Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4714
(549 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.11
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 31 0.11
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 0.79
SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit Apc1|Sc... 28 1.0
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.0
SPBC530.15c ||SPBC661.01|spermidine family transporter |Schizosa... 28 1.0
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 28 1.0
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 27 1.4
SPAC10F6.17c ||SPAC56E4.01c|mitochondrial pyruvate dehydrogenase... 27 1.8
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 26 3.2
SPCC645.09 |mrpl37||mitochondrial ribosomal protein subunit L37|... 26 3.2
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 26 4.2
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 26 4.2
SPBP35G2.07 |ilv1||acetolactate synthase catalytic subunit|Schiz... 26 4.2
SPAC17A2.09c |csx1||RNA-binding protein Csx1|Schizosaccharomyces... 25 5.6
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 25 7.3
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 25 7.3
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 25 9.7
SPAC1002.18 |urg3||DUF1688 family protein|Schizosaccharomyces po... 25 9.7
SPBC36.03c |||spermidine family transporter |Schizosaccharomyces... 25 9.7
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 25 9.7
SPBC215.04 |git11||heterotrimeric G protein gamma subunit Git11 ... 25 9.7
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ... 25 9.7
SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase |Schizosaccha... 25 9.7
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 31.1 bits (67), Expect = 0.11
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 8/111 (7%)
Frame = -1
Query: 543 VPSAEQKQSGRTHWL-GSQSGALFGSSSTVQAFSSDSSLQSGLP------LQNNSFSMQS 385
+PS S + L S S + SSS+ + S SS S P + ++S S S
Sbjct: 240 IPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSS 299
Query: 384 PL-PQANLPSGQIGSSVFKIGKTFRGFSSLSQLFTLPFQSQVCLSRSKANP 235
P + + S SS F + SS S + P S +S S ++P
Sbjct: 300 PTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSP 350
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 31.1 bits (67), Expect = 0.11
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -2
Query: 443 RIHLCSLVYHYRTILFQCNLRCHKPIYLQDK*VRPFS--RLVKLFVASRVCHSCSLYP 276
R L LV + ++I F+C RC + Y P S R + F+ VC+ CS++P
Sbjct: 300 RESLSILVNYCKSIRFRC-FRCRRVEYFFYLDSNPLSIQRTITHFIKKLVCNECSMHP 356
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 28.3 bits (60), Expect = 0.79
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = -1
Query: 540 PSAEQKQSGRTHWLGSQSGALFGSSSTVQAFSSDSSLQSGLPLQNNSFSMQSPLPQANLP 361
PS+ S + S S + SSS+ + SS SS S ++S S S +P +
Sbjct: 155 PSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSST 214
Query: 360 SGQIGSS 340
S SS
Sbjct: 215 SSSHSSS 221
Score = 25.0 bits (52), Expect = 7.3
Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 3/127 (2%)
Frame = -1
Query: 540 PSAEQKQSGRTHWLGSQSGALFGSSSTVQAFSSDSSLQSGLPLQNNSFSMQSPLPQANLP 361
PS+ + + S S + SSS+ + SS SS S ++S S S ++
Sbjct: 144 PSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 203
Query: 360 SGQ---IGSSVFKIGKTFRGFSSLSQLFTLPFQSQVCLSRSKANPDGQVICLRPDLVHLT 190
