Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4736
         (735 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              24   1.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   3.0  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   6.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   9.1  

>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -3

Query: 724 ESTNKTSKNQWYGRQRLGSTCCSLVSLKLENGWTELANSDLELFV 590
           ++ NK   NQ+ G Q      CS+     E+ W ++  S    FV
Sbjct: 60  QAANKGMINQYGGEQPTLRLLCSIAGGTSESQWEDVTGSTPLTFV 104


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +1

Query: 259 DENYVQSPRWINGTTKDCLSRIVNYSCNPHV 351
           +E+  Q P  ++      +S  +N+SC+P++
Sbjct: 556 NESEEQCPYTVDAAIYGNISHFINHSCDPNL 586


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 472 NKQKGSVRRGTHQRENK 522
           NKQ G+ + G  Q +NK
Sbjct: 488 NKQNGNRQNGNKQNDNK 504


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -1

Query: 621 NWLILIWNYLWKSREGLK 568
           NWL + W   W+  E  K
Sbjct: 163 NWLSVFWGSAWQWNEERK 180


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,927
Number of Sequences: 438
Number of extensions: 4163
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)