BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4787
(752 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069144-1|AAL39289.1| 417|Drosophila melanogaster GH16063p pro... 313 1e-85
AE014296-753|AAF47833.2| 417|Drosophila melanogaster CG14993-PA... 313 1e-85
AY119658-1|AAM50312.1| 1006|Drosophila melanogaster SD04414p pro... 32 0.97
AF211192-1|AAF32278.1| 983|Drosophila melanogaster SULF1 protein. 32 0.97
AE014297-2184|AAF55296.1| 1114|Drosophila melanogaster CG6725-PA... 32 0.97
AY060771-1|AAL28319.1| 293|Drosophila melanogaster GH23390p pro... 31 2.2
AE014297-3082|AAF55945.2| 293|Drosophila melanogaster CG6028-PA... 31 2.2
L08811-1|AAA79329.2| 3503|Drosophila melanogaster adherin protein. 30 3.9
BT024409-1|ABC86471.1| 821|Drosophila melanogaster IP03940p pro... 30 3.9
AE014134-139|AAF51468.3| 3556|Drosophila melanogaster CG17941-PA... 30 3.9
X78908-1|CAA55519.1| 86|Drosophila melanogaster shaker protein... 29 5.2
AY061329-1|AAL28877.1| 504|Drosophila melanogaster LD25651p pro... 29 5.2
AE014298-688|AAF45991.2| 400|Drosophila melanogaster CG32770-PA... 29 6.8
AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA... 29 6.8
AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi... 29 9.0
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA... 29 9.0
>AY069144-1|AAL39289.1| 417|Drosophila melanogaster GH16063p
protein.
Length = 417
Score = 313 bits (769), Expect = 1e-85
Identities = 140/238 (58%), Positives = 172/238 (72%)
Frame = +3
Query: 9 RPYGQTLPVEGAAPHFGPCKLMDFELEVGAFVGGPPTQLGERVCAKDAEDKIFGFVLLND 188
RP GQT P P FG CKL+DFELE+ F+GG QLGE + +A +FGF L+ND
Sbjct: 172 RPLGQTFPDGAEKPVFGACKLLDFELEMAFFIGGKGNQLGEPIRVDEAWKNVFGFTLMND 231
Query: 189 WSARDIQKWEYIPLGPFTAKNLGSTISPWIVTLEALRPFIVDNFPQNPTPFPYLRHDDKF 368
WSARDIQKWEY+PLGPFTAKNLG+TISPW+V AL+PF++DNFPQ P PYLR + F
Sbjct: 232 WSARDIQKWEYVPLGPFTAKNLGTTISPWVVPTAALKPFVLDNFPQEPEVLPYLRQNIPF 291
Query: 369 NFDIKLEVDIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISG 548
NFDI LEV ++ + +SN++++YWT QQ+A T+TGCNLRPGDL+ SGTISG
Sbjct: 292 NFDINLEVSLKPADQN-EALISKSNFKHLYWTPLQQIAHHTVTGCNLRPGDLMASGTISG 350
Query: 549 EAADSFGSMLELSWKGTKPVRLSTGEERKFIQDGDTVTLRGHCLNATGLKIGFGRCEG 722
E DS+GS+LEL WKGTK + L G+ RKF+QD D V +RGHC GL+IGFG C G
Sbjct: 351 ETPDSYGSLLELCWKGTKTLELPGGKTRKFLQDFDEVIIRGHC-EKNGLRIGFGECVG 407
>AE014296-753|AAF47833.2| 417|Drosophila melanogaster CG14993-PA
protein.
