Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4808
(474 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0320 - 2320317-2320336,2320791-2320902,2321092-2321236,232... 144 4e-35
02_02_0016 - 6118739-6118758,6119116-6119236,6119478-6119613,611... 142 1e-34
02_02_0017 - 6131265-6131284,6131654-6131774,6132011-6132146,613... 140 4e-34
11_01_0702 - 5782202-5782277,5782692-5782760,5782878-5783026,578... 38 0.003
11_01_0705 - 5795976-5796051,5796450-5796518,5796632-5796780,579... 34 0.051
08_02_1436 + 27083698-27084111,27084333-27084416,27084502-270845... 30 1.1
01_05_0779 + 25128320-25128518,25129048-25129141,25129867-251300... 29 1.9
12_01_0589 + 4801332-4801573,4801696-4801815,4802540-4802927,480... 28 3.3
09_04_0393 + 17255315-17256019,17256107-17257909 28 3.3
10_08_0134 + 15107411-15107939,15108049-15108124,15108332-151084... 28 4.4
11_04_0328 + 16437947-16438091,16439953-16440062,16440446-164405... 27 5.8
03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584 27 5.8
03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964 27 5.8
01_03_0017 + 11677029-11677100,11677992-11678030,11678169-116783... 27 5.8
10_08_0534 + 18595520-18595828,18595917-18597149 27 7.7
03_05_0783 - 27662178-27662237,27662659-27662700,27662791-276628... 27 7.7
>06_01_0320 -
2320317-2320336,2320791-2320902,2321092-2321236,
2321353-2321459,2321572-2321665,2321752-2321948,
2322311-2322382,2322504-2322618,2323060-2323176,
2323253-2323344,2323445-2323621,2323746-2323820,
2323911-2324051,2324671-2324859,2325298-2325363,
2325445-2325595,2325718-2325786,2326293-2326441,
2326526-2326657,2326756-2327081,2327167-2327203,
2327926-2327980,2328242-2328309,2328464-2328466
Length = 902
Score = 144 bits (348), Expect = 4e-35
Identities = 64/109 (58%), Positives = 85/109 (77%)
Frame = +1
Query: 145 KWAVEEPAISMDVNGGKIICAKHSELQQVNLKALPEGTEIKDGERVPVVAKDMGSCEIYP 324
K E P SMD +G KII AKH+E+Q VN+K + G E+ DGER+P+ K++GSC++YP
Sbjct: 293 KMGREVPVASMDTSG-KIIWAKHNEIQTVNIKTVGAGFEVTDGERLPLAVKELGSCDLYP 351
Query: 325 QTIAHNPNGRFMVVCGDGEFIIYTAMALRNKAFGTAQEFVWAFDSSQYA 471
Q++ HNPNGRF+VVCGDGEFIIYTA+A RN++FG+A EFVW+ +YA
Sbjct: 352 QSLKHNPNGRFVVVCGDGEFIIYTALAWRNRSFGSALEFVWS-SEGEYA 399
Score = 73.7 bits (173), Expect = 7e-14
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = +3
Query: 15 IWHAGTYRLKSSLNYGFERVWTISTMHGSNNVAVGYDEGTIMIKVG 152
IWH+ TYRL+++LNYG ERVW + M GS + +GYDEGTIMIK+G
Sbjct: 250 IWHSTTYRLENTLNYGLERVWAVGYMKGSRRMVIGYDEGTIMIKMG 295
>02_02_0016 -
6118739-6118758,6119116-6119236,6119478-6119613,
6119887-6119993,6120316-6120409,6120509-6120705,
6121872-6121943,6122597-6122773,6122862-6122936,
6123027-6123167,6123837-6124025,6124415-6124480,
6124564-6124714,6125040-6125200,6126279-6126410,
6126508-6126833,6126906-6126942,6127056-6127088,
6127500-6127554,6127666-6127753,6127817-6127862
Length = 807
Score = 142 bits (345), Expect = 1e-34
Identities = 62/105 (59%), Positives = 85/105 (80%)
Frame = +1
Query: 157 EEPAISMDVNGGKIICAKHSELQQVNLKALPEGTEIKDGERVPVVAKDMGSCEIYPQTIA 336
E P SMD + GKII +KH+E+Q VN+K + EI DGER+P+V K++G+C++YPQ++
Sbjct: 310 EVPVASMD-SSGKIIWSKHNEIQTVNIKTIGADNEIADGERLPLVVKELGTCDLYPQSLR 368
Query: 337 HNPNGRFMVVCGDGEFIIYTAMALRNKAFGTAQEFVWAFDSSQYA 471
HNPNGRF+VVCGDGE+IIYTA+A RN++FG+A EFVW+ D +YA
Sbjct: 369 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSLD-GEYA 412
