Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4699
(612 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC066650-1|AAH66650.1| 874|Homo sapiens coatomer protein comple... 160 4e-39
AF100756-1|AAD43020.1| 874|Homo sapiens coat protein gamma-cop ... 160 4e-39
AB047846-1|BAB17657.1| 874|Homo sapiens gamma1-COP protein. 160 4e-39
BC110796-1|AAI10797.1| 726|Homo sapiens COPG2 protein protein. 155 1e-37
AF207598-1|AAF19433.1| 871|Homo sapiens coat protein gamma2-COP... 155 1e-37
AF157833-1|AAF14271.1| 871|Homo sapiens nonclathrin coat protei... 155 1e-37
AB047847-1|BAB17658.1| 871|Homo sapiens gamma2-COP protein. 155 1e-37
BC017443-1|AAH17443.2| 865|Homo sapiens COPG2 protein protein. 155 2e-37
AK022934-1|BAB14315.1| 799|Homo sapiens protein ( Homo sapiens ... 70 6e-12
AY971956-1|AAY46814.1| 1892|Homo sapiens abnormal spindle-like m... 30 7.4
AY367065-1|AAR12641.1| 3477|Homo sapiens abnormal spindle-like m... 30 7.4
AY101201-1|AAM48745.1| 583|Homo sapiens abnormal spindle protein. 30 7.4
AY099893-1|AAM44122.1| 825|Homo sapiens abnormal spindle protei... 30 7.4
AY099891-1|AAM44120.1| 826|Homo sapiens abnormal spindle protei... 30 7.4
AL353809-5|CAH72552.1| 3477|Homo sapiens asp (abnormal spindle) ... 30 7.4
AF509326-1|AAN40011.1| 3477|Homo sapiens abnormal spindles protein. 30 7.4
>BC066650-1|AAH66650.1| 874|Homo sapiens coatomer protein complex,
subunit gamma protein.
Length = 874
Score = 160 bits (388), Expect = 4e-39
Identities = 79/120 (65%), Positives = 95/120 (79%), Gaps = 4/120 (3%)
Frame = +3
Query: 81 MKARRDGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEE 248
M + D K+E+S N FQ+L+K+ +LQEAR FN TP++PRKC HILTKILYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 249 LTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 428
L T EAT+ FFA TKLFQS D LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D Y
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNY 120
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 430 RPAAIRALCSITDSTMLQAI 489
R A+RALC ITDSTMLQAI
Sbjct: 121 RGPAVRALCQITDSTMLQAI 140
>AF100756-1|AAD43020.1| 874|Homo sapiens coat protein gamma-cop
protein.
Length = 874
Score = 160 bits (388), Expect = 4e-39
Identities = 79/120 (65%), Positives = 95/120 (79%), Gaps = 4/120 (3%)
Frame = +3
Query: 81 MKARRDGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEE 248
M + D K+E+S N FQ+L+K+ +LQEAR FN TP++PRKC HILTKILYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 249 LTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 428
L T EAT+ FFA TKLFQS D LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D Y
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNY 120
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 430 RPAAIRALCSITDSTMLQAI 489
R A+RALC ITDSTMLQAI
Sbjct: 121 RGPAVRALCQITDSTMLQAI 140
>AB047846-1|BAB17657.1| 874|Homo sapiens gamma1-COP protein.
Length = 874
Score = 160 bits (388), Expect = 4e-39
Identities = 79/120 (65%), Positives = 95/120 (79%), Gaps = 4/120 (3%)
Frame = +3
Query: 81 MKARRDGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEE 248
M + D K+E+S N FQ+L+K+ +LQEAR FN TP++PRKC HILTKILYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 249 LTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 428
L T EAT+ FFA TKLFQS D LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D Y
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNY 120
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 430 RPAAIRALCSITDSTMLQAI 489
R A+RALC ITDSTMLQAI
Sbjct: 121 RGPAVRALCQITDSTMLQAI 140
>BC110796-1|AAI10797.1| 726|Homo sapiens COPG2 protein protein.
Length = 726
Score = 155 bits (376), Expect = 1e-37
Identities = 74/115 (64%), Positives = 93/115 (80%), Gaps = 4/115 (3%)
Frame = +3
Query: 96 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQE 263
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 264 ATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 428
AT+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D Y
Sbjct: 66 ATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVY 120
Score = 33.5 bits (73), Expect = 0.60
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +1
Query: 430 RPAAIRALCSITDSTMLQAI 489
R AIRALC ITD TMLQAI
Sbjct: 121 RGPAIRALCRITDGTMLQAI 140
>AF207598-1|AAF19433.1| 871|Homo sapiens coat protein gamma2-COP
protein.
Length = 871
Score = 155 bits (376), Expect = 1e-37
Identities = 74/115 (64%), Positives = 93/115 (80%), Gaps = 4/115 (3%)
Frame = +3
Query: 96 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQE 263
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 264 ATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 428
AT+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D Y
Sbjct: 66 ATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVY 120
Score = 33.5 bits (73), Expect = 0.60
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +1
Query: 430 RPAAIRALCSITDSTMLQAI 489
R AIRALC ITD TMLQAI
Sbjct: 121 RGPAIRALCRITDGTMLQAI 140
>AF157833-1|AAF14271.1| 871|Homo sapiens nonclathrin coat protein
gamma2-COP protein.
