Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4747
(608 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0264 - 1748883-1748888,1748943-1749017,1749453-1749868,175... 36 0.019
12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232 31 0.94
06_03_0828 + 25137782-25138312,25141349-25141588 30 1.2
05_07_0184 - 28253448-28253743,28253835-28254102,28254439-28255869 30 1.2
12_02_0130 + 14026460-14027017 30 1.6
10_01_0166 - 1875085-1875360,1875437-1875442 29 2.2
03_01_0607 + 4464669-4465367,4466212-4467369,4468005-4469114,446... 29 2.2
03_05_0145 + 21254448-21255488 29 2.9
09_04_0011 + 13703564-13703766,13704685-13705526,13705628-137057... 29 3.8
03_04_0156 + 17782647-17782970 29 3.8
02_04_0540 + 23748610-23748930,23749054-23749157,23749889-237500... 29 3.8
01_05_0194 - 19107143-19108055,19110864-19111132 29 3.8
12_02_0248 + 16413295-16414394,16416511-16416762,16416839-164170... 28 5.0
03_05_0478 - 24712157-24712177,24712206-24712260,24712377-247124... 28 5.0
01_05_0655 - 23972488-23973152,23973193-23973241,23973883-239739... 28 5.0
12_02_0796 + 23224357-23224427,23225714-23225810,23226335-232271... 28 6.7
07_01_0687 - 5197349-5198665 28 6.7
04_04_1647 + 35032328-35033803 28 6.7
02_05_0655 + 30668706-30668849,30669043-30669471 28 6.7
12_01_1091 + 11349034-11349438,11350581-11350748,11351189-113515... 27 8.8
07_01_0629 - 4695778-4696077,4696242-4696406,4696497-4696673,469... 27 8.8
06_03_0016 - 15444543-15444901,15445091-15445113,15445205-154456... 27 8.8
01_05_0535 - 23001864-23005052 27 8.8
>02_01_0264 -
1748883-1748888,1748943-1749017,1749453-1749868,
1750095-1750215,1750423-1750533,1750636-1750737,
1750896-1750989,1751145-1751194,1751323-1751424,
1751794-1751871,1751999-1752028,1752322-1753050
Length = 637
Score = 36.3 bits (80), Expect = 0.019
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = -2
Query: 271 APTLPTKPARDQPAGKLIAKGFAEAGGGEDTAMHSITTTESSDLRSR--SARGALLAMA- 101
A +PT AG A AE GGGED ++ SS LR R SA LL +
Sbjct: 4 AAVMPTPSMNSSSAGAAAAAAAAEGGGGEDERRARALSSSSSSLRQRAMSASSKLLRTSL 63
Query: 100 SRADRTALISLRNDIV 53
SR+ + A R+ V
Sbjct: 64 SRSSKGAAARQRSSKV 79
>12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232
Length = 1035
Score = 30.7 bits (66), Expect = 0.94
Identities = 31/111 (27%), Positives = 38/111 (34%)
Frame = +2
Query: 122 PGGPTPQIAAFRRGDTVHSGVLSTAGFREAFCYKLPGRLVPCRLRGQCGRSSG*TPAEGA 301
P PTP + R H S G P +P R R G G
Sbjct: 11 PPPPTPPPSPSNRN---HRHPASRVGAARGGPRSDPATPIPVSPRVSVMRRGGGGGGGGG 67
Query: 302 GGRREALHGPTNQQRYIENDILPRPDRGGRGARNEQVIAQLRTHRDIR*RR 454
GG G + + D PR DRG G R+++V R D R RR
Sbjct: 68 GGGGGGGGGRGGRGGHARRDARPRDDRGRDGPRDDRVRHGDRRPHDYRPRR 118
>06_03_0828 + 25137782-25138312,25141349-25141588
Length = 256
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 286 GSSARAPTLPTKPARDQPAGKLIAKGFAEAGGGED 182
G +A P+ PT+ RD+ + I +G E GGED
Sbjct: 222 GGTADRPSPPTRRERDREIEERILRGEEERSGGED 256
>05_07_0184 - 28253448-28253743,28253835-28254102,28254439-28255869
Length = 664
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 318 ASRLPPAPSAGVHPLER-PHCPRSRQGTSLPGSL 220
A+ LPP PSA V P++R P PR R+ L +
Sbjct: 421 AALLPPTPSAAVSPMQRKPTKPRRRRQLKLKAQI 454
>12_02_0130 + 14026460-14027017
Length = 185
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 307 AAGSFRWGSSARAPTLPTKPARDQPAGKLIAKGFAE 200
AAG F W AP P P QPA + A+G ++
Sbjct: 65 AAGWFTWYYFGAAPAPPVLPDHHQPAAPVEARGLSQ 100
>10_01_0166 - 1875085-1875360,1875437-1875442
