Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4758
         (446 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-50|CAD56259.3|  837|Caenorhabditis elegans Hypothetical p...    30   0.88 
Z50005-1|CAA90294.1|  334|Caenorhabditis elegans Hypothetical pr...    29   1.2  
AC024817-2|AAU87810.1|  520|Caenorhabditis elegans Hypothetical ...    29   1.2  
Z95622-1|CAB09132.2|  480|Caenorhabditis elegans Hypothetical pr...    28   2.7  
Z68131-3|CAA92219.2|  480|Caenorhabditis elegans Hypothetical pr...    28   2.7  
AF497823-1|AAM18101.1|  479|Caenorhabditis elegans putative Na-H...    28   2.7  
Z83116-5|CAB05568.2|  450|Caenorhabditis elegans Hypothetical pr...    28   3.6  
AL031635-11|CAA21038.3|  446|Caenorhabditis elegans Hypothetical...    27   6.2  

>Z99281-50|CAD56259.3|  837|Caenorhabditis elegans Hypothetical
           protein Y57G11C.37 protein.
          Length = 837

 Score = 29.9 bits (64), Expect = 0.88
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 87  QTLVTLFANRNHSSFYEYAITFVSTLLFKNNLNLMVACNLINTLINFEINVF 242
           +++++++A R    F E  I F   LLF     L   C LIN LI   ++ F
Sbjct: 613 ESVMSVYA-RPLDDFLEMFIQFGYVLLFSPAFPLAAVCALINNLIEIRVDAF 663


>Z50005-1|CAA90294.1|  334|Caenorhabditis elegans Hypothetical
           protein F16H9.2 protein.
          Length = 334

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = +3

Query: 63  HYSNAHAKQTLVTLFANRNHSSFYEYAITFVSTLL----FKNNLNLMVACNLINTLINFE 230
           H++    K  +++  AN+N+ SF      F  T+        NL   + C L+N LI  E
Sbjct: 173 HFTQVILKSAVISYNANQNYMSFPNKIDIFPETVTEGTSISVNLQNRIRCRLVNRLI--E 230

Query: 231 INVFGKSLLL 260
           + V  + +LL
Sbjct: 231 LKVTHEEMLL 240


>AC024817-2|AAU87810.1|  520|Caenorhabditis elegans Hypothetical
           protein Y54G2A.38 protein.
          Length = 520

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +3

Query: 60  LHYSNAHAKQTLVTLFA-NRNHSSFYEYAITFVSTLLFKNNLNLMVACNLINT 215
           LH+ NA+ +  +VTL A NR  S F+ +    + ++LF  +L  ++   +  T
Sbjct: 98  LHFGNAYFQYFMVTLMAVNRTTSIFFYFVNEKIWSILFPLSLGAVILVEVFFT 150


>Z95622-1|CAB09132.2|  480|Caenorhabditis elegans Hypothetical
           protein B0395.1 protein.
          Length = 480

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
 Frame = +3

Query: 126 SFYEYAITFVSTLLFKNNLNLMVACNLINTLINFEIN------VFGKSLL 257
           +FY++ IT V TLLF   ++ +    +++      +N      VFG+SLL
Sbjct: 92  NFYDFNITIVDTLLFSTVISAVDPVAVLSVFEEIHVNKLLYITVFGESLL 141


>Z68131-3|CAA92219.2|  480|Caenorhabditis elegans Hypothetical
           protein B0395.1 protein.
          Length = 480

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
 Frame = +3

Query: 126 SFYEYAITFVSTLLFKNNLNLMVACNLINTLINFEIN------VFGKSLL 257
           +FY++ IT V TLLF   ++ +    +++      +N      VFG+SLL
Sbjct: 92  NFYDFNITIVDTLLFSTVISAVDPVAVLSVFEEIHVNKLLYITVFGESLL 141


>AF497823-1|AAM18101.1|  479|Caenorhabditis elegans putative Na-H
           exchanger isoform 1 protein.
          Length = 479

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
 Frame = +3

Query: 126 SFYEYAITFVSTLLFKNNLNLMVACNLINTLINFEIN------VFGKSLL 257
           +FY++ IT V TLLF   ++ +    +++      +N      VFG+SLL
Sbjct: 91  NFYDFNITIVDTLLFSTVISAVDPVAVLSVFEEIHVNKLLYITVFGESLL 140


>Z83116-5|CAB05568.2|  450|Caenorhabditis elegans Hypothetical
           protein M01B2.6 protein.
          Length = 450

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 13/51 (25%), Positives = 22/51 (43%)
 Frame = +3

Query: 63  HYSNAHAKQTLVTLFANRNHSSFYEYAITFVSTLLFKNNLNLMVACNLINT 215
           +YS     +  +   +   H+ F    +TF  TL+F+N    M   N+  T
Sbjct: 98  YYSGTSDSEITINQVSKLTHAIFAFVQLTFDGTLVFRNKNRFMALRNIAKT 148


>AL031635-11|CAA21038.3|  446|Caenorhabditis elegans Hypothetical
           protein Y47D3B.3 protein.
          Length = 446

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +3

Query: 237 VFGKSLLLSKFVNFCIANSDGVTIQHKMLTNVL 335
           +FG++ L+SK++  CI+  D   I  K+ T ++
Sbjct: 15  IFGQNFLISKYLRTCISLLDPQLIDLKLQTRMV 47


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,409,036
Number of Sequences: 27780
Number of extensions: 143149
Number of successful extensions: 304
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 304
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)