Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4741
         (464 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   1.6  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   1.6  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   1.6  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   1.6  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   2.1  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   6.5  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 272 PEIASHFEYKIYRCGTV 222
           P I  HF  +IYR GTV
Sbjct: 158 PLIPVHFALRIYRNGTV 174


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 272 PEIASHFEYKIYRCGTV 222
           P I  HF  +IYR GTV
Sbjct: 158 PLIPVHFALRIYRNGTV 174


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 272 PEIASHFEYKIYRCGTV 222
           P I  HF  +IYR GTV
Sbjct: 209 PLIPVHFALRIYRNGTV 225


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 272 PEIASHFEYKIYRCGTV 222
           P I  HF  +IYR GTV
Sbjct: 158 PLIPVHFALRIYRNGTV 174


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -1

Query: 149 PVVFLSTLTLNFNFECTLNEHQIKYLKLLISIEIKNDLTVS 27
           P  F  TL + +   C L   ++     LI+ EIK DL ++
Sbjct: 388 PATFQDTLEMKYLERCLLETLRMYPPVPLIAREIKTDLKLA 428


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -1

Query: 134 STLTLNFNFECTLNEHQIKYLKLLISIEIKNDLT 33
           S   +N   EC     ++   KLLIS    ++LT
Sbjct: 462 SLFRINLGIECGYEIKKLLRYKLLISQNAVSELT 495


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,713
Number of Sequences: 438
Number of extensions: 2491
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)