Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4697
(760 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 25 1.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 1.0
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 4.1
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 7.2
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 7.2
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 9.5
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 9.5
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 9.5
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 9.5
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 9.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 9.5
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 9.5
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.6 bits (51), Expect = 1.0
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = +2
Query: 131 IAYNNVPKQIAITSKCPIIQYRKYSEQGTE 220
+A + + + CP +YR Y++ G+E
Sbjct: 249 VAQDESTSLVCVAQACPTPEYRWYAQTGSE 278
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.6 bits (51), Expect = 1.0
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = +2
Query: 131 IAYNNVPKQIAITSKCPIIQYRKYSEQGTE 220
+A + + + CP +YR Y++ G+E
Sbjct: 249 VAQDESTSLVCVAQACPTPEYRWYAQTGSE 278
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.6 bits (46), Expect = 4.1
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -1
Query: 754 PPTVFNSFCEL 722
PP ++ SFCE+
Sbjct: 137 PPAIYKSFCEI 147
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 7.2
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = -1
Query: 538 KCIKYIFFF 512
KC++Y+FFF
Sbjct: 397 KCLEYLFFF 405
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 7.2
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = -1
Query: 538 KCIKYIFFF 512
KC++Y+FFF
Sbjct: 397 KCLEYLFFF 405
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 80 NSYFANNYQNIIQSK*KRYSLN 15
N+Y NNY N K + Y++N
Sbjct: 95 NNYNNNNYNNNNYKKLQYYNIN 116
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 80 NSYFANNYQNIIQSK*KRYSLN 15
N+Y NNY N K + Y++N
Sbjct: 95 NNYNNNNYNNNNYKKLQYYNIN 116
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 80 NSYFANNYQNIIQSK*KRYSLN 15
N+Y NNY N K + Y++N
Sbjct: 95 NNYNNNNYNNNNYKKLQYYNIN 116
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 80 NSYFANNYQNIIQSK*KRYSLN 15
N+Y NNY N K + Y++N
Sbjct: 95 NNYNNNNYNNNNYKKLQYYNIN 116
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 577 LIRIIKNYSNLIRKCIK 527
L+R + N S+++R CIK
Sbjct: 43 LVRPVVNTSDVLRVCIK 59
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 577 LIRIIKNYSNLIRKCIK 527
L+R + N S+++R CIK
Sbjct: 43 LVRPVVNTSDVLRVCIK 59
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.4 bits (43), Expect = 9.5
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = +2
Query: 107 QSLRLCDKIAYNNVPKQIA 163
+ ++ D++ Y +PKQ+A
Sbjct: 386 EEMKRTDELLYQMIPKQVA 404
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,714
Number of Sequences: 438
Number of extensions: 4876
Number of successful extensions: 22
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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