Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4735
         (694 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025208-1|ABF17899.1|  585|Drosophila melanogaster FI01108p pro...    30   3.4  
AY094772-1|AAM11125.1|  585|Drosophila melanogaster GM14102p pro...    30   3.4  
AE014297-302|AAF51992.2|  585|Drosophila melanogaster CG2161-PA,...    30   3.4  
AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipp...    29   6.0  
AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,...    29   6.0  
AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,...    29   6.0  

>BT025208-1|ABF17899.1|  585|Drosophila melanogaster FI01108p
           protein.
          Length = 585

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
 Frame = -3

Query: 605 RGHCARGGGGLVGLDNLQIFGADCGPKVLFRALPH*NDSPALSH---PTSDLRPGSEPGQ 435
           RG    GGGG   L+N  +FG   G      AL    + P+L++         P S P Q
Sbjct: 127 RGGYGTGGGGGGPLNNFHVFGGGGGSDTSTPALLDPTEFPSLTNARGQNDQTLPQSNPLQ 186

Query: 434 SRG-VPAVNTITRLGVPGYPAGSE 366
             G  P  N  T  G+   P   +
Sbjct: 187 PPGSKPYGNFFTSFGMVKQPTSEQ 210


>AY094772-1|AAM11125.1|  585|Drosophila melanogaster GM14102p
           protein.
          Length = 585

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
 Frame = -3

Query: 605 RGHCARGGGGLVGLDNLQIFGADCGPKVLFRALPH*NDSPALSH---PTSDLRPGSEPGQ 435
           RG    GGGG   L+N  +FG   G      AL    + P+L++         P S P Q
Sbjct: 127 RGGYGTGGGGGGPLNNFHVFGGGGGSDTSTPALLDPTEFPSLTNARGQNDQTLPQSNPLQ 186

Query: 434 SRG-VPAVNTITRLGVPGYPAGSE 366
             G  P  N  T  G+   P   +
Sbjct: 187 PPGSKPYGNFFTSFGMVKQPTSEQ 210


>AE014297-302|AAF51992.2|  585|Drosophila melanogaster CG2161-PA,
           isoform A protein.
          Length = 585

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
 Frame = -3

Query: 605 RGHCARGGGGLVGLDNLQIFGADCGPKVLFRALPH*NDSPALSH---PTSDLRPGSEPGQ 435
           RG    GGGG   L+N  +FG   G      AL    + P+L++         P S P Q
Sbjct: 127 RGGYGTGGGGGGPLNNFHVFGGGGGSDTSTPALLDPTEFPSLTNARGQNDQTLPQSNPLQ 186

Query: 434 SRG-VPAVNTITRLGVPGYPAGSE 366
             G  P  N  T  G+   P   +
Sbjct: 187 PPGSKPYGNFFTSFGMVKQPTSEQ 210


>AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin
           Nipped-B protein.
          Length = 2077

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = -3

Query: 185 VYITQRNLASQTENTLEFIDSQILQHTLCKVF*LQLICIVESLIIDL 45
           VY+  RN  + TE+  EF+D ++++  L  +    LIC + S + DL
Sbjct: 572 VYLA-RNYFAGTEDEDEFVDDEVIEKLLNAMDACLLICNIYSTVSDL 617


>AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,
           isoform F protein.
          Length = 2077

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = -3

Query: 185 VYITQRNLASQTENTLEFIDSQILQHTLCKVF*LQLICIVESLIIDL 45
           VY+  RN  + TE+  EF+D ++++  L  +    LIC + S + DL
Sbjct: 572 VYLA-RNYFAGTEDEDEFVDDEVIEKLLNAMDACLLICNIYSTVSDL 617


>AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,
           isoform E protein.
          Length = 2077

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = -3

Query: 185 VYITQRNLASQTENTLEFIDSQILQHTLCKVF*LQLICIVESLIIDL 45
           VY+  RN  + TE+  EF+D ++++  L  +    LIC + S + DL
Sbjct: 572 VYLA-RNYFAGTEDEDEFVDDEVIEKLLNAMDACLLICNIYSTVSDL 617


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,858,851
Number of Sequences: 53049
Number of extensions: 639220
Number of successful extensions: 1679
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1679
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)