Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4779
         (722 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   3.9  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   3.9  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   3.9  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   3.9  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   5.1  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   6.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   8.9  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 244 LLRAHVVLRCIGILSSVKMDSLALCS 167
           L+R H++L C G L+    D   LCS
Sbjct: 177 LMRRHLILSCQGRLNIFPFDD-PLCS 201


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 244 LLRAHVVLRCIGILSSVKMDSLALCS 167
           L+R H++L C G L+    D   LCS
Sbjct: 177 LMRRHLILSCQGRLNIFPFDD-PLCS 201


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 244 LLRAHVVLRCIGILSSVKMDSLALCS 167
           L+R H++L C G L+    D   LCS
Sbjct: 228 LMRRHLILSCQGRLNIFPFDD-PLCS 252


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 244 LLRAHVVLRCIGILSSVKMDSLALCS 167
           L+R H++L C G L+    D   LCS
Sbjct: 177 LMRRHLILSCQGRLNIFPFDD-PLCS 201


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 14/65 (21%), Positives = 30/65 (46%)
 Frame = -2

Query: 400 ATWTEVLRVERIWSDQRIGFLPLGILPHTLPVTSSFSRLSPLFLAICPKNSKLLRAHVVL 221
           + +TE+L ++  +++  I  +   +    L + S+    + L L  C K     R H++L
Sbjct: 21  SNYTELLPIDMRFNEGHIVSI---VFYSVLMIISAIGNTTVLILITCRKRVSKSRIHIML 77

Query: 220 RCIGI 206
             + I
Sbjct: 78  MHLAI 82


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 425 GFFFLPMLIALRGY 466
           G FFLPML+ L  Y
Sbjct: 205 GSFFLPMLVMLYVY 218


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +2

Query: 107 CTLCLSLFNVLEENARDSLDRTQS 178
           C LCL   N +  N  +S +R  S
Sbjct: 355 CCLCLDSMNAVIRNFNESENRRNS 378


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,632
Number of Sequences: 438
Number of extensions: 4581
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)