S I SS + SS S + P S ++ ++ + + P +
Sbjct: 204 SSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVTPSSSSSS 263
Query: 189 TSRQSPS 169
TS + PS
Sbjct: 264 TSSEVPS 270
>SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit
Apc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1458
Score = 27.9 bits (59), Expect = 1.0
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 137 YRRTTDQRSAHLQLRRHL--VASHEKYCIPANQ 45
+ RTT AHLQ R+L +A E+ IP NQ
Sbjct: 1226 FPRTTQDNRAHLQAARNLWALAVEERCIIPRNQ 1258
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 27.9 bits (59), Expect = 1.0
Identities = 24/79 (30%), Positives = 32/79 (40%)
Frame = -1
Query: 471 SSSTVQAFSSDSSLQSGLPLQNNSFSMQSPLPQANLPSGQIGSSVFKIGKTFRGFSSLSQ 292
SSS+V SS S L S +S S SPL ++ S S + + + SS S
Sbjct: 36 SSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSS 95
Query: 291 LFTLPFQSQVCLSRSKANP 235
S S S A+P
Sbjct: 96 ASLTSSSSATLTSSSSASP 114
>SPBC530.15c ||SPBC661.01|spermidine family transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 516
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 384 PLPQANLPSGQIGSSVFKIG 325
P+P+A LPS IG VF IG
Sbjct: 380 PVPEARLPSMMIGCIVFPIG 399
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 27.9 bits (59), Expect = 1.0
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = -1
Query: 543 VPSAEQKQSGR---THWLGSQSGALFGSSSTVQAFSSDSSLQSGLPLQNNSFSMQSPLPQ 373
+PS E+ S R T + + G + + S D++LQS PL+ +S +
Sbjct: 498 LPSVEEDSSNRDKKTDIADLHTDSKVGIADVLSPISPDAALQSDGPLKKAKEPEESSITP 557
Query: 372 ANLPSGQIGSSV 337
PS +G S+
Sbjct: 558 TTPPSFNVGESL 569
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 27.5 bits (58), Expect = 1.4
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +2
Query: 230 PSGLAFDLDKQTCDWKGKVNNCDKLEKPRKVLPILKTDEPICPEGKLACGSGDCIE 397
PSG+ ++ K T W G N + R + + + E C GK+ G +E
Sbjct: 573 PSGVCLEIKKGTFSWSGPGQNAAE-PTLRDIDFVARRGELCCIVGKVGMGKSSLLE 627
>SPAC10F6.17c ||SPAC56E4.01c|mitochondrial pyruvate dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 444
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 182 RDVVRCTRSGLKQITCPSGLAFDLDKQTCDWKGKVNN 292
R++ +CT S Q CPS LA LDK + KV++
Sbjct: 142 RELQKCTASYYHQNACPSSLA--LDKSISEAFAKVDH 176
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = -1
Query: 447 SSDSSLQSGLPLQNNSFSMQSPLPQANLPSGQIGSSVFKIGKTFRGF 307
+S LQ P+Q+++F+ +P P +P I ++ +G ++ F
Sbjct: 271 ASADRLQKNHPVQSSNFNPYTPAPSITVPPNYIPNTAM-MGPSYSSF 316
>SPCC645.09 |mrpl37||mitochondrial ribosomal protein subunit
L37|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 26.2 bits (55), Expect = 3.2
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Frame = -1
Query: 282 LPF-QSQVCLSRSKANPDGQVICLRPDLVHLTTSRQSPSVVRRKYSSAGL----PSHN 124
+PF +S LSR+ Q C LV ++ S S+V+R Y S+ + P HN
Sbjct: 1 MPFIESMAPLSRAITRGISQFSCYSNTLVLRSSRNSSSSLVKRSYVSSRVSPKKPQHN 58
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -1
Query: 414 LQNNSFSMQSPLPQANLPS-GQIGSSVFK 331
L+ NSF + P+P ++PS I S VFK
Sbjct: 305 LKKNSFCLYLPIPLTSIPSTPSIRSHVFK 333
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 431 KDESDENACTVELDPNRAPDCDPNQCVLPDCFCSAD 538
K +SD VELD + DP+ VLP+ ++D
Sbjct: 295 KSKSDRRKRLVELDAENENENDPSDFVLPNGQSNSD 330
>SPBP35G2.07 |ilv1||acetolactate synthase catalytic
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 669