Length = 93
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 253 KPARDQPAGKLIAKGFAEAGGGEDTAMHSITTTESSDLRSRS 128
+P R Q A + G AE GGG+DT + + +LRSR+
Sbjct: 5 QPTRQQAAAPAASSGAAEDGGGDDTVVDG--GGAALELRSRT 44
>03_01_0607 +
4464669-4465367,4466212-4467369,4468005-4469114,
4469273-4469314,4469496-4469572,4469671-4469755,
4469818-4469901,4469988-4470089,4470181-4470279,
4470794-4470919
Length = 1193
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = -2
Query: 184 DTAMHSITTTESSDLRSRSARGALLAMASRADRTALISLRNDIVDYCRYSSMTGDRAA 11
D+ H++TT + R+ GA++A A D++ ++L + D+C +T RAA
Sbjct: 413 DSDGHTVTTALKAPERTVKWHGAMVARALLEDQS--LTLAPSVPDWCSSLLLTASRAA 468
>03_05_0145 + 21254448-21255488
Length = 346
Score = 29.1 bits (62), Expect = 2.9
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = -2
Query: 313 TPAAGSFRWGSSAR-APTLPTKPARDQPAGKLIAKGFAEAGGGEDTAMHSITTTESSDLR 137
+PA+ R+G AP PT+P R+QPA + G G + + ES+ R
Sbjct: 143 SPASAQRRYGGGEHLAP--PTRPRREQPA---VVSGIG-CRSGRFSPSAARRAAESAVRR 196
Query: 136 SRSARGA--LLAMASRADRTALISLRND 59
+ SAR A +L +SR A SL +
Sbjct: 197 TNSAREADMMLPHSSRTPAAAKRSLNGN 224
>09_04_0011 +
13703564-13703766,13704685-13705526,13705628-13705704,
13706294-13706339,13706479-13706722,13710078-13710150,
13711119-13711235
Length = 533
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/69 (33%), Positives = 31/69 (44%)
Frame = -2
Query: 346 SLLIRRPV*GFTPAAGSFRWGSSARAPTLPTKPARDQPAGKLIAKGFAEAGGGEDTAMHS 167
S IR P+ G GSFR G++ R +LP+ A G G GGG D
Sbjct: 45 SCSIRAPLQG----RGSFRRGANIRFGSLPSSAAVATSGGGRGGGGVVVGGGGGDPWRRL 100
Query: 166 ITTTESSDL 140
+T S++L
Sbjct: 101 DGSTASTEL 109
>03_04_0156 + 17782647-17782970
Length = 107
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 41 TTIIHNVVPEADERCAICAGSHSQQRAP 124
TT +H VV A E+ GS S QRAP
Sbjct: 34 TTCVHRVVEAAQEKRTGGKGSRSHQRAP 61
>02_04_0540 +
23748610-23748930,23749054-23749157,23749889-23750063,
23750149-23750212,23750867-23750946,23751128-23751287,
23751415-23751476,23751607-23751666,23751824-23751882,
23752194-23752275,23752691-23752740,23752847-23752980,
23753508-23753590,23754070-23754142,23754461-23754477
Length = 507
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 274 RAPTLPTKPARDQPAGKLIAKGFAEAGGGE 185
R P PT R +P+ K +AKG AGGG+
Sbjct: 22 RPPNQPTNQPRLEPS-KTLAKGRGSAGGGD 50
>01_05_0194 - 19107143-19108055,19110864-19111132
Length = 393
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -2
Query: 280 SARAPTLPTKPA-RDQPAGKLIAKGFAEAGG 191
+ +APT+PTK A +D+ K +A G A+ G
Sbjct: 325 TGKAPTMPTKSAPKDRVKNKSVASGSAQMSG 355
>12_02_0248 +
16413295-16414394,16416511-16416762,16416839-16417055,
16417216-16417353,16417493-16417669,16417744-16417851,
16417925-16418392,16418493-16418570,16418673-16418756
Length = 873
Score = 28.3 bits (60), Expect = 5.0
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = -2
Query: 373 SW*YIILNVSLLIRRP-V*GFTPAAGSFRWGSSARAPTLPTKPARDQPAGKLIAKGFAEA 197
S+ Y IL V + IRR G T AA + RAP+ + AG+L+ +
Sbjct: 304 SYSYFILAVDVSIRRDGETGTTAAATIMLLPTELRAPSYTGEATVTPTAGQLLLSPSSCG 363
Query: 196 GGGEDTAMHSITTTESSDLRSRSARGALL 110
GG + S+ E S+ ++ A+L
Sbjct: 364 GGRSNMRRLSLGCREDSNPSDQAVSAAIL 392
>03_05_0478 -
24712157-24712177,24712206-24712260,24712377-24712473,
24712558-24713302,24713822-24714189,24714279-24714419,
24715480-24715849
Length = 598
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Frame = -3
Query: 390 RPPRSGRGSISFSMYRC*FVGPCKASRLPPA--PSAGVHPLERPHCPRSRQGTSLPGSL* 217
