Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4821
         (310 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010059-1|AAQ22528.1|  712|Drosophila melanogaster LD15480p pro...    26   8.2  
AY071715-1|AAL49337.1|   86|Drosophila melanogaster RH31195p pro...    26   8.2  
AL022018-6|CAA17686.1|  712|Drosophila melanogaster EG:8D8.3 pro...    26   8.2  
AE014298-185|AAF45609.1|  712|Drosophila melanogaster CG12773-PA...    26   8.2  
AE014134-651|AAF51079.1|   79|Drosophila melanogaster CG16704-PA...    26   8.2  

>BT010059-1|AAQ22528.1|  712|Drosophila melanogaster LD15480p
           protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +1

Query: 142 CGFNFYYTSYFFTVKVNRKH--LLSTYFFGKIGTC 240
           C  +F YT Y  +VKV+  H  LL+  +   + +C
Sbjct: 343 CQRSFLYTDYMISVKVSAVHFLLLAGIYVSSMSSC 377


>AY071715-1|AAL49337.1|   86|Drosophila melanogaster RH31195p
           protein.
          Length = 86

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 92  PVWTRNLTTSNCTSYNYAG 148
           P+WT    T+ C ++NY+G
Sbjct: 41  PMWTYRPDTNECFTFNYSG 59


>AL022018-6|CAA17686.1|  712|Drosophila melanogaster EG:8D8.3
           protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +1

Query: 142 CGFNFYYTSYFFTVKVNRKH--LLSTYFFGKIGTC 240
           C  +F YT Y  +VKV+  H  LL+  +   + +C
Sbjct: 343 CQRSFLYTDYMISVKVSAVHFLLLAGIYVSSMSSC 377


>AE014298-185|AAF45609.1|  712|Drosophila melanogaster CG12773-PA
           protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +1

Query: 142 CGFNFYYTSYFFTVKVNRKH--LLSTYFFGKIGTC 240
           C  +F YT Y  +VKV+  H  LL+  +   + +C
Sbjct: 343 CQRSFLYTDYMISVKVSAVHFLLLAGIYVSSMSSC 377


>AE014134-651|AAF51079.1|   79|Drosophila melanogaster CG16704-PA
           protein.
          Length = 79

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 92  PVWTRNLTTSNCTSYNYAG 148
           P+WT    T+ C ++NY+G
Sbjct: 41  PMWTYRPDTNECFTFNYSG 59


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,213,965
Number of Sequences: 53049
Number of extensions: 249177
Number of successful extensions: 461
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 461
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 589756776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)