Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4690
(617 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 26 0.26
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 26 0.26
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 1.8
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 2.4
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 2.4
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 2.4
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 2.4
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 2.4
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 4.2
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 4.2
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 4.2
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 9.6
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.6
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 9.6
AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase pro... 21 9.6
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 26.2 bits (55), Expect = 0.26
Identities = 8/29 (27%), Positives = 21/29 (72%)
Frame = +1
Query: 238 NHTYNVINNNQSHSHNSKYVFPNVLSFDK 324
N+ YN NNN ++++ +K ++ N+++ ++
Sbjct: 93 NYKYNYNNNNYNNNNYNKKLYYNIINIEQ 121
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 26.2 bits (55), Expect = 0.26
Identities = 8/29 (27%), Positives = 21/29 (72%)
Frame = +1
Query: 238 NHTYNVINNNQSHSHNSKYVFPNVLSFDK 324
N+ YN NNN ++++ +K ++ N+++ ++
Sbjct: 93 NYKYNYNNNNYNNNNYNKKLYYNIINIEQ 121
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 241 HTYNVINNNQSHSHNSKYVFPNVL 312
+ YN NNN +++N K + N +
Sbjct: 328 NNYNNYNNNNYNNYNKKLYYKNYI 351
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 256 INNNQSHSHNSKYVFPNVLSFDKFFFN 336
++NN H++N KY + N K ++N
Sbjct: 85 LSNNTIHNNNYKYNYNNNNYNKKLYYN 111
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 256 INNNQSHSHNSKYVFPNVLSFDKFFFN 336
++NN H++N KY + N K ++N
Sbjct: 85 LSNNTIHNNNYKYNYNNNNYNKKLYYN 111
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 256 INNNQSHSHNSKYVFPNVLSFDKFFFN 336
++NN H++N KY + N K ++N
Sbjct: 85 LSNNTIHNNNYKYNYNNNNYNKKLYYN 111
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 256 INNNQSHSHNSKYVFPNVLSFDKFFFN 336
++NN H++N KY + N K ++N
Sbjct: 85 LSNNTIHNNNYKYNYNNNNYNKKLYYN 111
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +1
Query: 241 HTYNVINNNQSHSHNSKYVFPNVLSFDKFFFN 336
H N NNN +++ + Y N ++ K ++N
Sbjct: 324 HNNNNYNNNNYNNNYNNYNNNNYNNYKKLYYN 355
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +1
Query: 238 NHTYNVINNNQSHSHNSKYVFPNVLSFDK 324
N+ YN NNN + +N K ++ N+++ ++
Sbjct: 335 NNNYNNYNNN--NYNNYKKLYYNIINIEQ 361
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 75 YNTWQRNTINYFCNLCYSIFRI 10
YN + N N + L Y+I I
Sbjct: 338 YNNYNNNNYNNYKKLYYNIINI 359
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 4.2
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1
Query: 247 YNVINNNQSHSHNSKY 294
YN NNN ++++N+ Y
Sbjct: 94 YNNYNNNYNNNYNNNY 109
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 4.2
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1
Query: 247 YNVINNNQSHSHNSKY 294
YN NNN ++++N+ Y
Sbjct: 94 YNNYNNNYNNNYNNNY 109
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 4.2
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1
Query: 259 NNNQSHSHNSKYVFPN 306
NNN +++N+KY + N
Sbjct: 93 NNNYKYNYNNKYNYNN 108
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -3
Query: 615 PPPPPISAVKQ*CVSA 568
PP PP+ V CV +
Sbjct: 180 PPEPPVPTVTSACVGS 195
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 9.6
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -2
Query: 382 DINRVYTRVVNIQLIN*KKTYQKREHWGIHTYYYGNV 272
DIN V+T + ++ L+N + + + W + + GN+
Sbjct: 540 DINGVFTSIASLLLLNLSENHIE---WFDYAFIPGNL 573
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = +1
Query: 235 INHTYNVINNNQSHSHNS 288
+++ YN NNN +++N+
Sbjct: 318 LSNNYNYNNNNYKYNYNN 335
>AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase
protein.
Length = 85
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +1
Query: 70 VISIHNNTCT 99
+I +HNN CT
Sbjct: 21 IIGLHNNMCT 30
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,921
Number of Sequences: 438
Number of extensions: 3693
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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