Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4790
(716 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 101 1e-22
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 81 2e-16
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 70 3e-13
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 61 1e-10
SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|c... 46 4e-06
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 40 3e-04
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 36 0.008
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 35 0.013
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 32 0.094
SPBC15C4.01c |oca3||TPR repeat protein Oca3|Schizosaccharomyces ... 30 0.29
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 30 0.29
SPAC4F10.09c |||ribosome biogenesis protein Noc1 |Schizosaccharo... 30 0.38
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 30 0.38
SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8 ... 30 0.38
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 29 0.66
SPBC13G1.10c |mug81||ATP-dependent RNA helicase Slh1|Schizosacch... 29 0.88
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 29 0.88
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 29 0.88
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 27 2.7
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 27 2.7
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 26 4.7
SPBC13G1.12 |did2||vacuolar sorting protein Did2|Schizosaccharom... 26 6.2
SPBC211.08c |||ribonuclease PH-like|Schizosaccharomyces pombe|ch... 26 6.2
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 26 6.2
SPBC32H8.06 |mug93||TPR repeat protein, meiotically spliced|Schi... 26 6.2
SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr 2|||M... 25 8.2
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 25 8.2
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 101 bits (241), Expect = 1e-22
Identities = 57/150 (38%), Positives = 82/150 (54%), Gaps = 2/150 (1%)
Frame = +2
Query: 272 EQLKKKGNDALVNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKT 451
E+LK KGN A +++ AI +T+AI LD NH+LYSNRS L+DA K
Sbjct: 3 EELKAKGNAAFSKKDYKTAIDYFTQAIGLDERNHILYSNRSACYASEKDYADALKDATKC 62
Query: 452 VSLNPNWSKGYSRKGSVLAYLSRYEEAIEAYKTGLRLEPTNQQLAQGLRDVERAMKESNL 631
L P+W+KG+SRKG+ L L + A AY+ GL+ + N QL GL+ VE A ++
Sbjct: 63 TELKPDWAKGWSRKGAALHGLGDLDAARSAYEEGLKHDANNAQLLNGLKSVEAAQTQAAS 122
Query: 632 EAERLIRLYKNP--RTREWMKDPEYVTKIA 715
A NP + + DP+++ K+A
Sbjct: 123 GAGGF-----NPFAKLGSQLSDPKFMEKLA 147
Score = 64.5 bits (150), Expect = 1e-11
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 10/153 (6%)
Frame = +2
Query: 266 QVEQLKKKGNDALVNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAE 445
+ E+ + KGN+ + +F AIK YTE P++ + NR+ + D
Sbjct: 398 KAEESRVKGNELFKSGDFANAIKEYTEMTKRAPSDPRGFGNRAAAYLKVMAPAECIRDCN 457
Query: 446 KTVSLNPNWSKGYSRKGSVLAYLSRYEEAIEAYKTGLRLEPTNQQLAQGLRDVE------ 607
K + L+PN++K Y RK L L Y + I+A ++ + LR++E
Sbjct: 458 KAIELDPNFAKAYVRKAQALFMLKDYNKCIDACNEASEVDRREPNTGKNLREIESQLSKC 517
Query: 608 ----RAMKESNLEAERLIRLYKNPRTREWMKDP 694
+ +++ E E + R+ K+P ++DP
Sbjct: 518 MSAMASQRQNETEEETMARIQKDPEVLGILQDP 550
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 80.6 bits (190), Expect = 2e-16
