Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4701
         (685 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69878-1|CAA49505.1| 1298|Homo sapiens protein ( H.sapiens Flt4 ...    31   2.9  
X68203-1|CAA48290.1| 1304|Homo sapiens FTL4 protein.                   31   2.9  
U43143-1|AAA85215.1| 1298|Homo sapiens Flt4 protein.                   31   2.9  
AY233383-1|AAO89505.1| 1363|Homo sapiens VEGFR3 long form protein.     31   2.9  
AY233382-1|AAO89504.1| 1298|Homo sapiens VEGFR3 short form protein.    31   2.9  
AB209637-1|BAD92874.1|  649|Homo sapiens Vascular endothelial gr...    31   2.9  

>X69878-1|CAA49505.1| 1298|Homo sapiens protein ( H.sapiens Flt4
           mRNA for transmembrane tyrosine kinase. ).
          Length = 1298

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1

Query: 139 RHNVKFELYIQLIYKVEQRTTITTSIYSQHLREWLQITQY 258
           R N+  EL + +  ++ ++   + SIYS+H R+ L  T Y
Sbjct: 409 RRNISLELVVNVPPQIHEKEASSPSIYSRHSRQALTCTAY 448


>X68203-1|CAA48290.1| 1304|Homo sapiens FTL4 protein.
          Length = 1304

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1

Query: 139 RHNVKFELYIQLIYKVEQRTTITTSIYSQHLREWLQITQY 258
           R N+  EL + +  ++ ++   + SIYS+H R+ L  T Y
Sbjct: 415 RRNISLELVVNVPPQIHEKEASSPSIYSRHSRQALTCTAY 454


>U43143-1|AAA85215.1| 1298|Homo sapiens Flt4 protein.
          Length = 1298

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1

Query: 139 RHNVKFELYIQLIYKVEQRTTITTSIYSQHLREWLQITQY 258
           R N+  EL + +  ++ ++   + SIYS+H R+ L  T Y
Sbjct: 409 RRNISLELVVNVPPQIHEKEASSPSIYSRHSRQALTCTAY 448


>AY233383-1|AAO89505.1| 1363|Homo sapiens VEGFR3 long form protein.
          Length = 1363

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1

Query: 139 RHNVKFELYIQLIYKVEQRTTITTSIYSQHLREWLQITQY 258
           R N+  EL + +  ++ ++   + SIYS+H R+ L  T Y
Sbjct: 409 RRNISLELVVNVPPQIHEKEASSPSIYSRHSRQALTCTAY 448


>AY233382-1|AAO89504.1| 1298|Homo sapiens VEGFR3 short form protein.
          Length = 1298

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1

Query: 139 RHNVKFELYIQLIYKVEQRTTITTSIYSQHLREWLQITQY 258
           R N+  EL + +  ++ ++   + SIYS+H R+ L  T Y
Sbjct: 409 RRNISLELVVNVPPQIHEKEASSPSIYSRHSRQALTCTAY 448


>AB209637-1|BAD92874.1|  649|Homo sapiens Vascular endothelial
           growth factor receptor 3 precursor variant protein.
          Length = 649

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1

Query: 139 RHNVKFELYIQLIYKVEQRTTITTSIYSQHLREWLQITQY 258
           R N+  EL + +  ++ ++   + SIYS+H R+ L  T Y
Sbjct: 107 RRNISLELVVNVPPQIHEKEASSPSIYSRHSRQALTCTAY 146


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,728,666
Number of Sequences: 237096
Number of extensions: 1162642
Number of successful extensions: 1232
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)