Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4807
(436 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0633 + 16416913-16417009,16417976-16418060,16418398-164185... 58 4e-09
12_02_1200 + 26937624-26937674,26937913-26938005,26938582-269387... 48 4e-06
04_04_1111 - 30979334-30979479,30979769-30979866,30980364-309804... 46 2e-05
08_02_1441 - 27116242-27116354,27116646-27116742,27116841-271170... 45 3e-05
07_03_0151 - 14465479-14465675,14466280-14466401,14466934-144670... 43 9e-05
07_03_0551 + 19374405-19374541,19375201-19375435,19375539-193757... 42 3e-04
02_05_0835 - 32099966-32100111,32100418-32100465,32100673-321007... 39 0.002
09_02_0466 + 9599389-9599662,9600324-9600643,9600950-9601186,960... 28 2.9
07_03_0808 - 21668100-21669092 28 3.8
03_06_0090 + 31570588-31570710,31570962-31571080,31572215-315722... 28 3.8
02_02_0120 + 6984482-6984643,6984748-6984797,6984936-6984996,698... 28 3.8
03_04_0007 + 16265360-16266982 27 5.0
01_06_0049 - 25953811-25954131,25954223-25954903 27 5.0
05_07_0289 + 29004842-29005213,29005318-29005605,29005707-290058... 27 6.6
01_06_1435 + 37351653-37351990,37352241-37352424 27 6.6
12_02_0224 - 15874958-15875311 27 8.7
12_01_1064 - 10978039-10978190,10978731-10978865,10979217-109796... 27 8.7
06_01_0619 - 4501296-4501561,4501664-4501784,4501915-4502253,450... 27 8.7
04_04_0288 + 24164671-24165549,24166113-24166496 27 8.7
02_01_0429 - 3132848-3135043 27 8.7
02_01_0425 - 3102629-3104692,3106505-3108546,3109918-3109989,311... 27 8.7
02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178 27 8.7
01_01_0356 - 2814175-2815401 27 8.7
>05_03_0633 +
16416913-16417009,16417976-16418060,16418398-16418551,
16418808-16419023,16419105-16419241,16419317-16419408,
16419622-16419804,16421722-16421819,16422021-16422070,
16424605-16424756,16424944-16425069,16426315-16426523
Length = 532
Score = 57.6 bits (133), Expect = 4e-09
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Frame = +2
Query: 287 ILKKGD-LAKIDLGAHIDGFIAVVAHTVVVGESEVSGRAANVLLAAHHASE 436
I +KGD + D+G HIDGFIAVVAHT V+ + V+G+AA+VL AA+ A+E
Sbjct: 51 ICEKGDSYIRDDMGCHIDGFIAVVAHTHVIHDGAVTGKAADVLAAANTAAE 101
Score = 46.0 bits (104), Expect = 1e-05
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +2
Query: 5 RKKVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEE 169
R++ E ++ VVTKYK A I+N L+ V++ C P A +ICE GD + ++
Sbjct: 8 REEKELDLSSSDVVTKYKDAADIINNALKLVVSLCKPKAKIVDICEKGDSYIRDD 62
>12_02_1200 +
26937624-26937674,26937913-26938005,26938582-26938728,
26940299-26940379,26940711-26940849,26940977-26941013,
26941095-26941202,26941434-26941533,26941638-26941783,
26941862-26941953,26942086-26942180,26942435-26942531,
26942623-26942766,26942912-26943129,26943213-26943323
Length = 552
Score = 47.6 bits (108), Expect = 4e-06
Identities = 31/102 (30%), Positives = 51/102 (50%)
Frame = +2
Query: 62 AGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVFKKEKDSKKGIAFSTCVSVN 241
A ++ +V + + + P ++CE LE + KE + GIAF T S+N
