Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4801
         (561 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF036698-1|AAB88352.1|  425|Caenorhabditis elegans Hypothetical ...    89   2e-18
AC024794-6|AAK68493.2|  425|Caenorhabditis elegans Hypothetical ...    87   6e-18
Z35603-2|CAA84674.1|  418|Caenorhabditis elegans Hypothetical pr...    77   7e-15
Z70034-5|CAA93851.2|  197|Caenorhabditis elegans Hypothetical pr...    32   0.25 
Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical pr...    27   7.0  
AL132859-4|CAB60492.1|  365|Caenorhabditis elegans Hypothetical ...    27   7.0  
U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical pr...    27   9.2  
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AF016439-2|AAB65897.1|  176|Caenorhabditis elegans Hypothetical ...    27   9.2  

>AF036698-1|AAB88352.1|  425|Caenorhabditis elegans Hypothetical
           protein B0273.3 protein.
          Length = 425

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 6/160 (3%)
 Frame = +3

Query: 12  FPSGFLFINNTFYVDTREG--CVDNSAVIRTWARRKG-IGDFPVQDMCSVNLEDIVIKLG 182
           +PS   FI++TFY+D+  G   VD S  IRTWA++   IG   V+ M    + D++ +LG
Sbjct: 251 WPSSMFFIHDTFYIDSNTGDQFVDPSITIRTWAKKFDYIGPMHVKQMSETRIGDLICRLG 310

Query: 183 HPEVYVHQGACEHVFTFSEVRCVTVRDPLRRR-HYPCHSAVTHNQTIYCTTCAEFGAKW- 356
            P VY+HQG CEH+  F+++ C  +RD       +P      + + I C TC E  A W 
Sbjct: 311 QPYVYIHQGVCEHLIVFNDL-C--LRDESHTNVEFPRRLVERNFRRIACDTCKEASAHWM 367

Query: 357 IVSGCRRVXXXXXXXXXXXXRQYLYK-DGTKIGEFKAYAY 473
           IV     +            +++ +  +G K+ +FKA  Y
Sbjct: 368 IVDHDNLLPNSPGYLCSSCYKEFCFDVNGNKVCQFKAVPY 407


>AC024794-6|AAK68493.2|  425|Caenorhabditis elegans Hypothetical
           protein Y48G1BM.1 protein.
          Length = 425

 Score = 87.4 bits (207), Expect = 6e-18
 Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 6/160 (3%)
 Frame = +3

Query: 12  FPSGFLFINNTFYVDTREG--CVDNSAVIRTWARRKG-IGDFPVQDMCSVNLEDIVIKLG 182
           +PS   FI++TFY+D+  G   VD S  IR+WA++   IG   V+ M    + D++ +LG
Sbjct: 251 WPSSMFFIHDTFYIDSNTGDKFVDPSITIRSWAKKFDYIGPMHVKQMSETRIGDLICRLG 310

Query: 183 HPEVYVHQGACEHVFTFSEVRCVTVRDPLRRR-HYPCHSAVTHNQTIYCTTCAEFGAKW- 356
            P VY+HQG CEH+  F+++ C  +RD       +P      + + I C TC E  A W 
Sbjct: 311 QPYVYIHQGVCEHLIVFNDL-C--LRDESHTNVEFPRRLVERNFRRIACDTCKEASAHWM 367

Query: 357 IVSGCRRVXXXXXXXXXXXXRQYLYK-DGTKIGEFKAYAY 473
           IV     +            +++ +  +G K+ +FKA  Y
Sbjct: 368 IVDHDNLLPNSPGYLCSSCYKEFCFDVNGKKVCQFKAVPY 407


>Z35603-2|CAA84674.1|  418|Caenorhabditis elegans Hypothetical
           protein T02C12.2 protein.
          Length = 418

 Score = 77.4 bits (182), Expect = 7e-15
 Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 4/174 (2%)
 Frame = +3

Query: 12  FPSGFLFINNTFYVDTREGCVDNSAVIRTWARRKGIGDFPVQ--DMCSVNLEDIVIKLGH 185
           FPS F+F+++TFYVD     +D S  IR +   + I D PV+   M  V + D+ ++LG 
Sbjct: 244 FPSSFIFVHDTFYVDMPPNAIDISHPIRNFMLHREIYD-PVEACSMEGVRIIDLKLRLGQ 302

Query: 186 PEVYVHQGACEHVFTFSEVRCVTVRDPLRRRHYPCHSAVTHNQTIYCTTCAEFGAKWIVS 365
           P ++ H G CEH+  F ++R +   DP     YP       N+   C  C +   +++V 
Sbjct: 303 PYIFQHSGNCEHLLVFHDLRLLHESDPWGIDKYPFTLYEKGNEK-KCDICKKGHVEFVVE 361

Query: 366 GCRRVXXXXXXXXXXXXRQYLYKDGTKIGEFKAYAYIGNELNPLK--PFG*FRQ 521
               +            +++ Y  G K   F A+ Y   +    +  PFG F Q
Sbjct: 362 RHELLPNTYTHFCRTCFQEFNYVHGVKTHSFIAWPYTELQTGEQRGWPFGDFEQ 415


>Z70034-5|CAA93851.2|  197|Caenorhabditis elegans Hypothetical
           protein C18E9.5 protein.
          Length = 197

 Score = 32.3 bits (70), Expect = 0.25
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +3

Query: 18  SGFLFINNTFYVDTREGCVDNSAVIRTWARRKGIGDFPVQDMCSVNLED 164
           S ++F+N+TF+VD R GC   +     + RR G     +Q   S+++E+
Sbjct: 133 SHYVFVNHTFFVD-RNGCTRQAYGYDEYLRRLGFHKIRMQRTESISVEE 180


>Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical
           protein C09G5.6 protein.
          Length = 948

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 104 RPRAYDCAVVHAPFPCVHVKRVVYEQETGWEH 9
           RPR YD      P P   V+   Y++ +G EH
Sbjct: 583 RPRGYDSERAEEPRPRQTVRTNTYDENSGAEH 614


>AL132859-4|CAB60492.1|  365|Caenorhabditis elegans Hypothetical
           protein Y39C12A.8 protein.
          Length = 365

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +3

Query: 183 HPEVYVHQGACEHVFTFSEVRCVTVRDPLRRRHYPCHSAVTHNQTIY 323
           HP+   H  A E     +    + + DP +RR Y   +A T N+ +Y
Sbjct: 55  HPDKCKHPSATEASKVVNNAFSLLM-DPAKRRQYDLQNAETSNENLY 100


>U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical protein
            C23F12.1a protein.
          Length = 2329

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 441  TKIGEFKAYAYIGNELNPLKPF 506
            T++G  K +AY+ +  +PL PF
Sbjct: 965  TEVGTHKVFAYVNDMQHPLSPF 986


>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
            C23F12.1b protein.
          Length = 2747

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 441  TKIGEFKAYAYIGNELNPLKPF 506
            T++G  K +AY+ +  +PL PF
Sbjct: 965  TEVGTHKVFAYVNDMQHPLSPF 986


>AF016439-2|AAB65897.1|  176|Caenorhabditis elegans Hypothetical
           protein R02F11.1 protein.
          Length = 176

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = -1

Query: 165 CPLG*RSTCLGPENLQSPSVAPTCV*LRCCP 73
           CP    S+C      Q  SVA  CV   CCP
Sbjct: 47  CPSNCYSSCSSSSQCQRYSVASVCVQGCCCP 77


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,500,157
Number of Sequences: 27780
Number of extensions: 204710
Number of successful extensions: 530
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)