Score = 64.9 bits (151), Expect = 3e-11
Identities = 26/41 (63%), Positives = 33/41 (80%)
Frame = +3
Query: 30 TYRLKSSLNYGFERVWTISTMHGSNNVAVGYDEGTIMIKVG 152
+YRL+++LNYG ERVW + M GS V +GYDEGTIMIK+G
Sbjct: 268 SYRLENTLNYGLERVWALGYMKGSRRVVIGYDEGTIMIKIG 308
>02_02_0017 -
6131265-6131284,6131654-6131774,6132011-6132146,
6132423-6132529,6133006-6133099,6133199-6133395,
6134401-6134472,6135128-6135304,6135393-6135467,
6135557-6135697,6136439-6136627,6136969-6137034,
6137118-6137268,6137596-6137664,6138751-6138899,
6138969-6139100,6139198-6139523,6139599-6139635,
6139765-6139803,6140196-6140250,6140363-6140424,
6140512-6140532,6140820-6140822
Length = 812
Score = 140 bits (340), Expect = 4e-34
Identities = 61/105 (58%), Positives = 84/105 (80%)
Frame = +1
Query: 157 EEPAISMDVNGGKIICAKHSELQQVNLKALPEGTEIKDGERVPVVAKDMGSCEIYPQTIA 336
E P SMD + GKII +KH+E+Q VN+K + EI DGER+P+ K++G+C++YPQ++
Sbjct: 315 EVPVASMD-SSGKIIWSKHNEIQTVNIKTIGADNEIADGERLPLAVKELGTCDLYPQSLR 373
Query: 337 HNPNGRFMVVCGDGEFIIYTAMALRNKAFGTAQEFVWAFDSSQYA 471
HNPNGRF+VVCGDGE+IIYTA+A RN++FG+A EFVW+ D +YA
Sbjct: 374 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSVD-GEYA 417
Score = 74.5 bits (175), Expect = 4e-14
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = +3
Query: 15 IWHAGTYRLKSSLNYGFERVWTISTMHGSNNVAVGYDEGTIMIKVG 152
+WH+ TYRL+++LNYG ERVW + M GS V +GYDEGTIMIK+G
Sbjct: 268 LWHSTTYRLENTLNYGLERVWALGYMKGSRRVVIGYDEGTIMIKIG 313
>11_01_0702 -
5782202-5782277,5782692-5782760,5782878-5783026,
5783119-5783250,5783343-5783671,5784166-5784172
Length = 253
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/45 (31%), Positives = 29/45 (64%)
Frame = +3
Query: 15 IWHAGTYRLKSSLNYGFERVWTISTMHGSNNVAVGYDEGTIMIKV 149
+W+A T++L+ L++ +V I + GS VA+G+D G ++ ++
Sbjct: 199 LWNATTFKLEGVLDFELGKVTAIVCLKGSKRVAIGHDAGLVITEI 243
>11_01_0705 -
5795976-5796051,5796450-5796518,5796632-5796780,
5796875-5797006,5797128-5797450,5798166-5798172,
5799126-5799180,5799685-5799740,5799862-5800029,
5800912-5801097,5801269-5801419,5801515-5801743,
5802277-5802532,5802793-5802894
Length = 652
Score = 34.3 bits (75), Expect = 0.051
Identities = 12/45 (26%), Positives = 28/45 (62%)
Frame = +3
Query: 15 IWHAGTYRLKSSLNYGFERVWTISTMHGSNNVAVGYDEGTIMIKV 149
+W++ T++L+ L++ +V I + GS V +G+D G ++ ++
Sbjct: 598 LWNSITFKLEGVLDFELGQVTAIICLKGSKRVVIGHDAGLVITEI 642
>08_02_1436 +
27083698-27084111,27084333-27084416,27084502-27084551,
27084676-27084724,27085471-27085545,27085724-27085837
Length = 261
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 96 GSNNVAVGYDEGTIMIKVGSRRACYIYG 179
GS V G DEG + +KVG R YI G
Sbjct: 196 GSGQVIKGLDEGILSMKVGGLRRLYIPG 223
>01_05_0779 +
25128320-25128518,25129048-25129141,25129867-25130078,
25130924-25131054,25131933-25132041,25132180-25132659,
25133194-25133531,25133810-25133977
Length = 576
Score = 29.1 bits (62), Expect = 1.9
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Frame = -2
Query: 470 AYCELSNAHTNSWAVPNALFLRAIAVYMMNSPSPHTTMNLPFGLWAIVCGYISQEPMSLA 291
++C+ + +S + AL A+ +++ + +T + G + I Q+
Sbjct: 136 SFCKTTEILEDSQSQEIALDRTAVGSTLLSHQNVCSTSEVSGGNFGIAEVSFLQDEYDAE 195
Query: 290 TTGTRSPSFISVPSGRAFKLT--CCNSECLAQIIFPPFTSIDIAGSSTAH 147
TTG PSF+S S ++ +S L ++F T D+ T H
Sbjct: 196 TTGVLPPSFLSCGSRSMLPISVPSSSSSSLETVLFSDSTYSDLQVKETNH 245
>12_01_0589 +
4801332-4801573,4801696-4801815,4802540-4802927,
4803528-4803865,4804514-4804598