Identities = 39/119 (32%), Positives = 67/119 (56%)
Frame = +2
Query: 266 QVEQLKKKGNDALVNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAE 445
+ E+LK +GN+A+ +++ +A+ YT+AI +DPT+ V YSNR+ +EDA
Sbjct: 82 EAEKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDAL 141
Query: 446 KTVSLNPNWSKGYSRKGSVLAYLSRYEEAIEAYKTGLRLEPTNQQLAQGLRDVERAMKE 622
+SL+P+ ++ + R G L A +AYK GL +P N+ L +GL + + +
Sbjct: 142 TCLSLDPHHARAFGRLGRAKLSLGDAAAAADAYKKGLDFDPNNEVLKRGLEAANKQLNQ 200
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 70.1 bits (164), Expect = 3e-13
Identities = 36/115 (31%), Positives = 61/115 (53%)
Frame = +2
Query: 275 QLKKKGNDALVNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTV 454
+LK + N L + +AI YT+AI LD TN +LYSNRS + DA K +
Sbjct: 7 ELKNEANKFLKEGHIVQAIDLYTKAIELDSTNAILYSNRSLAHLKSEDYGLAINDASKAI 66
Query: 455 SLNPNWSKGYSRKGSVLAYLSRYEEAIEAYKTGLRLEPTNQQLAQGLRDVERAMK 619
+P ++K Y R+ + + + +EA+ ++ L L P++ + LR+ E+ +K
Sbjct: 67 ECDPEYAKAYFRRATAHIAIFQPKEAVGDFRKALALAPSDPAARKKLRECEQLVK 121
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 61.3 bits (142), Expect = 1e-10
Identities = 32/124 (25%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Frame = +2
Query: 266 QVEQLKKKGNDALVNQNFDEAIKCYTEAIALDPTNH----VLYSNRSXXXXXXXXXXXXL 433
++E K +GND N+ +A + Y+EA+ +DP N LY NR+ L
Sbjct: 222 KLENTKNQGNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKLYMNRATVLLRLKRPEEAL 281
Query: 434 EDAEKTVSLNPNWSKGYSRKGSVLAYLSRYEEAIEAYKTGLRLEPTNQQLAQGLRDVERA 613
D++ ++++ ++ KG + L ++EEA+ ++ + L+ ++ L Q LR ++
Sbjct: 282 SDSDNALAIDSSYLKGLKVRAKAHEALEKWEEAVRDVQSAIELDASDANLRQELRRLQLE 341
Query: 614 MKES 625
+K+S
Sbjct: 342 LKKS 345
Score = 39.1 bits (87), Expect = 6e-04
Identities = 32/93 (34%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +2
Query: 272 EQLKKKGNDALVNQNFDEAIKCYTEAIAL--DPTNHVLYSNRSXXXXXXXXXXXXLEDAE 445
E+ K GN + + EAIK YTEAI L D + YSNR+ L DA+
Sbjct: 24 EKQKAIGNAFYKEKKYAEAIKAYTEAIDLGSDSALAIYYSNRAATYMQIGEFELALCDAK 83
Query: 446 KTVSLNPNWSKGYSRKGSVLAYLSRYEEAIEAY 544
++ + P+ K SR LS EA E Y
Sbjct: 84 QSDRIKPDVPKTQSRIRQAYEGLSILNEA-EVY 115
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +2
Query: 440 AEKTVSLNPNWSKGYSRKGSVLAYLSRYEEAIEAYKTGLRLEP---TNQQLAQGLRDVER 610
A + LNP + +G V+ Y +AI ++ L+L+P T + L + +R +E
Sbjct: 166 AHDVLRLNPKNVEALVLRGKVMYYSGENAKAITHFQEALKLDPDCTTAKTLFKQVRKLEN 225
Query: 611 AMKESN 628
+ N
Sbjct: 226 TKNQGN 231
>SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 577
Score = 46.4 bits (105), Expect = 4e-06
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Frame = +2
Query: 266 QVEQLKKKGNDALVNQNFDEAIKCYTEAIALDPTNHV-LYSNRSXXXXXXXXXXXXLEDA 442
QV+ +K+K L + F++A+ T+ I +P + L+ R+ DA
Sbjct: 5 QVKAIKEKTQQYLSKRKFEDALTFITKTIEQEPNPTIDLFELRAQVYEKSGQYSQAELDA 64
Query: 443 EKTVSLNPNWSKGYSRKGSVLAYLSRYEEAIEAYKTGLRLEPTNQQLAQGLRDVERAMKE 622
++ + LN ++GY R G +L ++A + Y GLR+ L L+ V + + E
Sbjct: 65 KRMIHLNARNARGYLRLGKLLQLDGFDKKADQLYTQGLRMVHKMDPLRPVLKKVSQRLNE 124
Query: 623 SNLEAERLIRLYK 661
L ++ L++
Sbjct: 125 RILRTRPVLDLFR 137
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 40.3 bits (90), Expect = 3e-04
Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 4/117 (3%)
Frame = +2
Query: 272 EQLKKKGNDALVNQNFDEAIKCYTEAIAL---DPTNHVL-YSNRSXXXXXXXXXXXXLED 439