RPPRS G + + + FV P +S PPA P+A + S + +
Sbjct: 5 RPPRSSSGGVEPKIRQVGFVTPDASSSAPPAEPPAAAAAAVAAAAAAASSAAAAAAQAQA 64
Query: 216 QKASRKPAVERTP 178
PA E +P
Sbjct: 65 SSEGSPPASELSP 77
>01_05_0655 -
23972488-23973152,23973193-23973241,23973883-23973940,
23974184-23974215,23975961-23976040,23976509-23977898
Length = 757
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -2
Query: 232 AGKLIAKGFAEAGGGEDTAMHSITTTESSDLRSRSARGALLAMASRADRTALI 74
AG A+G G GE T M S ++ E S SA A+ A+A+ R +
Sbjct: 312 AGAAAARGVPPPGSGEGTGMTS-SSKEDMGGASGSAAAAVAAVAAEPSRLVFV 363
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 327 PCKASRLPPAPSAGVHPLERPHCPRSRQGTSLPGS 223
PCK+ P+PS GV P + P S + L G+
Sbjct: 232 PCKSFFPSPSPSPGVSPADVPGAASSSKKRRLSGA 266
>12_02_0796 +
23224357-23224427,23225714-23225810,23226335-23227146,
23227593-23227619,23227620-23229624
Length = 1003
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -2
Query: 244 RDQPAGKLIAKGFAEAGGGEDTAMHSITTTESSDLRSRS 128
RDQ + IA+GF G G+D + I + +DL SRS
Sbjct: 505 RDQLVKRWIAEGFINTGSGQD--LEKIGESYLNDLISRS 541
>07_01_0687 - 5197349-5198665
Length = 438
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = -3
Query: 324 CKASRLPPAPSAGVH---PLERPHCPRSRQGTSLPGS 223
C+A+ L P A VH PL PH R R + GS
Sbjct: 135 CRATLLNPITGAAVHLPEPLSTPHSLRGRSLSDFDGS 171
>04_04_1647 + 35032328-35033803
Length = 491
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = -3
Query: 315 SRLPPAPSAGVHPLERPHCPRSRQGTSLPGSL 220
SRL A A L RP PRSRQGT+ P S+
Sbjct: 47 SRLAAASLARAAHLARPR-PRSRQGTAPPPSV 77
>02_05_0655 + 30668706-30668849,30669043-30669471
Length = 190
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -3
Query: 399 LAPRPPRSGRGSISFSMYRC*FVGPCKASRLPPAPSAGVHPLERPHCPRSRQGTSLP 229
L PR + S S S+ R V PC A PP P+A + + P SR+ P
Sbjct: 42 LVPRFKEVIKTSQSGSLLRLGLVSPCSA---PPLPTAAAYTPPHTNTPSSRRRHHAP 95
>12_01_1091 +
11349034-11349438,11350581-11350748,11351189-11351500,
11351995-11352063,11352177-11352269,11352642-11352844,
11354783-11355056,11355561-11355606,11355646-11355806
Length = 576
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 177 LCTVSPRRKAAI*GVGPPGARCWLWLPAQIAQRS 76
L +SPRR AI G G G+R +WLP + S
Sbjct: 539 LRVISPRRPDAIIGTG--GSRIEIWLPTSQTELS 570
>07_01_0629 -
4695778-4696077,4696242-4696406,4696497-4696673,
4697157-4697455,4697589-4697751,4697897-4698088,
4698211-4698385,4698527-4698741,4698948-4699385
Length = 707
Score = 27.5 bits (58), Expect = 8.8
Identities = 22/58 (37%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +2
Query: 227 PGRLVP-CRLRGQCGRSSG*TPAEGAGGRREALHGPTNQQRYIENDILPRPDRGGRGA 397
P RL P CR+ QCG GG R A+ P R D P RGG GA
Sbjct: 11 PLRLRPACRVASQCGGRPSTRRRGAGGGPRRAV--PQPPVRRPSGDRACTPWRGGVGA 66
>06_03_0016 -
15444543-15444901,15445091-15445113,15445205-15445618,
15445707-15445726
Length = 271
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -3
Query: 315 SRLPPAPSAGVHPLERPHCPRSRQGTSLP 229
S LPP HP P PRS T +P
Sbjct: 38 SALPPMSLGPAHPRSHPVVPRSTTATRIP 66
>01_05_0535 - 23001864-23005052
Length = 1062
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 318 ASRLPPAPSAGVHPLERPH 262
A RLPP P+ PL RPH
Sbjct: 48 AHRLPPTPTPDRPPLSRPH 66
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,789,817
Number of Sequences: 37544
Number of extensions: 406741
Number of successful extensions: 1596
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1594
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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