Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4768
         (804 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0245 + 15995689-15995742,15995979-15996075,15996165-159961...    30   2.5  
03_03_0206 + 15447054-15447181,15448243-15448298,15448373-154485...    28   7.6  

>09_04_0245 +
           15995689-15995742,15995979-15996075,15996165-15996185,
           15996442-15996573,15996707-15996834,15996919-15997203,
           15997391-15997521,15999700-15999817,16000609-16000703,
           16001437-16001511,16001860-16001911,16002767-16002859,
           16003625-16003690,16003785-16003867,16003942-16004054,
           16005271-16005410,16005569-16005643,16006084-16006160,
           16006426-16006514,16008039-16008085,16009004-16009138,
           16009298-16009345,16009605-16009667,16009709-16009730,
           16010284-16010458,16014250-16014321,16014887-16014958,
           16015904-16016005,16016197-16016225,16016333-16016403,
           16016549-16016597,16016684-16016784,16017495-16017623,
           16017683-16017752,16017975-16018194,16019368-16019389,
           16019457-16019604,16021569-16021693,16022344-16022774,
           16022984-16023110,16023241-16023292,16023351-16023502
          Length = 1461

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 29  KFIKSLLIMRIYNDKWFFLLPYL 97
           K +++L+I  + ND W FL+PYL
Sbjct: 573 KHVENLVIPSVRNDDWGFLVPYL 595


>03_03_0206 +
           15447054-15447181,15448243-15448298,15448373-15448515,
           15448630-15448827,15448901-15449100,15449585-15449684,
           15449769-15450350,15450434-15450556,15451028-15451108,
           15451188-15451495,15451577-15451816,15452261-15452345,
           15452429-15452606,15453053-15453227,15453826-15453982
          Length = 917

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 605 IFLNYKDYVIYFRYKHNRDEVYIY 534
           I +  KDYV Y   +H+ D +YI+
Sbjct: 149 IKMKLKDYVFYMELQHDEDPLYIF 172


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,396,457
Number of Sequences: 37544
Number of extensions: 283326
Number of successful extensions: 452
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)