Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4784
         (573 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY358185-1|AAQ88552.1|  613|Homo sapiens olfactomedin-like protein.    31   2.9  
AL354928-4|CAI39635.2|  652|Homo sapiens olfactomedin-like 2A pr...    31   2.9  
AB119055-1|BAD38864.1|  652|Homo sapiens photomedin-1 protein.         31   2.9  

>AY358185-1|AAQ88552.1|  613|Homo sapiens olfactomedin-like protein.
          Length = 613

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = -3

Query: 526 PTLCNLQ*VLNLVSGRLMAVTL*RVSEYEHQPGRKLHYLSTVVKAN 389
           P L  LQ +++L+ G L ++ L +V  Y H+   +++ L   +KAN
Sbjct: 75  PELLKLQSMVDLLEGTLYSMDLMKVHAYVHKVASQMNTLEESIKAN 120


>AL354928-4|CAI39635.2|  652|Homo sapiens olfactomedin-like 2A
           protein.
          Length = 652

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = -3

Query: 526 PTLCNLQ*VLNLVSGRLMAVTL*RVSEYEHQPGRKLHYLSTVVKAN 389
           P L  LQ +++L+ G L ++ L +V  Y H+   +++ L   +KAN
Sbjct: 114 PELLKLQSMVDLLEGTLYSMDLMKVHAYVHKVASQMNTLEESIKAN 159


>AB119055-1|BAD38864.1|  652|Homo sapiens photomedin-1 protein.
          Length = 652

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = -3

Query: 526 PTLCNLQ*VLNLVSGRLMAVTL*RVSEYEHQPGRKLHYLSTVVKAN 389
           P L  LQ +++L+ G L ++ L +V  Y H+   +++ L   +KAN
Sbjct: 114 PELLKLQSMVDLLEGTLYSMDLMKVHAYVHKVASQMNTLEESIKAN 159


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,847,447
Number of Sequences: 237096
Number of extensions: 1715709
Number of successful extensions: 3325
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3325
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)