Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4718
         (627 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0922 + 7278912-7279274,7281449-7281572,7282489-7282604,728...    29   2.3  

>01_01_0922 +
           7278912-7279274,7281449-7281572,7282489-7282604,
           7282683-7282748,7283379-7283413,7283559-7283601,
           7284325-7284362,7284448-7284555,7287195-7287252,
           7287862-7288003,7288215-7288426,7288544-7288778,
           7288874-7288941,7290329-7290602,7291137-7291249,
           7291330-7291390,7292170-7292237,7292585-7292622,
           7292699-7292888
          Length = 783

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -2

Query: 482 WGGVCDLSDGGSIGDFG 432
           WGG  DL DGG+ GD G
Sbjct: 16  WGGEADLEDGGAGGDHG 32


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,770,159
Number of Sequences: 37544
Number of extensions: 165712
Number of successful extensions: 507
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)