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 200 TRSGLKQITCPSGLAFDLDKQTCDWKGKV 286
TRS ++ P + +LDKQT D K KV
Sbjct: 461 TRSAPGELVKPQEVIQELDKQTSDIKDKV 489
>SPAC17A2.09c |csx1||RNA-binding protein Csx1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 480 LFGSSSTVQAFSSDSSLQSGLPLQNNSFSMQSPLPQANLPSGQIGS 343
+FG + +V +S SS SG L++ S ++ Q+ LP+ + S
Sbjct: 397 IFGMNQSVIGANSGSSNSSGSSLKSAPVSPRTAAAQSLLPNSVVSS 442
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 25.0 bits (52), Expect = 7.3
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +2
Query: 131 DGRPADEY--FRLTTEGDCRDVVRCTRSGLKQITCPSGLAFDLDKQTCDWKGKVNNCDKL 304
D RP Y F LT++ + C + + P + DL+K+ W+ +
Sbjct: 228 DVRPVSTYHSFALTSDNNSHLYGICV---VVWVAMPQSMQNDLEKECEVWRANNTTVEDR 284
Query: 305 EKPRKVLPILKTD 343
E K+L L+T+
Sbjct: 285 EVAEKLLSSLETE 297
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 25.0 bits (52), Expect = 7.3
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -1
Query: 468 SSTVQAFSSDSSLQSGLPLQNNSFSMQSPLPQANLPSGQIG--SSVFKIGKTFRGFSSLS 295
SS ++ SSD++ G PLQN F + + + + P ++ SS F + G S +S
Sbjct: 652 SSDFESKSSDNTSLDGTPLQNTDFKKVATV-EDDSPFDELDKFSSPFSSSSSRGGLSHIS 710
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 423 QTAKMNPMKMLALSNWTQIERLTVI 497
Q K+ P +LSNWT+ E L ++
Sbjct: 1647 QWVKLQPTNFDSLSNWTKEETLKLL 1671
>SPAC1002.18 |urg3||DUF1688 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 399
Score = 24.6 bits (51), Expect = 9.7
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -2
Query: 338 FSRLVKLFVASRVCHSCSLYPSSRRFVYQ-DRKPIQ 234
+ R L VAS C L+ S+ FVYQ D K +Q
Sbjct: 128 YGRSEGLAVASLRCFESGLFSSNPDFVYQVDGKALQ 163
>SPBC36.03c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 538
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 384 PLPQANLPSGQIGSSVFKIG 325
P+P+A LP IGS +F G
Sbjct: 402 PVPEARLPPMMIGSVLFPAG 421
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 24.6 bits (51), Expect = 9.7
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Frame = -1
Query: 504 WLGSQSGALFGSS--STVQAFSSDSSLQSGLPLQNNSFSMQSPLPQANLPSGQIGSSVFK 331
+LG + LFG + T + F + ++ + G + + F +P + G I
Sbjct: 39 FLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIF--HRVIPNFMIQGGDITKGDGT 96
Query: 330 IGKTFRGFSSLSQLFTLPFQSQVCLSRSKANPD 232
GK+ G + F L Q LS + A PD
Sbjct: 97 GGKSIYGSRFPDENFKLSHQRPGLLSMANAGPD 129
>SPBC215.04 |git11||heterotrimeric G protein gamma subunit Git11
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 72
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 135 VDPPMNISVSPPKVTAAMSS 194
+ PM +SV+PPK ++SS
Sbjct: 27 IPEPMMVSVAPPKANPSVSS 46
>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 24.6 bits (51), Expect = 9.7
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +1
Query: 1 RHGSTRVSVSRCVISWFA 54
+ G+ RV++ +C+I+W A
Sbjct: 179 QRGNGRVNIEKCLIAWMA 196
>SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 261 KPATGRVK*TTVTNSRSHEKFYQS 332
KP+TGR+ VTNS S ++ S
Sbjct: 247 KPSTGRISYLNVTNSYSGQELIPS 270
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,307,278
Number of Sequences: 5004
Number of extensions: 48298
Number of successful extensions: 181
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 227943826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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