Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4813
(644 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0438 + 22142646-22143659,22144319-22144858 31 0.78
02_05_0157 - 26353971-26354336,26354645-26354726,26354838-263549... 30 1.4
02_01_0554 + 4083020-4083854,4083877-4083906,4084843-4084911,408... 29 2.4
05_02_0018 + 5626122-5626200,5626683-5626709,5626972-5627042,562... 29 3.2
01_05_0369 - 21468204-21468595,21471417-21471606,21471680-214718... 29 3.2
01_06_1359 - 36645892-36646031,36646625-36646836,36647411-366475... 29 4.2
12_02_0897 + 24105498-24106109 28 5.5
09_03_0199 - 13421210-13421578 28 5.5
08_02_0177 - 13786540-13787055 28 5.5
08_02_0176 - 13777476-13777568,13779610-13780053 28 5.5
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 28 5.5
04_03_0252 - 13517763-13517861,13518845-13519315,13519400-135196... 28 5.5
03_05_0267 - 22538631-22539452 28 5.5
08_02_0310 + 15630589-15631035,15631989-15632134,15632732-156329... 28 7.3
10_08_0338 + 16916429-16916650,16916728-16917900 27 9.7
06_03_0854 + 25400855-25403741,25406174-25407708 27 9.7
06_03_0723 + 23875008-23875204,23875311-23875576,23877166-238772... 27 9.7
06_02_0299 - 13969269-13969366,13969614-13969729,13970753-13970838 27 9.7
>01_05_0438 + 22142646-22143659,22144319-22144858
Length = 517
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1
Query: 491 GGDAVSAISGVGRGDSVRCGDAIGGSDQGRG 399
GGD+V+ + GVG GD GD IG +G G
Sbjct: 377 GGDSVTVVQGVGDGDG--GGDGIGRGRKGSG 405
>02_05_0157 -
26353971-26354336,26354645-26354726,26354838-26354933,
26355365-26356068
Length = 415
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/48 (41%), Positives = 22/48 (45%)
Frame = -1
Query: 533 AVVIGLPSVDAEXVGGDAVSAISGVGRGDSVRCGDAIGGSDQGRGEVG 390
A V+GL V G V A+ GVG G S G A GG G G G
Sbjct: 43 AGVLGLIGETVGAVVGATVGAVDGVGAGASAGGGVAGGGGVAGGGARG 90
>02_01_0554 +
4083020-4083854,4083877-4083906,4084843-4084911,
4085170-4085445,4085601-4085720,4086037-4086044
Length = 445
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -1
Query: 488 GDAVSAISGVGRGDSVRCGDAIGGSDQGRGEVG 390
G+ +A + VG GD V G+ G D RGEVG
Sbjct: 202 GEKSAAAAEVGEGDEVEAGEEDGNGD--RGEVG 232
>05_02_0018 +
5626122-5626200,5626683-5626709,5626972-5627042,
5627123-5627248,5627726-5627755
Length = 110
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 521 GLPSVDAEXVGGDAVSAISGVGRGDSVRCGDAIGGSDQ 408
G S DAE GG A+ G GRG CG++ G ++
Sbjct: 62 GGASHDAESEGGGMRWALVGEGRGSCAACGESGGEGER 99
>01_05_0369 -
21468204-21468595,21471417-21471606,21471680-21471867,
21484028-21484580
Length = 440
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 506 DAEXVGGDAVSAISGVGRGDSVRCGDAIGGSDQGRGEVGSP 384
+ E G+ V AI G G GD+ GDA ++ +G+P
Sbjct: 386 EGEAGAGNGVPAIFGRGGGDAGEEGDAAVSKEETAASIGAP 426
>01_06_1359 -
36645892-36646031,36646625-36646836,36647411-36647594,
36647720-36647795
Length = 203
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 439 LTESPRPTPLMALTASPPTXSASTLGKPITTASPLFSNISYAKIACFFF 585
L P P PL+ ++ + +A+ +G + A F NI++ K + F+
Sbjct: 85 LNRPPPPVPLIKISEDSMSKAAAAVGNILHKALQGFENIAHGKDSSLFY 133
>12_02_0897 + 24105498-24106109
Length = 203
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -1
Query: 494 VGGDAVSAISGVGR-GDSV-RCGDAIGGSDQGRGEVGS 387
VGG A S +G G GD+V G A GG + G GEV +
Sbjct: 61 VGGGAPSTGAGAGGDGDTVVGAGAAAGGGNAGDGEVAA 98
>09_03_0199 - 13421210-13421578
