Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4810
(448 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC040136-1|AAH40136.2| 572|Homo sapiens chromosome 1 open readi... 33 0.34
BC010471-1|AAH10471.1| 668|Homo sapiens chromosome 1 open readi... 33 0.34
BC007444-1|AAH07444.1| 668|Homo sapiens chromosome 1 open readi... 33 0.34
BC006493-1|AAH06493.1| 668|Homo sapiens chromosome 1 open readi... 33 0.34
BC006297-1|AAH06297.1| 340|Homo sapiens Similar to chromosome 1... 33 0.34
AL713999-25|CAI95092.1| 572|Homo sapiens chromosome 1 open read... 33 0.34
AL713999-24|CAI95093.1| 650|Homo sapiens chromosome 1 open read... 33 0.34
AL713999-23|CAI95094.1| 668|Homo sapiens chromosome 1 open read... 33 0.34
AL713999-22|CAI95091.1| 433|Homo sapiens chromosome 1 open read... 33 0.34
AF023268-3|AAC51822.1| 669|Homo sapiens cote1 protein. 33 0.34
AC005594-2|AAC33801.1| 508|Homo sapiens R26984_1 protein. 30 4.1
AF217994-1|AAG17236.1| 353|Homo sapiens unknown protein. 29 9.5
>BC040136-1|AAH40136.2| 572|Homo sapiens chromosome 1 open reading
frame 2 protein.
Length = 572
Score = 33.5 bits (73), Expect = 0.34
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 314 PVGATKSSSEAHRYH--PSWLTPCYHSILKKKTRGGARYPIRP 436
P+GA ++ HR P W+ PC+ + ++ RGG R P
Sbjct: 316 PLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAP 358
>BC010471-1|AAH10471.1| 668|Homo sapiens chromosome 1 open reading
frame 2 protein.
Length = 668
Score = 33.5 bits (73), Expect = 0.34
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 314 PVGATKSSSEAHRYH--PSWLTPCYHSILKKKTRGGARYPIRP 436
P+GA ++ HR P W+ PC+ + ++ RGG R P
Sbjct: 412 PLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAP 454
>BC007444-1|AAH07444.1| 668|Homo sapiens chromosome 1 open reading
frame 2 protein.
Length = 668
Score = 33.5 bits (73), Expect = 0.34
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 314 PVGATKSSSEAHRYH--PSWLTPCYHSILKKKTRGGARYPIRP 436
P+GA ++ HR P W+ PC+ + ++ RGG R P
Sbjct: 412 PLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAP 454
>BC006493-1|AAH06493.1| 668|Homo sapiens chromosome 1 open reading
frame 2 protein.
Length = 668
Score = 33.5 bits (73), Expect = 0.34
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 314 PVGATKSSSEAHRYH--PSWLTPCYHSILKKKTRGGARYPIRP 436
P+GA ++ HR P W+ PC+ + ++ RGG R P
Sbjct: 412 PLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAP 454
>BC006297-1|AAH06297.1| 340|Homo sapiens Similar to chromosome 1
open reading frame 2 protein.
Length = 340
Score = 33.5 bits (73), Expect = 0.34
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 314 PVGATKSSSEAHRYH--PSWLTPCYHSILKKKTRGGARYPIRP 436
P+GA ++ HR P W+ PC+ + ++ RGG R P
Sbjct: 84 PLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAP 126
>AL713999-25|CAI95092.1| 572|Homo sapiens chromosome 1 open reading
frame 2 protein.
Length = 572
Score = 33.5 bits (73), Expect = 0.34
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 314 PVGATKSSSEAHRYH--PSWLTPCYHSILKKKTRGGARYPIRP 436
P+GA ++ HR P W+ PC+ + ++ RGG R P
Sbjct: 316 PLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAP 358
>AL713999-24|CAI95093.1| 650|Homo sapiens chromosome 1 open reading
frame 2 protein.
Length = 650
Score = 33.5 bits (73), Expect = 0.34
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 314 PVGATKSSSEAHRYH--PSWLTPCYHSILKKKTRGGARYPIRP 436
P+GA ++ HR P W+ PC+ + ++ RGG R P
Sbjct: 394 PLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAP 436
>AL713999-23|CAI95094.1| 668|Homo sapiens chromosome 1 open reading
frame 2 protein.
Length = 668
Score = 33.5 bits (73), Expect = 0.34
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 314 PVGATKSSSEAHRYH--PSWLTPCYHSILKKKTRGGARYPIRP 436
P+GA ++ HR P W+ PC+ + ++ RGG R P
Sbjct: 412 PLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAP 454
>AL713999-22|CAI95091.1| 433|Homo sapiens chromosome 1 open reading
frame 2 protein.
Length = 433
Score = 33.5 bits (73), Expect = 0.34
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 314 PVGATKSSSEAHRYH--PSWLTPCYHSILKKKTRGGARYPIRP 436
P+GA ++ HR P W+ PC+ + ++ RGG R P
Sbjct: 177 PLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAP 219
>AF023268-3|AAC51822.1| 669|Homo sapiens cote1 protein.
Length = 669
Score = 33.5 bits (73), Expect = 0.34
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 314 PVGATKSSSEAHRYH--PSWLTPCYHSILKKKTRGGARYPIRP 436
P+GA ++ HR P W+ PC+ + ++ RGG R P
Sbjct: 413 PLGAPTAARSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAP 455
>AC005594-2|AAC33801.1| 508|Homo sapiens R26984_1 protein.
Length = 508
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 277 FGSDFLNRPLLRSGRSYQVFFGGPPVSP 360
F ++FL L+R+G+ YQ+ PPVSP
Sbjct: 450 FHTNFLVSQLIRAGKPYQLQVALPPVSP 477
>AF217994-1|AAG17236.1| 353|Homo sapiens unknown protein.
Length = 353
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1
Query: 394 KKKNSRGGPVPNS 432
KKKNSRGGPVP +
Sbjct: 48 KKKNSRGGPVPGN 60
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,127,621
Number of Sequences: 237096
Number of extensions: 1541840
Number of successful extensions: 2508
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2502
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -