Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4809
         (793 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83106-2|CAB05494.1|  321|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AC199240-1|ABO33278.1|  427|Caenorhabditis elegans Hypothetical ...    28   6.7  

>Z83106-2|CAB05494.1|  321|Caenorhabditis elegans Hypothetical
           protein F22B8.3 protein.
          Length = 321

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
 Frame = -1

Query: 490 FLVLLINCNIPCY---IISLKLETALKLLSFAI 401
           F ++LI   I  Y   I+ LK+E  LKLLSFAI
Sbjct: 214 FCIMLIQYTIIIYCATIMYLKMEEKLKLLSFAI 246


>AC199240-1|ABO33278.1|  427|Caenorhabditis elegans Hypothetical
           protein 2L52.1 protein.
          Length = 427

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +3

Query: 33  QRRDETLQNSFKSRHVRGLRMF 98
           Q++ E ++N FK+RHVR  ++F
Sbjct: 76  QKKKEWMENHFKTRHVRKAKIF 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,344,319
Number of Sequences: 27780
Number of extensions: 279634
Number of successful extensions: 685
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)