Length = 122
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 485 DAVSAISGVGRGDSVRCGDAIGGSDQGRGEVG 390
D+ S + VGRG ++ IGGS G G G
Sbjct: 86 DSCSKANDVGRGHAIEGKSGIGGSSWGHGRHG 117
>08_02_0177 - 13786540-13787055
Length = 171
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 506 DAEXVGGDAVSAISGVGRGDSVRCGDAIGGSDQGRGEVGSP 384
+ E GD V A G G GD+ GDA ++ +G+P
Sbjct: 76 EGEAGAGDGVPAKFGRGGGDAGEEGDAAVSKEETAASIGAP 116
>08_02_0176 - 13777476-13777568,13779610-13780053
Length = 178
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 506 DAEXVGGDAVSAISGVGRGDSVRCGDAIGGSDQGRGEVGSP 384
+ E GD V A G G GD+ GDA ++ +G+P
Sbjct: 76 EGEAGAGDGVPAKFGRGGGDAGEEGDAAVSKEETAASIGAP 116
>07_03_1512 +
27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 506 DAEXVGGDAVSAISGVGRGDSVRCGDAIGGSDQGRGEVGSP 384
+ E GD V A G G GD+ GDA ++ +G+P
Sbjct: 76 EGEAGAGDGVPAKFGRGGGDAGEEGDAAVSKEETAASIGAP 116
>04_03_0252 -
13517763-13517861,13518845-13519315,13519400-13519679,
13519747-13519829
Length = 310
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 494 VGGDAVSAISGVGRG-DSVRCGDAIGGSDQGRG 399
VGGDA +A++G G G ++ G GG D G
Sbjct: 58 VGGDAAAAVAGSGGGMTTMMMGGGGGGGDDAGG 90
>03_05_0267 - 22538631-22539452
Length = 273
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -1
Query: 491 GGDAVSAISGVGRGDSVRCGDAIGGSDQGRG 399
GG + SG G D CGD GG + G G
Sbjct: 135 GGSSGGEGSGGGSSDGEGCGDGSGGGELGGG 165
>08_02_0310 +
15630589-15631035,15631989-15632134,15632732-15632900,
15633040-15633138,15633817-15633899,15634028-15634157
Length = 357
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 436 HLTESPRPTPLMALTASPPTXSASTLGKPITTAS 537
HL +PRPT + A+P + A G P+ S
Sbjct: 26 HLPRTPRPTTAARIAAAPDSSRARAGGAPLLLGS 59
>10_08_0338 + 16916429-16916650,16916728-16917900
Length = 464
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +3
Query: 441 YGIAAPYTAYGAYGVAPYGLGVHAW*TDHDREP 539
YG A P TAYG YG +G GV A H P
Sbjct: 275 YGHANPGTAYGNYGAGGFG-GVPAGYGGHYGNP 306
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 427 ASPHLTESPRPTPLMALTASPPTXSAS 507
A +E+P P PL+ L A PP+ S
Sbjct: 218 AEAEASEAPAPAPLLLLPAPPPSSDVS 244
>06_03_0723 +
23875008-23875204,23875311-23875576,23877166-23877274,
23877577-23878212,23878328-23878573,23878669-23878834,
23878863-23879076,23879580-23880097,23880617-23880683,
23882131-23882215,23882292-23882367,23882593-23882756,
23883088-23883217,23883314-23883430,23883505-23883600,
23883732-23884009,23886571-23886794,23886935-23887011,
23887103-23887145,23887231-23887288,23888371-23888410,
23888891-23889418
Length = 1444
Score = 27.5 bits (58), Expect = 9.7
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = -1
Query: 545 NNGLAVVIGLPSVDAEXVGGDA----VSAISGVGRGDSVRCGDAIG-GSDQGRGEVGSP 384
NNG A VIG+P D DA ++ G G +VR +A G G RG GSP
Sbjct: 200 NNGYAKVIGVPLNDTHKTPRDANGHGTHTLATAG-GSAVRGAEAFGLGGGTARG--GSP 255
>06_02_0299 - 13969269-13969366,13969614-13969729,13970753-13970838
Length = 99
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 427 ASPHLTESPRPTPLMALTASPPTXSASTL 513
A P+L PRPT LM L P S S+L
Sbjct: 71 AQPNLWLLPRPTALMELFDEPANTSTSSL 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,795,295
Number of Sequences: 37544
Number of extensions: 171782
Number of successful extensions: 1109
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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