Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4753
         (563 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024213-1|ABC86275.1| 1354|Drosophila melanogaster RE29404p pro...    28   7.6  
BT023599-1|AAY84999.2|  183|Drosophila melanogaster IP06716p pro...    28   7.6  
AE014298-2866|AAF48967.1|  183|Drosophila melanogaster CG12231-P...    28   7.6  
AE014297-634|AAF53998.3| 1354|Drosophila melanogaster CG31146-PD...    28   7.6  

>BT024213-1|ABC86275.1| 1354|Drosophila melanogaster RE29404p
           protein.
          Length = 1354

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 426 ACLLFLRMSPVASAVCEKTIHHKGSSAFIDYQHSNSRFKYSASI 557
           AC+ +L +SPVAS +  + I   G SA  D+  SN   + +  I
Sbjct: 370 ACVNYLMVSPVASGLFHRAILMSG-SAMSDWAASNQSLQLTMQI 412


>BT023599-1|AAY84999.2|  183|Drosophila melanogaster IP06716p
           protein.
          Length = 183

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
 Frame = -2

Query: 343 LLMYTILRCLWNK*VLPTLQFEF-----NLTETACIHF*KCLSRL 224
           LL YT   C   K V+  L FEF     +LT   C HF  CL+ L
Sbjct: 97  LLGYTDFTCAEVKRVINLLGFEFRGTSYHLTSKNCNHFSNCLAHL 141


>AE014298-2866|AAF48967.1|  183|Drosophila melanogaster CG12231-PA
           protein.
          Length = 183

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
 Frame = -2

Query: 343 LLMYTILRCLWNK*VLPTLQFEF-----NLTETACIHF*KCLSRL 224
           LL YT   C   K V+  L FEF     +LT   C HF  CL+ L
Sbjct: 97  LLGYTDFTCAEVKRVINLLGFEFRGTSYHLTSKNCNHFSNCLAHL 141


>AE014297-634|AAF53998.3| 1354|Drosophila melanogaster CG31146-PD
           protein.
          Length = 1354

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 426 ACLLFLRMSPVASAVCEKTIHHKGSSAFIDYQHSNSRFKYSASI 557
           AC+ +L +SPVAS +  + I   G SA  D+  SN   + +  I
Sbjct: 370 ACVNYLMVSPVASGLFHRAILMSG-SAMSDWAASNQSLQLTMQI 412


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,366,077
Number of Sequences: 53049
Number of extensions: 364042
Number of successful extensions: 594
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)