+ ++ GN+ ++ + +A + YT+A+A D + YSNR+ L D
Sbjct: 65 QNFREHGNECFASKRYKDAEEFYTKALAQKCGDKDIEIACYSNRAACNLLFENYRQVLND 124
Query: 440 AEKTVSLNPNWSKGYSRKGSVLAYLSRYEEAIEAYKTGLRLEPTNQQLAQGLRDVER 610
+ + + +K Y R L L RY+EA E + + P + + +++++
Sbjct: 125 CAQVLQRDSTHAKAYYRSAKALVALKRYDEAKECIRLCSLVHPNDPAILALSKELQK 181
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 35.5 bits (78), Expect = 0.008
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 20/113 (17%)
Frame = +2
Query: 269 VEQLKKKGNDALVNQNFDEAIKCYTEAIALDPTNHV----LYSNRSXXXXXXXXXXXXLE 436
VE+ + GN+ +F +AI+ +T +++ P H L SNRS L+
Sbjct: 412 VEEQQSTGNELFRKGDFSQAIEEFTNSLSQLPAKHTKRVPLLSNRSLCYQKVGDLKTCLQ 471
Query: 437 DAEKTV----------------SLNPNWSKGYSRKGSVLAYLSRYEEAIEAYK 547
D ++ V S+N + K RK VL L +Y+E++ +K
Sbjct: 472 DVDELVDIIGEEKGHGESIRDKSMNDYYVKNMVRKAQVLEQLEKYQESLNIWK 524
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 34.7 bits (76), Expect = 0.013
Identities = 21/104 (20%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Frame = +2
Query: 290 GNDALVNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTVSLNPN 469
G + Q +++A + Y +A+ D N + + L+ + + LNP
Sbjct: 591 GRCYVAQQKYNKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQYQDALDAYSRAIRLNPY 650
Query: 470 WSKGYSRKGSVLAYL-SRYEEAIEAYKTGLRLEPTNQQLAQGLR 598
S+ + G++ ++ +A++AY+ L+PTN + L+
Sbjct: 651 ISEVWYDLGTLYESCHNQISDALDAYQRAAELDPTNPHIKARLQ 694
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 31.9 bits (69), Expect = 0.094
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +2
Query: 305 VNQNFDEAIKCYTEAIALDPT---NHVLYSNRSXXXXXXXXXXXXLEDAEKTVSLNPNWS 475
V+ F EAI Y ++IALD + +H+ ED +K PN S
Sbjct: 427 VSGEFAEAISDYQKSIALDDSFIYSHIQLGVAQYKTHAIAESMKTFEDCKKRF---PNSS 483
Query: 476 KGYSRKGSVLAYLSRYEEAIEAYKTGLRLE 565
+ Y+ G +L ++++A++ + + LE
Sbjct: 484 EVYNYFGEILLDQQKFDDAVKNFDHAIELE 513
Score = 25.8 bits (54), Expect = 6.2
Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 9/135 (6%)
Frame = +2
Query: 290 GNDALVNQNFDEAIKCYTEAIALDPTNHVLYS------NRSXXXXXXXXXXXXLED-AEK 448
G L Q FD+A+K + AI L+ H+ N++ E+ +
Sbjct: 490 GEILLDQQKFDDAVKNFDHAIELEKREHLTIMSAMPLINKALAVFQWKKDISQAENLCRQ 549
Query: 449 TVSLNPNWSKGYSRKGSVLAYLSRYEEAIEAYKTGLRLEPTNQQLAQGLRDVERAMKESN 628
+S +P + L + EA+E ++ +L T ++ E +
Sbjct: 550 ALSADPECDIAIASMAQFLLQQGKAREALEYFEKSAQLARTESEMVNAFSYAEATRTQIA 609
Query: 629 LEAE--RLIRLYKNP 667
L + +L+ NP
Sbjct: 610 LTEKYPQLVGRLSNP 624
>SPBC15C4.01c |oca3||TPR repeat protein Oca3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 282
Score = 30.3 bits (65), Expect = 0.29
Identities = 19/102 (18%), Positives = 42/102 (41%)
Frame = +2
Query: 323 EAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTVSLNPNWSKGYSRKGSV 502
+A+ Y ++ DPT+ V+Y + ++ + N + ++ +
Sbjct: 89 DAMSYYNSKLSEDPTHTVIYKRKLALLRSMGQTKECIQGLINYLDTFYNDLEAWAELADI 148
Query: 503 LAYLSRYEEAIEAYKTGLRLEPTNQQLAQGLRDVERAMKESN 628
+ +E AI Y+ + L+P +L L D+ + +SN
Sbjct: 149 YVSVEAFESAIFCYEEMVLLQPFEPRLFARLGDLYFVLAQSN 190
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 30.3 bits (65), Expect = 0.29
Identities = 19/93 (20%), Positives = 33/93 (35%)
Frame = +2
Query: 305 VNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTVSLNPNWSKGY 484
+ + +A+KC AI LDPT Y+ + K + +N +
Sbjct: 443 LQREHSQALKCINRAIQLDPTFEYAYTLQGHEHSANEEYEKSKTSFRKAIRVNVRHYNAW 502