Sbjct: 246 AAEVHRQVRKHMRSILKPGMLMIDLCE-----TLENMVRKLIKENGLQAGIAFPTGCSLN 300
Query: 242 NCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTV 367
H++P + + +L+ D+ K+D G HIDG+I A TV
Sbjct: 301 WVAAHWTPNSGDKT-VLQYDDVMKLDFGTHIDGYIVDCAFTV 341
>04_04_1111 -
30979334-30979479,30979769-30979866,30980364-30980443,
30980685-30980756,30980860-30980901,30981009-30981170,
30981276-30981427,30981453-30981538,30981654-30981726,
30982706-30982889
Length = 364
Score = 45.6 bits (103), Expect = 2e-05
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Frame = +2
Query: 56 KLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVFKKEKDSKKGIAFSTCVS 235
K A ++ RVLE P + EI + K++++ G S C S
Sbjct: 147 KAACELAARVLEYAGTLVKPSVTTDEIDKAVHKMIIDAGAY---PSPLGYGGFPKSVCTS 203
Query: 236 VNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGE-SEVSGRAANV 409
VN CICH P + E L+ GD+ ID+ +++G+ + T + GE E S R V
Sbjct: 204 VNECICHGIPDSRE----LQDGDIINIDVTVYLNGYHGDTSKTFLCGEVDEASKRLVKV 258
>08_02_1441 -
27116242-27116354,27116646-27116742,27116841-27117058,
27117279-27117422,27117512-27117608,27117932-27118026,
27118140-27118231,27118326-27118471,27118565-27118664,
27118857-27118964,27119040-27119085,27119210-27119345,
27119847-27120044
Length = 529
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/69 (36%), Positives = 37/69 (53%)
Frame = +2
Query: 161 LEETNKVFKKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDG 340
LE + KE + GIAF T S+N H++P + +L+ D+ K+D G HI+G
Sbjct: 218 LENMVRKLIKENGLEAGIAFPTGCSLNCVAAHWTPNGGDKT-VLQYDDVMKLDFGTHING 276
Query: 341 FIAVVAHTV 367
+I A TV
Sbjct: 277 YIVDSAFTV 285
>07_03_0151 -
14465479-14465675,14466280-14466401,14466934-14467081,
14467146-14467167,14467299-14467393,14467395-14467438,
14467750-14467841,14467911-14467982,14468188-14468229,
14468333-14468494,14468631-14468683,14468808-14468925,
14468974-14469150,14469573-14469639,14470195-14470273,
14473805-14473862,14474257-14474346,14474429-14474540,
14474649-14474912,14475361-14475463,14476200-14476278,
14476748-14476852
Length = 766
Score = 43.2 bits (97), Expect = 9e-05
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +2
Query: 209 GIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGESEV 388
G S C SVN CICH P +L+ GD+ ID+ +++G+ + T + GE +
Sbjct: 465 GFPKSVCTSVNECICHGIP----DSRVLQNGDIINIDVTVYLNGYHGDTSRTYLCGEVDE 520
Query: 389 S 391
S
Sbjct: 521 S 521
>07_03_0551 +
19374405-19374541,19375201-19375435,19375539-19375700,
19375778-19375819,19375941-19376012,19376291-19376370,
19376962-19377059,19377691-19377738,19377983-19378083,
19378331-19378426,19378599-19378689,19379510-19379706,
19380918-19381004,19381208-19381488,19381653-19381743
Length = 605
Score = 41.5 bits (93), Expect = 3e-04
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +2
Query: 209 GIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGESEV 388
G S C S+N C+CH P +++ L+ GD+ +D+ ++G+ + T V GE +
Sbjct: 154 GFPKSICTSLNECVCHGVPDSTQ----LQTGDIMNVDVNVFLNGYHGGASRTFVCGEVDD 209
Query: 389 SGR 397
