Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4782
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73911-3|CAC42339.1|  324|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical pr...    27   9.8  
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>Z73911-3|CAC42339.1|  324|Caenorhabditis elegans Hypothetical
           protein T12A7.7 protein.
          Length = 324

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = +1

Query: 16  FRTNRVVRFRNLGLFITLNVNNAMNVNFIVINTPSHFVEK 135
           FRTN V+ F  LGLFI      A     IV+N P     K
Sbjct: 259 FRTNNVI-FLTLGLFIWALHGAACTAGIIVVNKPFRLATK 297


>Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical protein
            F22E10.1 protein.
          Length = 1318

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = -1

Query: 458  FRMLSENLWEFGMDFLTKISSYFFQFVHTCVALVRFKVG*RVYKPPSL--HIHIRRKARL 285
            +++  ENL +   D   KI+    + V T   L   +     YK   L  H    RK+ +
Sbjct: 922  YKIARENLKQIRKDEAGKIAIEIIESVKTIQLLTSTQRFLTHYKDAQLVQHKSEMRKSYI 981

Query: 284  KN*NNSIDTTFMF 246
            ++ NN+I  TFM+
Sbjct: 982  QSVNNAISQTFMY 994


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical
           protein B0207.5 protein.
          Length = 3279

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 609 FELTCIFTKCCITYIKPRQLAK 674
           +E  CI+TK   +YIKP +L+K
Sbjct: 368 YERKCIWTKLDCSYIKPDELSK 389


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,896,205
Number of Sequences: 27780
Number of extensions: 326387
Number of successful extensions: 723
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)