Length = 871
Score = 155 bits (376), Expect = 1e-37
Identities = 74/115 (64%), Positives = 93/115 (80%), Gaps = 4/115 (3%)
Frame = +3
Query: 96 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQE 263
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 264 ATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 428
AT+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D Y
Sbjct: 66 ATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVY 120
Score = 33.5 bits (73), Expect = 0.60
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +1
Query: 430 RPAAIRALCSITDSTMLQAI 489
R AIRALC ITD TMLQAI
Sbjct: 121 RGPAIRALCRITDGTMLQAI 140
>AB047847-1|BAB17658.1| 871|Homo sapiens gamma2-COP protein.
Length = 871
Score = 155 bits (376), Expect = 1e-37
Identities = 74/115 (64%), Positives = 93/115 (80%), Gaps = 4/115 (3%)
Frame = +3
Query: 96 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQE 263
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 264 ATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 428
AT+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D Y
Sbjct: 66 ATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVY 120
Score = 33.5 bits (73), Expect = 0.60
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +1
Query: 430 RPAAIRALCSITDSTMLQAI 489
R AIRALC ITD TMLQAI
Sbjct: 121 RGPAIRALCRITDGTMLQAI 140
>BC017443-1|AAH17443.2| 865|Homo sapiens COPG2 protein protein.
Length = 865
Score = 155 bits (375), Expect = 2e-37
Identities = 71/105 (67%), Positives = 88/105 (83%)
Frame = +3
Query: 114 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTK 293
SN FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T EAT+ FFA T+
Sbjct: 10 SNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEATEAFFAMTR 69
Query: 294 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 428
LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D Y
Sbjct: 70 LFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVY 114
Score = 33.5 bits (73), Expect = 0.60
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +1
Query: 430 RPAAIRALCSITDSTMLQAI 489
R AIRALC ITD TMLQAI
Sbjct: 115 RGPAIRALCRITDGTMLQAI 134
>AK022934-1|BAB14315.1| 799|Homo sapiens protein ( Homo sapiens
cDNA FLJ12872 fis, clone NT2RP2003760, highly similar to
COATOMER GAMMA SUBUNIT. ).
Length = 799
Score = 70.1 bits (164), Expect = 6e-12
Identities = 32/47 (68%), Positives = 40/47 (85%)
Frame = +3
Query: 288 TKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 428
T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D Y
Sbjct: 2 TRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVY 48
Score = 33.5 bits (73), Expect = 0.60
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +1
Query: 430 RPAAIRALCSITDSTMLQAI 489
R AIRALC ITD TMLQAI
Sbjct: 49 RGPAIRALCRITDGTMLQAI 68
>AY971956-1|AAY46814.1| 1892|Homo sapiens abnormal spindle-like
microcephaly associated splice variant 1 protein.
Length = 1892
Score = 29.9 bits (64), Expect = 7.4
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +3
Query: 84 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 248
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 574 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 633
Query: 249 LTTQEATDIFFATTKL 296
L ++ TD+ T +
Sbjct: 634 LNLKKKTDLSIFRTPI 649
>AY367065-1|AAR12641.1| 3477|Homo sapiens abnormal spindle-like
microcephaly-associated protein protein.
Length = 3477
Score = 29.9 bits (64), Expect = 7.4
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +3
Query: 84 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 248
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 574 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 633
Query: 249 LTTQEATDIFFATTKL 296
L ++ TD+ T +
Sbjct: 634 LNLKKKTDLSIFRTPI 649
>AY101201-1|AAM48745.1| 583|Homo sapiens abnormal spindle protein.
Length = 583
Score = 29.9 bits (64), Expect = 7.4
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +3
Query: 84 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 248
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 463 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 522
Query: 249 LTTQEATDIFFATTKL 296
L ++ TD+ T +
Sbjct: 523 LNLKKKTDLSIFRTPI 538
>AY099893-1|AAM44122.1| 825|Homo sapiens abnormal spindle protein
ASP protein.
Length = 825
Score = 29.9 bits (64), Expect = 7.4
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +3
Query: 84 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 248
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 168 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 227
Query: 249 LTTQEATDIFFATTKL 296
L ++ TD+ T +
Sbjct: 228 LNLKKKTDLSIFRTPI 243
>AY099891-1|AAM44120.1| 826|Homo sapiens abnormal spindle protein
ASP protein.
Length = 826
Score = 29.9 bits (64), Expect = 7.4
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +3
Query: 84 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 248
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 168 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 227
Query: 249 LTTQEATDIFFATTKL 296
L ++ TD+ T +
Sbjct: 228 LNLKKKTDLSIFRTPI 243
>AL353809-5|CAH72552.1| 3477|Homo sapiens asp (abnormal spindle)
homolog, microcephaly associated (Drosophila) protein.
Length = 3477
Score = 29.9 bits (64), Expect = 7.4
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +3
Query: 84 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 248
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 574 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 633
Query: 249 LTTQEATDIFFATTKL 296
L ++ TD+ T +
Sbjct: 634 LNLKKKTDLSIFRTPI 649
>AF509326-1|AAN40011.1| 3477|Homo sapiens abnormal spindles protein.
Length = 3477
Score = 29.9 bits (64), Expect = 7.4
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +3
Query: 84 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 248
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 574 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 633
Query: 249 LTTQEATDIFFATTKL 296
L ++ TD+ T +
Sbjct: 634 LNLKKKTDLSIFRTPI 649
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,350,421
Number of Sequences: 237096
Number of extensions: 1801034
Number of successful extensions: 3597
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3597
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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