S R
Sbjct: 210 SIR 212
>02_05_0835 -
32099966-32100111,32100418-32100465,32100673-32100770,
32101269-32101348,32101615-32101686,32102260-32102301,
32102382-32102543,32102971-32103199,32103681-32103747,
32103907-32104003
Length = 346
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +2
Query: 209 GIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVG 376
G S C SVN CICH P S P L+ GD+ ID+ +++G+ + T + G
Sbjct: 161 GFPKSVCTSVNECICHGIP-DSRP---LEDGDIINIDVTVYLNGYHGDTSATFLCG 212
>09_02_0466 +
9599389-9599662,9600324-9600643,9600950-9601186,
9601278-9601445,9601778-9601966
Length = 395
Score = 28.3 bits (60), Expect = 2.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 359 HTVVVGESEVSGRAANVLLAAHHAS 433
H V+G S+V G ++LL HHA+
Sbjct: 258 HVTVIGRSKVVGLPTSLLLQRHHAT 282
>07_03_0808 - 21668100-21669092
Length = 330
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 162 NTSLSPNSHISLADASGTHFAMTCSRTRFTICPA 61
+ S P+S S + A+G F TC TR++ P+
Sbjct: 172 SASPRPSSPESFSSATGARFRSTCFSTRYSAIPS 205
>03_06_0090 +
31570588-31570710,31570962-31571080,31572215-31572284,
31572544-31573492,31574789-31575699
Length = 723
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 287 ILKKGDLAKIDLGAHIDGFIAVVAHTVVVGESEVSGR 397
++ +LA DLG +DG +AV A V+ ++E R
Sbjct: 447 VVPDDNLAAGDLGDELDGIVAVTADAEVLDDAERGAR 483
>02_02_0120 +
6984482-6984643,6984748-6984797,6984936-6984996,
6985574-6985669,6985754-6985903,6986208-6986339,
6986641-6986768,6987285-6987327,6987935-6988018,
6989049-6989090,6989264-6989334,6989621-6989674,
6989789-6989894,6990038-6990106,6990824-6990967,
6992038-6992113,6992295-6992353
Length = 508
Score = 27.9 bits (59), Expect = 3.8
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = +2
Query: 224 TCVSV---NNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGESEVSG 394
TC+ N+ + H+ A+ D L GD+A +D+G + + + + + S
Sbjct: 251 TCICATGENSSVLHYGHAAAPNDRTLNDGDMALMDMGGEYHCYGSDITCSYPINGKFNSN 310
Query: 395 RAA--NVLLAAHHA 430
+ N +L AH+A
Sbjct: 311 QTIVYNAVLKAHNA 324
>03_04_0007 + 16265360-16266982
Length = 540
Score = 27.5 bits (58), Expect = 5.0
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 10/49 (20%)
Frame = +2
Query: 299 GDLAKIDLGAHIDGFIA----------VVAHTVVVGESEVSGRAANVLL 415
GD A+ DLGA +DG A + V G +GRA NV+L
Sbjct: 126 GDAARADLGALVDGLAADGNTNIRAGLEIGLAVAAGRRLTAGRAVNVML 174
>01_06_0049 - 25953811-25954131,25954223-25954903
Length = 333
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 210 PFLESFSFLKTLLVSSNTSLSPNSHISLAD 121
PF SF F ++++ SLSP+S SL D
Sbjct: 45 PFSPSFGFSSPSPLATSVSLSPSSSASLVD 74
>05_07_0289 +
29004842-29005213,29005318-29005605,29005707-29005853,
29005939-29006175,29006261-29006524,29006609-29006725,
29006991-29007042,29007903-29008303,29008380-29008598,
29008692-29008925
Length = 776
Score = 27.1 bits (57), Expect = 6.6
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +2
Query: 212 IAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDL---GAHIDGFI-AVVAHTVVVGE 379
+A V+ ++ H + + + L ++L H+ G + AVVA ++ +
