Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4714
(549 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0133 - 14057469-14057497,14057516-14057581,14057770-140583... 30 1.1
03_02_0803 + 11365959-11366390,11366470-11366502,11367158-113672... 30 1.1
09_04_0042 - 14055885-14056142,14057508-14057774,14057859-140592... 30 1.4
07_01_0362 - 2667031-2667090,2667182-2667426,2667749-2669471,266... 30 1.4
05_07_0305 - 29097478-29097598,29097766-29097866,29098136-290982... 29 3.2
04_04_0434 - 25166947-25167867,25167977-25168039,25168146-25168163 29 3.2
02_01_0118 + 870911-871203,872559-872679,872975-873092,873218-87... 29 3.2
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 28 5.6
12_02_0228 + 15903452-15903812,15904153-15904202,15904615-159047... 27 7.5
12_01_0423 + 3337401-3337419,3337777-3338235,3338650-3338735,333... 27 7.5
11_06_0496 - 24325587-24326143,24326658-24327495,24327612-24327764 27 7.5
05_06_0137 + 25936516-25936606,25936716-25937268,25937436-259379... 27 7.5
02_05_0564 + 30003817-30005778 27 7.5
01_01_0109 + 795842-796065,796086-796302,796480-796533 27 7.5
10_08_0994 + 22107987-22108874 27 9.9
10_01_0148 + 1730930-1731131,1731387-1731826 27 9.9
06_03_1222 - 28521799-28521900,28521952-28522029,28522292-285243... 27 9.9
02_05_0316 - 27825871-27826509 27 9.9
>12_02_0133 - 14057469-14057497,14057516-14057581,14057770-14058363,
14058450-14058570,14058926-14059320,14059410-14059534,
14059646-14059876,14060012-14060484,14060587-14060693,
14060842-14061172,14061222-14061250,14061345-14061901,
14062170-14062255,14062344-14062406,14062646-14063001,
14063101-14063356
Length = 1272
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 395 EKELFCNGKPDCKDESDENACTVELDPNRAP 487
+++L C+G D KD S+ AC +D N P
Sbjct: 1002 QQKLSCSGDEDTKDSSNSIACEAIIDVNTVP 1032
>03_02_0803 +
11365959-11366390,11366470-11366502,11367158-11367214,
11367784-11367945,11367987-11368139,11368218-11368295,
11368377-11368469,11368981-11369071,11369091-11369209
Length = 405
Score = 30.3 bits (65), Expect = 1.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 347 VRPFSRLVKLFVASRVCHSCSLYPSSR 267
++PF L V ++CH C+LYP+++
Sbjct: 202 LKPFKVCFILLVMEKMCHVCNLYPNNK 228
>09_04_0042 - 14055885-14056142,14057508-14057774,14057859-14059292,
14059378-14059539,14059642-14059768,14059869-14060200,
14060289-14061083,14061379-14061714,14061791-14062730,
14063338-14063588
Length = 1633
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = -1
Query: 507 HWLGSQSGALFGSSSTVQAFSSDSSLQSGLPLQNNSFSMQSPLPQANLPSGQIGSSVFKI 328
H + G + ST SS S +S L + +S + LP+ +LP G + S V I
Sbjct: 1045 HQAITNHGEMHQEPSTCPQCSSGSLRKSLLSREGHSMDTEIILPEIDLPVGMVDSFVHDI 1104
Query: 327 G 325
G
Sbjct: 1105 G 1105
>07_01_0362 -
2667031-2667090,2667182-2667426,2667749-2669471,
2669578-2669921,2670544-2670667,2671350-2671599,
2672486-2672571
Length = 943