Query: 485 SRKGSVLAYLSRYEEAIEAYKTGLRLEPTNQQL 583
G V R ++A ++ + P N L
Sbjct: 503 YGLGMVYLKTGRNDQADFHFQRAAEINPNNSVL 535
>SPAC4F10.09c |||ribosome biogenesis protein Noc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 29.9 bits (64), Expect = 0.38
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 4/36 (11%)
Frame = -1
Query: 560 VLNRFYKPLWP----PRTSTNMLKRSLYVNILYSSL 465
+ +R+YK L+ PR +T+ K+SLY+N+LY SL
Sbjct: 427 ISDRYYKSLYESLLDPRLTTSS-KQSLYLNLLYKSL 461
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 29.9 bits (64), Expect = 0.38
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 527 PRTSTNMLKRSLYVNILYSSLGLMIRFSRRLREQPRNSQLWHELL 393
P +LK L + L SSL ++ R+ LR P S L+H+LL
Sbjct: 403 PSQKLGLLKSLLSIGDLSSSLLILGRYPFLLRAYPELSNLYHKLL 447
>SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 565
Score = 29.9 bits (64), Expect = 0.38
Identities = 24/128 (18%), Positives = 52/128 (40%)
Frame = +2
Query: 290 GNDALVNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTVSLNPN 469
G++ + +N AI+ Y A+ ++ ++ + L ++ +L P
Sbjct: 379 GHEYVELKNTHAAIESYRLAVDVNRKDYRAWYGLGQTYEVLDMHFYALYYFQRATALRPY 438
Query: 470 WSKGYSRKGSVLAYLSRYEEAIEAYKTGLRLEPTNQQLAQGLRDVERAMKESNLEAERLI 649
+ + G+ + R +EAI++YK L TN + L ++ +++ N A
Sbjct: 439 DQRMWQALGNCYEKIDRPQEAIKSYKRALLGSQTNSSILVRLGNLYEELQDLNSAASMYK 498
Query: 650 RLYKNPRT 673
+ K T
Sbjct: 499 QCIKTEET 506
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 29.1 bits (62), Expect = 0.66
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 269 VEQLKKKGNDALVNQNFDEAIKCYTEAIALDPTNH 373
+EQL +GN A +N++EA+ Y +A+ + H
Sbjct: 32 IEQLVTQGNMAYAQKNYEEAVDKYGQALMQSESIH 66
>SPBC13G1.10c |mug81||ATP-dependent RNA helicase
Slh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1935
Score = 28.7 bits (61), Expect = 0.88
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 218 HKGIFSSNSYFLTKYSQVEQLKKKGNDALVNQNFDEAIKCYTEAIALDPTNH 373
+KG+F +S F + + KG+ +VN N DEA C+ + + L H
Sbjct: 476 YKGLFYFSSAFRPCPIEQHFIGAKGSPKIVNSNIDEA--CFDKVLKLIQEGH 525
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 28.7 bits (61), Expect = 0.88
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = -1
Query: 557 LNRFYKPLWPPRTSTNMLKRSLYVNILYSSLGLMIRFSR--RLREQPRNSQLWHELLSG- 387
L Y L P TN+ S+Y N+ S+ G + F+ + E+ R L L++
Sbjct: 271 LGERYYDLTPEDEMTNLCANSIYQNLQTSAQGSLEAFNEADTVSEEVRCGPLTERLMASL 330
Query: 386 --CYTKRD 369
CYT+ D
Sbjct: 331 IPCYTQND 338
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 28.7 bits (61), Expect = 0.88
Identities = 16/77 (20%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 311 QNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTVSLNPNWSKGYSR 490
++++ ++KCY A+A+ P N L+ + + ++ + + L+ + + Y
Sbjct: 90 KDYNNSLKCYQNALAISPNNESLWYDAAYLQAQLGLYQPLFDNWNRLLQLDSS-NLEYRL 148
Query: 491 KGSVLAYLS-RYEEAIE 538
++ A+LS Y+E++E
Sbjct: 149 CFTLSAFLSGNYKESLE 165
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +2
Query: 212 LIHKGIFSSNSYFLTKYSQVEQLKKKGNDALVNQNFDEAIKCYTEAIALDPTNHVLYS 385
LI GI + + FL ++ +K + AL ++ +KCY+ + + H LYS
Sbjct: 19 LIAGGIGGATADFLMH--SLDTVKTRQQAALYTNKYNGMVKCYSTILCEEGVFHGLYS 74
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 27.1 bits (57), Expect = 2.7
Identities = 13/74 (17%), Positives = 31/74 (41%)
Frame = +2
