Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4784
         (573 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004847-1|AAO45203.1|  955|Drosophila melanogaster RE70412p pro...    29   5.9  
AE014298-2109|AAF48429.2|  955|Drosophila melanogaster CG9095-PA...    29   5.9  
BT023115-1|AAY55531.1|  406|Drosophila melanogaster IP10861p pro...    28   7.8  
BT023063-1|AAY55479.1|  407|Drosophila melanogaster IP10961p pro...    28   7.8  
AE013599-627|AAF59107.2|  399|Drosophila melanogaster CG30371-PA...    28   7.8  

>BT004847-1|AAO45203.1|  955|Drosophila melanogaster RE70412p
           protein.
          Length = 955

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +3

Query: 123 VYSTTVTPPLKLKRITALTTAASPFKPKLITAS 221
           V S+  TPP    ++ + TT+ +P++P + TAS
Sbjct: 572 VPSSVATPPPFRPKVVSSTTSRTPYRPAVSTAS 604


>AE014298-2109|AAF48429.2|  955|Drosophila melanogaster CG9095-PA
           protein.
          Length = 955

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +3

Query: 123 VYSTTVTPPLKLKRITALTTAASPFKPKLITAS 221
           V S+  TPP    ++ + TT+ +P++P + TAS
Sbjct: 572 VPSSVATPPPFRPKVVSSTTSRTPYRPAVSTAS 604


>BT023115-1|AAY55531.1|  406|Drosophila melanogaster IP10861p
           protein.
          Length = 406

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = +3

Query: 336 VLSHKPQTSY*LFALTVLFAFTTVDK*WSLRPGWCSYSETRY 461
           +L H P  S  LFA TVL  F   D  ++L PG  +Y E+ Y
Sbjct: 8   MLRHLPLISLLLFAPTVLAYFEGCDNTFNLSPG-TTYVESPY 48


>BT023063-1|AAY55479.1|  407|Drosophila melanogaster IP10961p
           protein.
          Length = 407

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = +3

Query: 336 VLSHKPQTSY*LFALTVLFAFTTVDK*WSLRPGWCSYSETRY 461
           +L H P  S  LFA TVL  F   D  ++L PG  +Y E+ Y
Sbjct: 9   MLRHLPLISLLLFAPTVLAYFEGCDNTFNLSPG-TTYVESPY 49


>AE013599-627|AAF59107.2|  399|Drosophila melanogaster CG30371-PA
           protein.
          Length = 399

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = +3

Query: 336 VLSHKPQTSY*LFALTVLFAFTTVDK*WSLRPGWCSYSETRY 461
           +L H P  S  LFA TVL  F   D  ++L PG  +Y E+ Y
Sbjct: 1   MLRHLPLISLLLFAPTVLAYFEGCDNTFNLSPG-TTYVESPY 41


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,020,881
Number of Sequences: 53049
Number of extensions: 506484
Number of successful extensions: 972
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)