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +3
Query: 123 SCATVDPPMNISVSPPKVTAAMSSGALGQVLNR*LARLDWL 245
S A DPP S SPP A S+GA A +DWL
Sbjct: 9 SAAPPDPPPR-SASPPATPVASSAGASSPPAQTNAASIDWL 48
>05_07_0305 -
29097478-29097598,29097766-29097866,29098136-29098288,
29098404-29098542,29098649-29098719,29099022-29099333,
29099605-29099903,29100011-29100271,29100365-29100471,
29100588-29100739,29100816-29100970,29102946-29103141,
29103340-29103468,29103540-29103641,29103736-29103889,
29103970-29104058
Length = 846
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 440 SDENACTVELDPNRAPDCDPNQCVLP 517
S EN +++DP+ C P+ C+LP
Sbjct: 248 SRENELPLKVDPSNCKHCTPSYCLLP 273
>04_04_0434 - 25166947-25167867,25167977-25168039,25168146-25168163
Length = 333
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = +2
Query: 71 RVKRQDDDGAGDEPNADQLCDGRPADEYFRLTTEGDCR----DVVRCTRSGLKQITCPSG 238
R DDDG G D CD + A R E + R DV R L+ +T G
Sbjct: 169 RAHEDDDDGVGGAVFRDIWCDEKEAASLHRSAMEEEARRHSDDVARKELESLEVVTADDG 228
>02_01_0118 +
870911-871203,872559-872679,872975-873092,873218-873354,
873583-873684,873862-873954,875047-875119,875213-875478
Length = 400
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = -1
Query: 312 GFSSLSQLFTLPFQSQVCLSRSKANPDGQVICLRPDLVHLTTSRQSPSVVRRKY 151
G+S+ S+L + F S + R A + VIC P +VH +R P +V Y
Sbjct: 249 GYSN-SKLAQIKFSSMLH-RRIPAEAEINVICASPGIVHTNVARDLPKLVVAAY 300
>09_06_0147 + 21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -1
Query: 246 KANPDGQVICLRPDLVHLTTSRQSPSVVRRKYSSAGLP 133
KA PDG+ +V T+SR+ PS VRR + A LP
Sbjct: 1720 KAVPDGRDAIRELKIVDSTSSREQPSDVRR--APASLP 1755
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 246 KANPDGQVICLRPDLVHLTTSRQSPSVVRRKYSS 145
KA PDG+ +V T+SR+ PS VRR +S
Sbjct: 1428 KAVPDGRDAFRELKIVDSTSSREQPSDVRRAAAS 1461
>12_02_0228 +
15903452-15903812,15904153-15904202,15904615-15904713,
15907146-15907415,15908045-15908125,15909033-15909599,
15909677-15910053,15910326-15911613
Length = 1030
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = -1
Query: 495 SQSGALFGSSSTVQAFSSDSSLQSGLPLQNNSFSMQSPLPQANLPSGQIGSS 340
SQS ++ S S FSS SS +S L Q+ S + S P + P Q GS+
Sbjct: 744 SQSSSITTSGSVPFQFSSQSSSESSLAGQDKSKAASSSAPFSFSP--QFGST 793
>12_01_0423 +
3337401-3337419,3337777-3338235,3338650-3338735,
3338974-3339022,3339225-3339533,3339555-3339710,
3339871-3340086,3340404-3340906,3341050-3341116,
3341215-3341272,3341561-3341699,3341840-3341956,
3342069-3342246,3342459-3343093
Length = 996
Score = 27.5 bits (58), Expect = 7.5
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = -1
Query: 540 PSAEQKQSGRTHWLGSQSGALFGSSSTVQAFSSDSSLQSGLPLQNNSFSMQSPLPQANLP 361
PSA S T G S FGS+ST AF S+ G P ++ F +P A+ P
Sbjct: 90 PSAPAFGSMSTGAFGQPSAPAFGSTST-GAFGQPSTQAFGTP-SSSPFGSSTPAFGAS-P 146
Query: 360 SGQIG--SSVFKIGKT 319
+ G SS F G+T
Sbjct: 147 APVFGATSSTFGSGQT 162
