Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4717
         (673 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    27   0.12 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   3.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   8.1  

>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -1

Query: 337 DILTQIDR*KLFLLFIFNTSLCHKICNILFQFINSASHFIN 215
           D LT  +  ++F+  IF  S C  +  I++ +    SH +N
Sbjct: 200 DYLTDTNEIRIFVATIFTFSYCIPMILIIYYYSQIVSHVVN 240


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 125 NMQEVTQYVQSLLQNMQDK 181
           N Q+ TQY+     N+Q+K
Sbjct: 391 NTQQFTQYIPESSSNLQEK 409


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -2

Query: 66  RVRFCHIKENKIYSNV 19
           R+++   KEN++Y+N+
Sbjct: 329 RIQYAQHKENELYANL 344


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -2

Query: 66  RVRFCHIKENKIYSNV 19
           R+++   KEN++Y+N+
Sbjct: 367 RIQYAQHKENELYANL 382


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/27 (25%), Positives = 17/27 (62%)
 Frame = -2

Query: 111 AGVEYSFSCVFNNIVRVRFCHIKENKI 31
           +G+E   +  FN +  ++  H+++N+I
Sbjct: 828 SGIESIQNRTFNGLNNLQILHLEDNRI 854


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,761
Number of Sequences: 438
Number of extensions: 3987
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)