Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4811
         (791 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.          33   1.6  
EF212156-1|ABN05232.1|  234|Homo sapiens cellular titin isoform ...    33   1.6  
EF212155-1|ABN05231.1|  391|Homo sapiens cellular titin isoform ...    33   1.6  
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                33   1.6  

>X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.
          Length = 7962

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = +1

Query: 301  KKPEEVQDILVPKIEQKPPSK-PEV 372
            KKPEE   +L+PK E+ PP+K PEV
Sbjct: 6648 KKPEEKVPVLIPKKEKPPPAKVPEV 6672


>EF212156-1|ABN05232.1|  234|Homo sapiens cellular titin isoform
           PEVK variant 4 protein.
          Length = 234

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = +1

Query: 301 KKPEEVQDILVPKIEQKPPSK-PEV 372
           KKPEE   +L+PK E+ PP+K PEV
Sbjct: 24  KKPEEKVPVLIPKKEKPPPAKVPEV 48


>EF212155-1|ABN05231.1|  391|Homo sapiens cellular titin isoform
           PEVK variant 3 protein.
          Length = 391

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = +1

Query: 301 KKPEEVQDILVPKIEQKPPSK-PEV 372
           KKPEE   +L+PK E+ PP+K PEV
Sbjct: 24  KKPEEKVPVLIPKKEKPPPAKVPEV 48


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = +1

Query: 301   KKPEEVQDILVPKIEQKPPSK-PEV 372
             KKPEE   +L+PK E+ PP+K PEV
Sbjct: 10910 KKPEEKVPVLIPKKEKPPPAKVPEV 10934


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,266,460
Number of Sequences: 237096
Number of extensions: 2117006
Number of successful extensions: 14550
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10438
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)