Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4693
         (671 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81460-5|CAB03832.1|  952|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z70209-3|CAA94147.1|  952|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z69883-1|CAA93743.1|  829|Caenorhabditis elegans Hypothetical pr...    28   6.9  

>Z81460-5|CAB03832.1|  952|Caenorhabditis elegans Hypothetical
           protein C04A11.4 protein.
          Length = 952

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
 Frame = -3

Query: 441 ISLFLPGFG-SLTPNK--RFQTIKISTTILIFYLLY 343
           I+  +PG+G S+  N+  RF+ I +S+T L+F+ L+
Sbjct: 649 IACEIPGYGGSVNSNEAYRFRGITLSSTFLVFFCLF 684


>Z70209-3|CAA94147.1|  952|Caenorhabditis elegans Hypothetical
           protein C04A11.4 protein.
          Length = 952

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
 Frame = -3

Query: 441 ISLFLPGFG-SLTPNK--RFQTIKISTTILIFYLLY 343
           I+  +PG+G S+  N+  RF+ I +S+T L+F+ L+
Sbjct: 649 IACEIPGYGGSVNSNEAYRFRGITLSSTFLVFFCLF 684


>Z69883-1|CAA93743.1|  829|Caenorhabditis elegans Hypothetical
           protein C27C12.7 protein.
          Length = 829

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 583 EWNFYLSRASAHNKKRDDLVKLLDQFYVCVTL 488
           E++ Y+ R + ++ K+  L K+ DQF  C TL
Sbjct: 486 EFSTYIVREAMYSNKKTTLQKVTDQFEDCKTL 517


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,266,580
Number of Sequences: 27780
Number of extensions: 245061
Number of successful extensions: 546
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)