Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4703
         (773 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    24   1.8  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    24   1.8  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   3.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   3.2  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   3.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   5.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   5.5  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 257 IYDDLFCYRILSVSVNK 307
           IYDD   Y I+S +VN+
Sbjct: 42  IYDDEITYNIISAAVNR 58


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 257 IYDDLFCYRILSVSVNK 307
           IYDD   Y I+S +VN+
Sbjct: 42  IYDDEITYNIISAAVNR 58


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 756 HRMDFVYYSSTIRTLSIFEIAMRAICVLNTFXYL 655
           H  D     ++ R L+I  +A   +C LNTF  L
Sbjct: 539 HHRDTPVVRASGRELTIILLAGVLVCYLNTFLLL 572


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 756 HRMDFVYYSSTIRTLSIFEIAMRAICVLNTFXYL 655
           H  D     ++ R L+I  +A   +C LNTF  L
Sbjct: 629 HHRDTPVVRASGRELTIILLAGVLVCYLNTFLLL 662


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 110 NQLAKEHKRS*VIIAVRRCRYIAN 181
           N LA EH RS +I A+R  + + N
Sbjct: 478 NDLATEHDRSVMIQAIRVVQKLVN 501


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 309 TRSSFSRVQGRWSDWPTLRNPPL 377
           +R  FS   G W D     +PPL
Sbjct: 38  SRVEFSNSSGAWLDCTATGSPPL 60


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 309 TRSSFSRVQGRWSDWPTLRNPPL 377
           +R  FS   G W D     +PPL
Sbjct: 38  SRVEFSNSSGAWLDCTATGSPPL 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,435
Number of Sequences: 438
Number of extensions: 3973
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)