVPGTATSGAATSTSATS 350
>AF254373-1|AAK53539.1| 2497|Drosophila melanogaster DOMINO B
protein.
Length = 2497
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 235 KIDTRLWIPSELGAFRSCNFAISPVISLTVISGNASKGGREALCSTS 375
K +T+ +PS++G+F A + S T + G A+ G + +TS
Sbjct: 304 KTNTQSQVPSKIGSFTESTPAATESNSSTTVPGTATSGAATSTSATS 350
>AF076776-1|AAF82185.1| 3201|Drosophila melanogaster helicase DOMINO
A protein.
Length = 3201
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 235 KIDTRLWIPSELGAFRSCNFAISPVISLTVISGNASKGGREALCSTS 375
K +T+ +PS++G+F A + S T + G A+ G + +TS
Sbjct: 304 KTNTQSQVPSKIGSFTESTPAATESNSSTTVPGTATSGAATSTSATS 350
>AE013599-3190|AAM70872.2| 2497|Drosophila melanogaster CG9696-PE,
isoform E protein.
Length = 2497
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 235 KIDTRLWIPSELGAFRSCNFAISPVISLTVISGNASKGGREALCSTS 375
K +T+ +PS++G+F A + S T + G A+ G + +TS
Sbjct: 304 KTNTQSQVPSKIGSFTESTPAATESNSSTTVPGTATSGAATSTSATS 350
>AE013599-3189|AAM70871.1| 3198|Drosophila melanogaster CG9696-PA,
isoform A protein.
Length = 3198
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 235 KIDTRLWIPSELGAFRSCNFAISPVISLTVISGNASKGGREALCSTS 375
K +T+ +PS++G+F A + S T + G A+ G + +TS
Sbjct: 304 KTNTQSQVPSKIGSFTESTPAATESNSSTTVPGTATSGAATSTSATS 350
>AE013599-3188|AAM70870.1| 3183|Drosophila melanogaster CG9696-PD,
isoform D protein.
Length = 3183
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 235 KIDTRLWIPSELGAFRSCNFAISPVISLTVISGNASKGGREALCSTS 375
K +T+ +PS++G+F A + S T + G A+ G + +TS
Sbjct: 304 KTNTQSQVPSKIGSFTESTPAATESNSSTTVPGTATSGAATSTSATS 350
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,583,271
Number of Sequences: 53049
Number of extensions: 648424
Number of successful extensions: 1610
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1609
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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