>11_06_0496 - 24325587-24326143,24326658-24327495,24327612-24327764
Length = 515
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 170 EGDCRDVVRCTRSGLKQITCPSGLAFDLDKQTCDWKG 280
E DC DV C R C FD D TC W G
Sbjct: 177 ECDC-DVCCCRRGFCNLCMCVVCNGFDFDVNTCRWIG 212
>05_06_0137 +
25936516-25936606,25936716-25937268,25937436-25937932,
25938030-25938090,25938411-25938482,25938563-25938634,
25938730-25938810,25938918-25939081,25939174-25939442,
25939531-25939657,25939778-25939846,25939944-25940136,
25940232-25940733
Length = 916
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = -1
Query: 531 EQKQSGRTHWLGS---QSGALFGSSSTVQAFSSDSSLQSGLPLQNNSFSMQSPLPQANLP 361
++K + +W+G SG L G S+ AF++ +LQ+ L L NN+ + P + LP
Sbjct: 388 KEKYQVKKNWMGDPNLSSGGLSGEISS--AFANLKALQN-LDLSNNNLTGSIPDALSQLP 444
Query: 360 S 358
S
Sbjct: 445 S 445
>02_05_0564 + 30003817-30005778
Length = 653
Score = 27.5 bits (58), Expect = 7.5
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = -3
Query: 478 IWVQFDSASIFIGFIF---AVWFTITEQFF----FNAISAATSQFTFRTNRFVRFQDW*N 320
+W + + ++ I F ++WF I+ F A +F RTN+ R N
Sbjct: 448 LWSRNSTGALPISLFFTLLSLWFCISVPLTLLGGFFGTRAEPIEFPVRTNQIPREIPAKN 507
Query: 319 FSWLLEFVTVVHFTLPVAGLFIKI 248
+SWLL + TLP LFI++
Sbjct: 508 YSWLL---VLGAGTLPFGTLFIEL 528
>01_01_0109 + 795842-796065,796086-796302,796480-796533
Length = 164
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 68 SRVKRQDDDGAGDEPNADQ 124
S +R D+ GAGDEP+ D+
Sbjct: 21 SLTRRNDEPGAGDEPHVDR 39
>10_08_0994 + 22107987-22108874
Length = 295
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 381 AEIALKKNCSVMVNQTAKMNPMKMLALSNWTQIERLT 491
A++AL K VMV + A++ P++ + W Q+ L+
Sbjct: 188 AKMALAK-FMVMVTEAARLKPVRRAVVERWEQVSYLS 223
>10_01_0148 + 1730930-1731131,1731387-1731826
Length = 213
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 144 PMNISVSPPKVTAAMSSGALGQVLNR*LARLDW 242
P N+ + P +T +SSG LG R L + W
Sbjct: 50 PSNLQLRPGSLTMVISSGGLGASWRRGLRFIHW 82
>06_03_1222 -
28521799-28521900,28521952-28522029,28522292-28524335,
28525188-28525303
Length = 779
Score = 27.1 bits (57), Expect = 9.9
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -1
Query: 480 LFGSSSTVQAFSSDSSLQSGLP-LQNNS--FSMQSPLPQANLPSGQIGSSVFKIGKTFRG 310
L S S + S + L LP LQ++S F +Q +NL +GQ S +++ K
Sbjct: 130 LLFSRSIIVLDVSFNRLDGSLPELQSSSGGFPLQVLNISSNLFTGQFSSKLWEAMKNIVA 189
Query: 309 FSSLSQLFTLPFQSQVCLS 253
++ + FT S +C++
Sbjct: 190 LNASNNSFTGQIPSSICIN 208
>02_05_0316 - 27825871-27826509
Length = 212
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 317 KVLPILKTDEPICPEGKLACGSGDC 391
+ LP+++ DE + CG GDC
Sbjct: 92 EALPVVRFDELVASAPAAVCGGGDC 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,508,005
Number of Sequences: 37544
Number of extensions: 339540
Number of successful extensions: 1116
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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