Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4697
         (760 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017959-1|AAH17959.1|  291|Homo sapiens chromosome 2 open readi...    89   2e-17
AC097717-3|AAY24163.1|  291|Homo sapiens unknown protein.              89   2e-17
AK026208-1|BAB15393.1|  291|Homo sapiens protein ( Homo sapiens ...    88   3e-17

>BC017959-1|AAH17959.1|  291|Homo sapiens chromosome 2 open reading
           frame 47 protein.
          Length = 291

 Score = 89.0 bits (211), Expect = 2e-17
 Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
 Frame = +2

Query: 290 NWMFSN---FIIRPYFDQEFSLNEFIEASKHAVQIVSGALQNSDFKTLEGLVDKDAINAL 460
           NW+ +    F+I  YFD+EFS+ EF E +K A   VS  L    F  LE LV K+ ++AL
Sbjct: 120 NWVRTRIKAFLIWAYFDKEFSITEFSEGAKQAFAHVSKLLSQCKFDLLEELVAKEVLHAL 179

Query: 461 KTAVSQLSVSQRQLLAIEKEDIFYAFPYQVGVIFDDSDKRWVEITMCYHVLRGLKNMKES 640
           K  V+ L  + +  LA   ++I +     + + +D+  +++V I MC+  L       E+
Sbjct: 180 KEKVTSLPDNHKNALAANIDEIVFTSTGDISIYYDEKGRKFVNILMCFWYLTSANIPSET 239

Query: 641 ---GDMPPITLGAQPQYQDNIFILNYRFIREFTKGVEDSWWV 757
                +  + LG Q      +   +Y F REFT+GV+  W +
Sbjct: 240 LRGASVFQVKLGNQNVETKQLLSASYEFQREFTQGVKPDWTI 281


>AC097717-3|AAY24163.1|  291|Homo sapiens unknown protein.
          Length = 291

 Score = 89.0 bits (211), Expect = 2e-17
 Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
 Frame = +2

Query: 290 NWMFSN---FIIRPYFDQEFSLNEFIEASKHAVQIVSGALQNSDFKTLEGLVDKDAINAL 460
           NW+ +    F+I  YFD+EFS+ EF E +K A   VS  L    F  LE LV K+ ++AL
Sbjct: 120 NWVRTRIKAFLIWAYFDKEFSITEFSEGAKQAFAHVSKLLSQCKFDLLEELVAKEVLHAL 179

Query: 461 KTAVSQLSVSQRQLLAIEKEDIFYAFPYQVGVIFDDSDKRWVEITMCYHVLRGLKNMKES 640
           K  V+ L  + +  LA   ++I +     + + +D+  +++V I MC+  L       E+
Sbjct: 180 KEKVTSLPDNHKNALAANIDEIVFTSTGDISIYYDEKGRKFVNILMCFWYLTSANIPSET 239

Query: 641 ---GDMPPITLGAQPQYQDNIFILNYRFIREFTKGVEDSWWV 757
                +  + LG Q      +   +Y F REFT+GV+  W +
Sbjct: 240 LRGASVFQVKLGNQNVETKQLLSASYEFQREFTQGVKPDWTI 281


>AK026208-1|BAB15393.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22555 fis, clone HSI01193. ).
          Length = 291

 Score = 88.2 bits (209), Expect = 3e-17
 Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
 Frame = +2

Query: 290 NWMFSN---FIIRPYFDQEFSLNEFIEASKHAVQIVSGALQNSDFKTLEGLVDKDAINAL 460
           NW+ +    F+I  YFD+EFS+ EF E +K A   VS  L    F  LE LV K+ ++AL
Sbjct: 120 NWVRTRIKAFLIWAYFDKEFSITEFSEGAKQAFAHVSKLLSQCKFDLLEELVAKEVLHAL 179

Query: 461 KTAVSQLSVSQRQLLAIEKEDIFYAFPYQVGVIFDDSDKRWVEITMCYHVLRGLKNMKES 640
           K  V+ L  + +  LA   ++I +     + + +D+  +++V I MC+  L       E+
Sbjct: 180 KEKVTSLPDNHKNALAANIDEIVFTSTGGISIYYDEKGRKFVNILMCFWYLTSANIPSET 239

Query: 641 ---GDMPPITLGAQPQYQDNIFILNYRFIREFTKGVEDSWWV 757
                +  + LG Q      +   +Y F REFT+GV+  W +
Sbjct: 240 LRGASVFQVKLGNQNVETKQLLSASYEFQREFTQGVKPDWTI 281


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,056,385
Number of Sequences: 237096
Number of extensions: 2162197
Number of successful extensions: 3907
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3901
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)