Length = 417
Score = 313 bits (769), Expect = 1e-85
Identities = 140/238 (58%), Positives = 172/238 (72%)
Frame = +3
Query: 9 RPYGQTLPVEGAAPHFGPCKLMDFELEVGAFVGGPPTQLGERVCAKDAEDKIFGFVLLND 188
RP GQT P P FG CKL+DFELE+ F+GG QLGE + +A +FGF L+ND
Sbjct: 172 RPLGQTFPDGAEKPVFGACKLLDFELEMAFFIGGKGNQLGEPIRVDEAWKNVFGFTLMND 231
Query: 189 WSARDIQKWEYIPLGPFTAKNLGSTISPWIVTLEALRPFIVDNFPQNPTPFPYLRHDDKF 368
WSARDIQKWEY+PLGPFTAKNLG+TISPW+V AL+PF++DNFPQ P PYLR + F
Sbjct: 232 WSARDIQKWEYVPLGPFTAKNLGTTISPWVVPTAALKPFVLDNFPQEPEVLPYLRQNIPF 291
Query: 369 NFDIKLEVDIQTEKSPVVTTVCRSNYRYMYWTVKQQLAQQTITGCNLRPGDLLGSGTISG 548
NFDI LEV ++ + +SN++++YWT QQ+A T+TGCNLRPGDL+ SGTISG
Sbjct: 292 NFDINLEVSLKPADQN-EALISKSNFKHLYWTPLQQIAHHTVTGCNLRPGDLMASGTISG 350
Query: 549 EAADSFGSMLELSWKGTKPVRLSTGEERKFIQDGDTVTLRGHCLNATGLKIGFGRCEG 722
E DS+GS+LEL WKGTK + L G+ RKF+QD D V +RGHC GL+IGFG C G
Sbjct: 351 ETPDSYGSLLELCWKGTKTLELPGGKTRKFLQDFDEVIIRGHC-EKNGLRIGFGECVG 407
>AY119658-1|AAM50312.1| 1006|Drosophila melanogaster SD04414p
protein.
Length = 1006
Score = 31.9 bits (69), Expect = 0.97
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = -1
Query: 446 IV*TANSGHHRGLFSL----NVHFQFDVEIEFIVVSQVGERSRVLREVV 312
IV T++ G+H G F L + F+FDV + F++ + S+V+ E+V
Sbjct: 214 IVYTSDHGYHLGQFGLIKGKSFPFEFDVRVPFLIRGPGIQASKVVNEIV 262
>AF211192-1|AAF32278.1| 983|Drosophila melanogaster SULF1 protein.
Length = 983
Score = 31.9 bits (69), Expect = 0.97
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = -1
Query: 446 IV*TANSGHHRGLFSL----NVHFQFDVEIEFIVVSQVGERSRVLREVV 312
IV T++ G+H G F L + F+FDV + F++ + S+V+ E+V
Sbjct: 218 IVYTSDHGYHLGQFGLIKGKSFPFEFDVRVPFLIRGPGIQASKVVNEIV 266
>AE014297-2184|AAF55296.1| 1114|Drosophila melanogaster CG6725-PA
protein.
Length = 1114
Score = 31.9 bits (69), Expect = 0.97
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = -1
Query: 446 IV*TANSGHHRGLFSL----NVHFQFDVEIEFIVVSQVGERSRVLREVV 312
IV T++ G+H G F L + F+FDV + F++ + S+V+ E+V
Sbjct: 322 IVYTSDHGYHLGQFGLIKGKSFPFEFDVRVPFLIRGPGIQASKVVNEIV 370
>AY060771-1|AAL28319.1| 293|Drosophila melanogaster GH23390p
protein.
Length = 293
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 30 PVEGAAPHFGPCKLMDFELEVGAFVGGPPTQLGERVCAKDAEDKIFGFVLLNDWSARDIQ 209
P + H K+ D+E+E+ +G ++ +V A D +FG+ + D SARD Q
Sbjct: 120 PQDNVIAHAASSKI-DWEVELVCVIG----KVARQVPKSQAMDYVFGYSVAQDISARDWQ 174
Query: 210 K 212
K
Sbjct: 175 K 175
>AE014297-3082|AAF55945.2| 293|Drosophila melanogaster CG6028-PA,
isoform A protein.
Length = 293
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 30 PVEGAAPHFGPCKLMDFELEVGAFVGGPPTQLGERVCAKDAEDKIFGFVLLNDWSARDIQ 209
P + H K+ D+E+E+ +G ++ +V A D +FG+ + D SARD Q
Sbjct: 120 PQDNVIAHAASSKI-DWEVELVCVIG----KVARQVPKSQAMDYVFGYSVAQDISARDWQ 174
Query: 210 K 212
K
Sbjct: 175 K 175
>L08811-1|AAA79329.2| 3503|Drosophila melanogaster adherin protein.
Length = 3503
Score = 29.9 bits (64), Expect = 3.9
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = -2
Query: 721 PSHLPNPILSPVALR--QWPRRVT--VSPSCMNFLSSPVERRTGLVPFQDSSNMLPNES- 557
P+H+P P+L+ VA R P R+ +S + + SP+ F SS M P+ S
Sbjct: 3398 PTHIPPPLLTNVAPRAINLPMRLPPHLSLAPAHLPRSPIGHEAS-GSFSTSSAMSPSFSP 3456
Query: 556 AASPLMVPEPSKSP 515
+ SPL PS SP
Sbjct: 3457 SLSPLATRSPSISP 3470
>BT024409-1|ABC86471.1| 821|Drosophila melanogaster IP03940p
protein.
