Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4685
         (305 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071602-1|AAL49224.1|  208|Drosophila melanogaster RE65233p pro...    68   2e-12
AE014298-1389|AAF46538.2|  208|Drosophila melanogaster CG15251-P...    68   2e-12
AL009195-1|CAA15708.1| 3345|Drosophila melanogaster EG:30B8.4,FB...    29   1.1  
AE014298-365|AAF45756.2| 3433|Drosophila melanogaster CG3443-PB ...    29   1.1  
AY075304-1|AAL68171.1|  373|Drosophila melanogaster AT31643p pro...    27   4.5  
AE013599-1430|AAF58545.1|  373|Drosophila melanogaster CG13167-P...    27   4.5  
M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein.         27   6.0  

>AY071602-1|AAL49224.1|  208|Drosophila melanogaster RE65233p
           protein.
          Length = 208

 Score = 68.1 bits (159), Expect = 2e-12
 Identities = 39/76 (51%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
 Frame = +3

Query: 84  QLADDDALQPL--QEVGDEQLREKRKLEGITQAKFGVKNAVLGFVFGKINSLIDAKTKFV 257
           Q + D  L P+  +EV   Q R KRKL   T   F  KNAVLGFVFGKI++ +D KT+ +
Sbjct: 40  QDSSDPDLNPINAEEVLSVQERNKRKLPDAT---FEAKNAVLGFVFGKIDNFLDTKTRVI 96

Query: 258 ANLDRQNIELNKQYGI 305
             LDR NIE NKQ+ I
Sbjct: 97  EQLDRSNIEKNKQWDI 112


>AE014298-1389|AAF46538.2|  208|Drosophila melanogaster CG15251-PA
           protein.
          Length = 208

 Score = 68.1 bits (159), Expect = 2e-12
 Identities = 39/76 (51%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
 Frame = +3

Query: 84  QLADDDALQPL--QEVGDEQLREKRKLEGITQAKFGVKNAVLGFVFGKINSLIDAKTKFV 257
           Q + D  L P+  +EV   Q R KRKL   T   F  KNAVLGFVFGKI++ +D KT+ +
Sbjct: 40  QDSSDPDLNPINAEEVLSVQERNKRKLPDAT---FEAKNAVLGFVFGKIDNFLDTKTRVI 96

Query: 258 ANLDRQNIELNKQYGI 305
             LDR NIE NKQ+ I
Sbjct: 97  EQLDRSNIEKNKQWDI 112


>AL009195-1|CAA15708.1| 3345|Drosophila melanogaster
           EG:30B8.4,FBgn0003048;pcx protein.
          Length = 3345

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 20/70 (28%), Positives = 34/70 (48%)
 Frame = +3

Query: 90  ADDDALQPLQEVGDEQLREKRKLEGITQAKFGVKNAVLGFVFGKINSLIDAKTKFVANLD 269
           ADDD      EV D  +R + +  G +Q  + V++ V GF+  ++ +  D    F  NL+
Sbjct: 728 ADDD-----DEVDDVPIRRRTRALGCSQTHYSVESDVGGFLADEVGADEDVFKDFDDNLE 782

Query: 270 RQNIELNKQY 299
               EL + +
Sbjct: 783 HILSELQQTH 792


>AE014298-365|AAF45756.2| 3433|Drosophila melanogaster CG3443-PB
           protein.
          Length = 3433

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 20/70 (28%), Positives = 34/70 (48%)
 Frame = +3

Query: 90  ADDDALQPLQEVGDEQLREKRKLEGITQAKFGVKNAVLGFVFGKINSLIDAKTKFVANLD 269
           ADDD      EV D  +R + +  G +Q  + V++ V GF+  ++ +  D    F  NL+
Sbjct: 739 ADDD-----DEVDDVPIRRRTRALGCSQTHYSVESDVGGFLADEVGADEDVFKDFDDNLE 793

Query: 270 RQNIELNKQY 299
               EL + +
Sbjct: 794 HILSELQQTH 803


>AY075304-1|AAL68171.1|  373|Drosophila melanogaster AT31643p
           protein.
          Length = 373

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +2

Query: 176 KVRRQERSARVRLRENQLVDRRED*VRSEPGP 271
           +V+R+ R AR+ L++ +  +R+E   R EP P
Sbjct: 259 EVKRRMREARLSLKQRREQERKEAIKRGEPPP 290


>AE013599-1430|AAF58545.1|  373|Drosophila melanogaster CG13167-PA
           protein.
          Length = 373

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +2

Query: 176 KVRRQERSARVRLRENQLVDRRED*VRSEPGP 271
           +V+R+ R AR+ L++ +  +R+E   R EP P
Sbjct: 259 EVKRRMREARLSLKQRREQERKEAIKRGEPPP 290


>M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein.
          Length = 2483

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 20/70 (28%), Positives = 33/70 (47%)
 Frame = +3

Query: 90  ADDDALQPLQEVGDEQLREKRKLEGITQAKFGVKNAVLGFVFGKINSLIDAKTKFVANLD 269
           ADDD      EV D  +R + +  G +Q  + V++ V GF+  +  +  D    F  NL+
Sbjct: 275 ADDD-----DEVDDVPIRRRTRALGCSQTHYSVESDVGGFLADEDGADEDVFKDFDDNLE 329

Query: 270 RQNIELNKQY 299
               EL + +
Sbjct: 330 HILSELQQTH 339


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,871,341
Number of Sequences: 53049
Number of extensions: 96590
Number of successful extensions: 357
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 568694034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)