Sbjct: 567 LALVAAVNAHDLAAHLAGVDCRVGLVRYDAQLGLVELLVPALHVAGCVLAVVAMAFLLSQ 626
Query: 380 SEVSGRAANVLLAA 421
E AAN LLAA
Sbjct: 627 GERETHAANTLLAA 640
>01_06_1435 + 37351653-37351990,37352241-37352424
Length = 173
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 162 WRRLTRFSKRRKTPRK-ALHFQHAFL 236
WR ++RFS R +TP + A H Q F+
Sbjct: 127 WRNISRFSVRTRTPTQVASHAQKYFI 152
>12_02_0224 - 15874958-15875311
Length = 117
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Frame = -3
Query: 335 QCEHQDLSWLNLLFSECNPVRSQ----WAKSDKCSCSQKRMLKMQCLSWSLSP 189
Q ++LSW +C+ + + WA C C + + W L P
Sbjct: 24 QQREEELSWAKRTVGDCSCISGEEEASWANRTDCGCGRGEEEAQRWREWHLPP 76
>12_01_1064 -
10978039-10978190,10978731-10978865,10979217-10979605,
10979669-10979892,10980011-10980172,10980256-10980906,
10981583-10981804
Length = 644
Score = 26.6 bits (56), Expect = 8.7
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +2
Query: 191 EKDSKKGIAFSTCVS--VNNCICHFSPIASEPDYILKKGDLAKIDL 322
E + K F+ C VN+ C SPI + L GDLAK+ L
Sbjct: 74 EPPATKHSVFTRCSPKFVNDACCALSPIHRQAFAALGLGDLAKMTL 119
>06_01_0619 -
4501296-4501561,4501664-4501784,4501915-4502253,
4502290-4502327,4502673-4502757,4502840-4503093,
4503868-4503961
Length = 398
Score = 26.6 bits (56), Expect = 8.7
Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Frame = +2
Query: 86 LEQVIAKCVPDASAREICEFGDK-------LVLEETNKVFKKEKDSKKGIAFSTCVSVNN 244
L Q ++ + DA+ +I D+ + E+ ++ K SK ++++ S
Sbjct: 109 LVQSVSSGINDAAVGDITIIADRASHVEFTMPYTESGQIIKSPL-SKIVVSYTASFSSIL 167
Query: 245 CICHFSPIASEPDYILKKGDLAKIDLGAHIDGFI 346
+ F P ++ D +LK GD G+ ++ F+
Sbjct: 168 TVKRFQPSVTDLDQLLKNGDYVGYQEGSFVNSFL 201
>04_04_0288 + 24164671-24165549,24166113-24166496
Length = 420
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 329 EHQDLSWLNLLFSECNPVRSQW 264
+H+ LS +NL F C+ V +W
Sbjct: 204 QHEQLSMINLEFCTCDTVELEW 225
>02_01_0429 - 3132848-3135043
Length = 731
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 231 THVENAMPFLESFSFLKTLLVSSN 160
T++ A+ L+SFS LKTLL+ N
Sbjct: 412 TNITKALYILKSFSNLKTLLLGGN 435
>02_01_0425 -
3102629-3104692,3106505-3108546,3109918-3109989,
3110157-3111444
Length = 1821
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 231 THVENAMPFLESFSFLKTLLVSSN 160
T++ A+ L+SFS LKTLL+ N
Sbjct: 835 TNITKALYILKSFSNLKTLLLGGN 858
>02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178
Length = 1143
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 231 THVENAMPFLESFSFLKTLLVSSN 160
T++ NA+ L S S L TLL+S+N
Sbjct: 411 TNITNALQILRSSSKLTTLLISNN 434
>01_01_0356 - 2814175-2815401
Length = 408
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 295 FQNVIRFARNGRKVTNAVVHRNA 227
F +++RF+ GR +AVVHR A
Sbjct: 203 FLDLLRFSLAGRSTPSAVVHRGA 225
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,268,948
Number of Sequences: 37544
Number of extensions: 216591
Number of successful extensions: 652
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 826450812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -