Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4810
         (448 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M97693-1|AAA29023.1|  732|Drosophila melanogaster ets DNA bindin...    29   2.8  
BT015272-1|AAT94501.1|  732|Drosophila melanogaster LD19065p pro...    29   2.8  
AE014134-349|AAN10445.1|  732|Drosophila melanogaster CG3166-PB,...    29   2.8  
AE014134-348|AAF51297.1|  732|Drosophila melanogaster CG3166-PA,...    29   2.8  

>M97693-1|AAA29023.1|  732|Drosophila melanogaster ets DNA binding
           domain protein protein.
          Length = 732

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 337 FGGPPVSPFLVDSVLSFYSKKKNSRGGPVPNSP 435
           +G PP SP  + ++   +     +  GP PNSP
Sbjct: 564 YGPPPTSPLFMHAINGAFHYLSAAAAGPPPNSP 596


>BT015272-1|AAT94501.1|  732|Drosophila melanogaster LD19065p
           protein.
          Length = 732

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 337 FGGPPVSPFLVDSVLSFYSKKKNSRGGPVPNSP 435
           +G PP SP  + ++   +     +  GP PNSP
Sbjct: 564 YGPPPTSPLFMHAINGAFHYLSAAAAGPPPNSP 596


>AE014134-349|AAN10445.1|  732|Drosophila melanogaster CG3166-PB,
           isoform B protein.
          Length = 732

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 337 FGGPPVSPFLVDSVLSFYSKKKNSRGGPVPNSP 435
           +G PP SP  + ++   +     +  GP PNSP
Sbjct: 564 YGPPPTSPLFMHAINGAFHYLSAAAAGPPPNSP 596


>AE014134-348|AAF51297.1|  732|Drosophila melanogaster CG3166-PA,
           isoform A protein.
          Length = 732

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 337 FGGPPVSPFLVDSVLSFYSKKKNSRGGPVPNSP 435
           +G PP SP  + ++   +     +  GP PNSP
Sbjct: 564 YGPPPTSPLFMHAINGAFHYLSAAAAGPPPNSP 596


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,312,492
Number of Sequences: 53049
Number of extensions: 451604
Number of successful extensions: 936
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1435027293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)