Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4698
         (745 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p...    30   1.5  
Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U00049-2|AAC47052.2|  327|Caenorhabditis elegans Serpentine rece...    28   8.0  

>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical
           protein H05L14.2 protein.
          Length = 2162

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +1

Query: 202 FFITLVERRANSPPDGEWLPSPMDVS-NATSTVKLLPTQFYTLF 330
           + +++V    N P D  W  +PM+ + ++TST K +  +F+T F
Sbjct: 214 WMVSMVNFPNNIPADVRWKYAPMETNYSSTSTFKKILLRFFTFF 257


>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
           protein H05L14.2 protein.
          Length = 2162

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +1

Query: 202 FFITLVERRANSPPDGEWLPSPMDVS-NATSTVKLLPTQFYTLF 330
           + +++V    N P D  W  +PM+ + ++TST K +  +F+T F
Sbjct: 214 WMVSMVNFPNNIPADVRWKYAPMETNYSSTSTFKKILLRFFTFF 257


>Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical
           protein T23G5.2a protein.
          Length = 719

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -2

Query: 120 PGVKCLLEPIDVYNVNAPPTFRYIVIV 40
           PGV+CLL+ I++   N P T   +++V
Sbjct: 409 PGVQCLLKIIEIVEANYPETMGQVLVV 435


>U00049-2|AAC47052.2|  327|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 2 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = +1

Query: 304 LPTQFYTLFLIKCDACI-ITFASIAFLRMFSLHKYLCK 414
           L   FY LF++ C AC  +    I F R+F      C+
Sbjct: 64  LKQSFYILFIMSCIACFTLVVQDIFFARVFQYMTQFCE 101


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,980,992
Number of Sequences: 27780
Number of extensions: 350319
Number of successful extensions: 782
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)