Query: 311 QNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEKTVSLNPNWSKGYSR 490
+ ++ + C+ +A+ +P+N +L++ + + VSL P + + S
Sbjct: 452 KEYERSADCFRQALQDEPSNEILWNKLGAALTNAEKNTEAVSSYNRAVSLQPQYVRVRSN 511
Query: 491 KGSVLAYLSRYEEA 532
L +E+A
Sbjct: 512 MAVSNINLGYFEDA 525
Score = 25.4 bits (53), Expect = 8.2
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 473 SKGYSRKGSVLAYLSRYEEAIEAYKTGLRLEPTNQQL 583
SK + G ++ L YE + + ++ L+ EP+N+ L
Sbjct: 438 SKVQAGLGIIMYMLKEYERSADCFRQALQDEPSNEIL 474
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 26.2 bits (55), Expect = 4.7
Identities = 14/68 (20%), Positives = 30/68 (44%)
Frame = +2
Query: 443 EKTVSLNPNWSKGYSRKGSVLAYLSRYEEAIEAYKTGLRLEPTNQQLAQGLRDVERAMKE 622
+ + ++P + +S G A RY A++A+ L+P + + + +E+ M E
Sbjct: 674 QSALRISPKDTNAWSGLGEAYARSGRYVSALKAFNRASILDPDDWYVKYFIATLEKDMGE 733
Query: 623 SNLEAERL 646
+ L
Sbjct: 734 YEVAVSTL 741
>SPBC13G1.12 |did2||vacuolar sorting protein
Did2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 178
Score = 25.8 bits (54), Expect = 6.2
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 497 SVLAYLSRYEEAIEAYKTGLRLEPTNQQLAQGLRDVERAMKESNLE 634
++L SR + +T + + + +A +R ++RAMK NLE
Sbjct: 42 NLLKLSSRIDAVSSRLQTAVTMRAVSGNMAGVVRGMDRAMKTMNLE 87
>SPBC211.08c |||ribonuclease PH-like|Schizosaccharomyces pombe|chr
2|||Manual
Length = 257
Score = 25.8 bits (54), Expect = 6.2
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 497 SVLAYLSRYEEAIEAYKTGLRLEPTNQQLAQGLRDVERAMKESNLEAERLIR---LYKNP 667
S+L +L + +I+ Y + + LA + A+ ++N++ L+ + NP
Sbjct: 119 SILLHLYP-KSSIDVYIQVIESDGALATLAAAISCASSAIADANIDCIDLVTGSSVLFNP 177
Query: 668 RTREWMKDPEYVTKIA 715
T E+ DP+YV + A
Sbjct: 178 NTDEYWIDPDYVDERA 193
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 25.8 bits (54), Expect = 6.2
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 521 YEEAIEAYKTGLRLEPTNQQLAQGL 595
Y +AI++Y ++ +P N AQG+
Sbjct: 650 YIKAIQSYDQAIKFDPKNAHAAQGI 674
>SPBC32H8.06 |mug93||TPR repeat protein, meiotically
spliced|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 25.8 bits (54), Expect = 6.2
Identities = 23/109 (21%), Positives = 40/109 (36%)
Frame = +2
Query: 269 VEQLKKKGNDALVNQNFDEAIKCYTEAIALDPTNHVLYSNRSXXXXXXXXXXXXLEDAEK 448
V ++K AL N + + AI + T +Y++ S + D
Sbjct: 7 VNLVEKSNYVALENTREIDVFDEFLNAIGNENTITPVYADSSLTHLRKKSYTKVVHDCTY 66
Query: 449 TVSLNPNWSKGYSRKGSVLAYLSRYEEAIEAYKTGLRLEPTNQQLAQGL 595
+ +NP K R+G L A ++ L L+P N + + L
Sbjct: 67 ALVINPYDKKVIWRRGLAYLRLGHPHLANRDWEHSLELDPNNTYIQKSL 115
>SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr
2|||Manual
Length = 307
Score = 25.4 bits (53), Expect = 8.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 552 PVL*ASMASSYLDKYAKTLPLREYPL 475
P+L AS SS LD +P R +PL
Sbjct: 217 PILCASSRSSILDTLTPDIPTRIFPL 242
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 25.4 bits (53), Expect = 8.2
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2
Query: 59 EIRSQFQPTIIPLKLIRKYLKRVRAIIE 142
E+ S+++ +++PLKL LK + +IE
Sbjct: 50 ELESKYEVSVLPLKLDVSDLKSIPGVIE 77
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,746,377
Number of Sequences: 5004
Number of extensions: 54443
Number of successful extensions: 174
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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