Length = 390
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 343 PNGRFMVVCGDGEFIIYTAMALRNKAFGTAQEFVW 447
PNG+ V+ +GE++ + RN AF T E W
Sbjct: 332 PNGKMQVMVANGEYVSCPGL-YRNTAFTTDTETPW 365
>09_04_0393 + 17255315-17256019,17256107-17257909
Length = 835
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 182 TSIDIAGSSTAHFYHYRTFVIPYSDVVRTVHGGYRP 75
TS D GSS ++ Y YR ++P +D + T RP
Sbjct: 779 TSFDAVGSSNSNPYKYR-MLLPRADTIATTIAESRP 813
>10_08_0134 +
15107411-15107939,15108049-15108124,15108332-15108459,
15108960-15109037,15109734-15110263
Length = 446
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 6 HEGIWHAGTYR-LKSSLNYGFERVWTISTMHGSNNVAVGYDE 128
H GIWH LK L G WT+ + + VGYD+
Sbjct: 250 HLGIWHTKRKSYLKPYLVNGAGSAWTMMSRQFAEYFTVGYDD 291
>11_04_0328 +
16437947-16438091,16439953-16440062,16440446-16440514,
16440840-16440955,16441049-16441103,16441206-16441326,
16441541-16441635,16441728-16441826
Length = 269
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 222 QFRVLSTDNLSSVHVHRYSRLFYCPLLSLSYLRHTLQRRCSNRAWW 85
Q R STD + + + LF+ S S+ R L+++C NRA W
Sbjct: 138 QGRDPSTDFRGAGFISLENLLFFAKTFSASFQR-LLKKQCGNRATW 182
>03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584
Length = 1218
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +3
Query: 15 IWHAGTYRLKSSLNYGFERVWTISTMHGSNNVAVGYDEGTIMIKVGSRRACY 170
IW A + +R W +S N +A G+D G I+ K+ R +
Sbjct: 274 IWDATKRTGIQTFRREHDRFWILSAHPEMNLLAAGHDSGMIVFKLERERPAF 325
>03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964
Length = 1218
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +3
Query: 15 IWHAGTYRLKSSLNYGFERVWTISTMHGSNNVAVGYDEGTIMIKVGSRRACY 170
IW A + +R W +S N +A G+D G I+ K+ R +
Sbjct: 274 IWDATKRTGIQTFRREHDRFWILSAHPEMNLLAAGHDSGMIVFKLERERPAF 325
>01_03_0017 +
11677029-11677100,11677992-11678030,11678169-11678341,
11679068-11679284,11679518-11679688,11679781-11679941,
11680025-11681069,11681320-11681466,11681547-11681774,
11681863-11682020,11682124-11682493
Length = 926
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 247 PEGTEIKDGERVPVVAKDMGSCEIYPQTIAHNPNGRFMVVCGDGEFIIYT 396
P G +KD ER P V + M + Y I + +G + G E I +T
Sbjct: 423 PAGRRVKDHERYPKVVQLMLNNSDYSSNILYEISGGKLGTPGPDEAIAFT 472
>10_08_0534 + 18595520-18595828,18595917-18597149
Length = 513
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 309 GAHVFSNDWYTLSVLYFCAFRESLQVDLLQFRVLSTDN 196
G +FSN WY L+ YF + S DL + + S N
Sbjct: 392 GRTLFSNTWYKLAGGYFKVGQVSKAADLTKKALASASN 429
>03_05_0783 -
27662178-27662237,27662659-27662700,27662791-27662892,
27662991-27663147,27663230-27663307,27663391-27663446,
27663557-27663634,27663736-27663867,27663943-27664078,
27664252-27664403,27665317-27665391,27665476-27665535,
27665865-27665944,27666392-27666462,27666549-27666689,
27667467-27667555,27668657-27668731,27669303-27669401,
27669526-27669572,27669654-27669875,27671485-27671557,
27671650-27671823
Length = 732
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 16 YGTQAPTGSSLP*IMVSKEYGR 81
+GT P G +P IM+ YGR
Sbjct: 413 FGTAVPAGQFVPGIMIGSTYGR 434
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,055,269
Number of Sequences: 37544
Number of extensions: 343794
Number of successful extensions: 990
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 967140324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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