Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4735
         (694 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR533535-1|CAG38566.1|  438|Homo sapiens TSPYL protein.                31   5.2  
L36463-1|AAB67270.1|  783|Homo sapiens ras interactor protein.         30   6.8  
BC014417-1|AAH14417.1|  783|Homo sapiens Ras and Rab interactor ...    30   6.8  
AB209445-1|BAD92682.1|  651|Homo sapiens ras inhibitor RIN1 vari...    30   6.8  

>CR533535-1|CAG38566.1|  438|Homo sapiens TSPYL protein.
          Length = 438

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +1

Query: 370 DPAGYPGTPSLVIVLTAGTPLL*PGSDPGRRSDVGCESAGESF*CGRALKRTL-GPQSAP 546
           DPAG  GTP + +V   G   +  G + G+    G  +A       R+LK+ + G + A 
Sbjct: 73  DPAGRGGTPQIRVVGGRGHVAIKAGQEEGQPPAEGLAAASVVMAADRSLKKGVQGGEKAL 132

Query: 547 NIC 555
            IC
Sbjct: 133 EIC 135


>L36463-1|AAB67270.1|  783|Homo sapiens ras interactor protein.
          Length = 783

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = -3

Query: 488 PALSHPTSDLRPGSEPGQSRGVPAVNTITRLGVPGY--PAGSEPA 360
           PA+  P   + PG+ P Q+  +P    + R    GY  PAGS P+
Sbjct: 260 PAVPPPPVPVLPGAVPSQTERLPPCQLLRRESSVGYRVPAGSGPS 304


>BC014417-1|AAH14417.1|  783|Homo sapiens Ras and Rab interactor 1
           protein.
          Length = 783

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = -3

Query: 488 PALSHPTSDLRPGSEPGQSRGVPAVNTITRLGVPGY--PAGSEPA 360
           PA+  P   + PG+ P Q+  +P    + R    GY  PAGS P+
Sbjct: 260 PAVPPPPVPVLPGAVPSQTERLPPCQLLRRESSVGYRVPAGSGPS 304


>AB209445-1|BAD92682.1|  651|Homo sapiens ras inhibitor RIN1 variant
           protein.
          Length = 651

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = -3

Query: 488 PALSHPTSDLRPGSEPGQSRGVPAVNTITRLGVPGY--PAGSEPA 360
           PA+  P   + PG+ P Q+  +P    + R    GY  PAGS P+
Sbjct: 128 PAVPPPPVPVLPGAVPSQTERLPPCQLLRRESSVGYRVPAGSGPS 172


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,038,106
Number of Sequences: 237096
Number of extensions: 2256920
Number of successful extensions: 4683
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4683
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)