Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4699
(612 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113545-1|AAM29550.1| 878|Drosophila melanogaster RE62270p pro... 176 2e-44
AF191563-1|AAF05719.1| 879|Drosophila melanogaster coatomer pro... 174 9e-44
AE014297-4756|AAF57160.1| 879|Drosophila melanogaster CG1528-PA... 174 9e-44
BT001628-1|AAN71383.1| 883|Drosophila melanogaster RE37840p pro... 173 2e-43
AE014297-4757|AAN14275.1| 883|Drosophila melanogaster CG1528-PB... 173 2e-43
BT010031-1|AAQ22500.1| 1159|Drosophila melanogaster RE01344p pro... 30 2.8
AJ011778-1|CAA09771.1| 1160|Drosophila melanogaster Beta3 protei... 30 2.8
AF247194-1|AAF71924.1| 1160|Drosophila melanogaster ruby protein. 30 2.8
AE014298-634|AAF45950.1| 1160|Drosophila melanogaster CG11427-PA... 30 2.8
AY484405-1|AAR86939.1| 857|Drosophila melanogaster reverse tran... 28 8.6
AY484404-1|AAR86938.1| 857|Drosophila melanogaster reverse tran... 28 8.6
>AY113545-1|AAM29550.1| 878|Drosophila melanogaster RE62270p
protein.
Length = 878
Score = 176 bits (428), Expect = 2e-44
Identities = 84/118 (71%), Positives = 100/118 (84%)
Frame = +3
Query: 75 SIMKARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELT 254
S + + D ++ SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L
Sbjct: 3 SFRREKDDEEDGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLV 62
Query: 255 TQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 428
+EATD FFA TKLFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D Y
Sbjct: 63 AREATDCFFAMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLY 120
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1
Query: 430 RPAAIRALCSITDSTMLQAI 489
R AAIRALCSITD+TMLQA+
Sbjct: 121 RAAAIRALCSITDNTMLQAV 140
>AF191563-1|AAF05719.1| 879|Drosophila melanogaster coatomer
protein gamma subunit protein.
Length = 879
Score = 174 bits (423), Expect = 9e-44
Identities = 86/116 (74%), Positives = 98/116 (84%), Gaps = 3/116 (2%)
Frame = +3
Query: 90 RRDGKEED---SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQ 260
R EED SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L +
Sbjct: 6 REKDDEEDAGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAR 65
Query: 261 EATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 428
EATD FFA TKLFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D Y
Sbjct: 66 EATDCFFAMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLY 121
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1
Query: 430 RPAAIRALCSITDSTMLQAI 489
R AAIRALCSITD+TMLQA+
Sbjct: 122 RAAAIRALCSITDNTMLQAV 141
>AE014297-4756|AAF57160.1| 879|Drosophila melanogaster CG1528-PA,
isoform A protein.
Length = 879
Score = 174 bits (423), Expect = 9e-44
Identities = 86/116 (74%), Positives = 98/116 (84%), Gaps = 3/116 (2%)
Frame = +3
Query: 90 RRDGKEED---SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQ 260
R EED SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L +
Sbjct: 6 REKDDEEDAGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAR 65
Query: 261 EATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 428
EATD FFA TKLFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D Y
Sbjct: 66 EATDCFFAMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLY 121
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1
Query: 430 RPAAIRALCSITDSTMLQAI 489
R AAIRALCSITD+TMLQA+
Sbjct: 122 RAAAIRALCSITDNTMLQAV 141
>BT001628-1|AAN71383.1| 883|Drosophila melanogaster RE37840p
protein.
Length = 883
Score = 173 bits (420), Expect = 2e-43
Identities = 82/105 (78%), Positives = 94/105 (89%)
Frame = +3
Query: 114 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTK 293
SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L +EATD FFA TK
Sbjct: 21 SNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTK 80
Query: 294 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 428
LFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D Y
Sbjct: 81 LFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLY 125
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1
Query: 430 RPAAIRALCSITDSTMLQAI 489
R AAIRALCSITD+TMLQA+
Sbjct: 126 RAAAIRALCSITDNTMLQAV 145
>AE014297-4757|AAN14275.1| 883|Drosophila melanogaster CG1528-PB,
isoform B protein.
Length = 883
Score = 173 bits (420), Expect = 2e-43
Identities = 82/105 (78%), Positives = 94/105 (89%)
Frame = +3
Query: 114 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTK 293
SN +QNL+KT++LQE R FN TPV+PRKCIHILTKILYL+NQGE+L +EATD FFA TK
Sbjct: 21 SNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTK 80
Query: 294 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 428
LFQSKDVVLRR+VYL IKELS +A+DVIIVTSSLTKDMTGK+D Y
Sbjct: 81 LFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLY 125
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1
Query: 430 RPAAIRALCSITDSTMLQAI 489
R AAIRALCSITD+TMLQA+
Sbjct: 126 RAAAIRALCSITDNTMLQAV 145
>BT010031-1|AAQ22500.1| 1159|Drosophila melanogaster RE01344p
protein.
Length = 1159
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/45 (28%), Positives = 29/45 (64%)
Frame = +3
Query: 258 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSS 392
++A+D+F A K SK++ +++LVY+ + + QD+ +++ S
Sbjct: 55 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSIS 99
>AJ011778-1|CAA09771.1| 1160|Drosophila melanogaster Beta3 protein
protein.
Length = 1160
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/45 (28%), Positives = 29/45 (64%)
Frame = +3
Query: 258 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSS 392
++A+D+F A K SK++ +++LVY+ + + QD+ +++ S
Sbjct: 75 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSIS 119
>AF247194-1|AAF71924.1| 1160|Drosophila melanogaster ruby protein.
Length = 1160
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/45 (28%), Positives = 29/45 (64%)
Frame = +3
Query: 258 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSS 392
++A+D+F A K SK++ +++LVY+ + + QD+ +++ S
Sbjct: 75 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSIS 119
>AE014298-634|AAF45950.1| 1160|Drosophila melanogaster CG11427-PA
protein.
Length = 1160
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/45 (28%), Positives = 29/45 (64%)
Frame = +3
Query: 258 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSS 392
++A+D+F A K SK++ +++LVY+ + + QD+ +++ S
Sbjct: 75 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSIS 119
>AY484405-1|AAR86939.1| 857|Drosophila melanogaster reverse
transcriptase protein.
Length = 857
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 114 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILY 227
SN N D+TT+LQ+ +++N H + +HI+ Y
Sbjct: 785 SNHTPNFDETTILQQEQHYNKR--HTLEMLHIINTPTY 820
>AY484404-1|AAR86938.1| 857|Drosophila melanogaster reverse
transcriptase protein.
Length = 857
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 114 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILY 227
SN N D+TT+LQ+ +++N H + +HI+ Y
Sbjct: 785 SNHTPNFDETTILQQEQHYNKR--HTLEMLHIINTPTY 820
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,434,276
Number of Sequences: 53049
Number of extensions: 558788
Number of successful extensions: 1338
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1338
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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