Length = 821
Score = 29.9 bits (64), Expect = 3.9
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = -2
Query: 721 PSHLPNPILSPVALR--QWPRRVT--VSPSCMNFLSSPVERRTGLVPFQDSSNMLPNES- 557
P+H+P P+L+ VA R P R+ +S + + SP+ F SS M P+ S
Sbjct: 716 PTHIPPPLLTNVAPRAINLPMRLPPHLSLAPAHLPRSPIGHEAS-GSFSTSSAMSPSFSP 774
Query: 556 AASPLMVPEPSKSP 515
+ SPL PS SP
Sbjct: 775 SLSPLATRSPSISP 788
>AE014134-139|AAF51468.3| 3556|Drosophila melanogaster CG17941-PA
protein.
Length = 3556
Score = 29.9 bits (64), Expect = 3.9
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = -2
Query: 721 PSHLPNPILSPVALR--QWPRRVT--VSPSCMNFLSSPVERRTGLVPFQDSSNMLPNES- 557
P+H+P P+L+ VA R P R+ +S + + SP+ F SS M P+ S
Sbjct: 3451 PTHIPPPLLTNVAPRAINLPMRLPPHLSLAPAHLPRSPIGHEAS-GSFSTSSAMSPSFSP 3509
Query: 556 AASPLMVPEPSKSP 515
+ SPL PS SP
Sbjct: 3510 SLSPLATRSPSISP 3523
>X78908-1|CAA55519.1| 86|Drosophila melanogaster shaker protein
protein.
Length = 86
Score = 29.5 bits (63), Expect = 5.2
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +3
Query: 414 PVVTTVCRSNYRYMYWTVKQQLAQQT---ITGCNLRPGDLLGSGTISGEAADSFGSMLEL 584
PV V NY Y T ++++ Q +T C PG L+G ++S M++L
Sbjct: 24 PVPVIVSNFNYFYHRETDQEEMQSQNFNHVTSCPYLPGTLVGQHMKKSSLSESSSDMMDL 83
>AY061329-1|AAL28877.1| 504|Drosophila melanogaster LD25651p
protein.
Length = 504
Score = 29.5 bits (63), Expect = 5.2
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +2
Query: 38 RCGAPLRSLQTDGLRTGGGRVCRRAPH-TTGREGLRQRCRR 157
RC + T RT G R H REGLRQ CRR
Sbjct: 437 RCRRAVAHTHTPSERTASGGQARWTQHGAVVREGLRQGCRR 477
>AE014298-688|AAF45991.2| 400|Drosophila melanogaster CG32770-PA
protein.
Length = 400
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 516 GDLLGSGTISGEAADSFGSMLELSWKGTKPVRL 614
G L+G G++SG A + GSM++++ + P L
Sbjct: 261 GGLIGGGSVSGGAGGAGGSMMDVAHEEDTPTSL 293
>AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA
protein.
Length = 950
Score = 29.1 bits (62), Expect = 6.8
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = -2
Query: 154 SASLAQTLSPSCVGGPPTNAPTSS----SKSISLQGPKWGAAPSTGKVCP 17
S+S + S S GGP +AP+SS S S+S GP + +APS+ P
Sbjct: 747 SSSYSAPSSSSSSGGPYPSAPSSSYSAPSSSLSSGGP-YPSAPSSSYAAP 795
>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
ubiquitin-conjugatingenzyme protein.
Length = 4876
Score = 28.7 bits (61), Expect = 9.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 121 CVGGPPTNAPTSSSKSISLQGPKWGAAPST 32
CVGGP +++ +S + S PK A P T
Sbjct: 2264 CVGGPSSSSGNTSKSAASSSSPKNQAVPGT 2293
>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
protein.
Length = 4876
Score = 28.7 bits (61), Expect = 9.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 121 CVGGPPTNAPTSSSKSISLQGPKWGAAPST 32
CVGGP +++ +S + S PK A P T
Sbjct: 2264 CVGGPSSSSGNTSKSAASSSSPKNQAVPGT 2293
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,738,415
Number of Sequences: 53049
Number of extensions: 1037628
Number of successful extensions: 4043
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4037
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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