Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4684
         (803 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    24   1.9  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   4.4  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   5.8  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    22   5.8  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 30  NHYKSPVKDHRLYCCRLDQESEPQ 101
           N Y SP+  H LY    +Q S PQ
Sbjct: 267 NLYYSPLLSHGLYYVDTEQFSNPQ 290


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 345 EVDLFVFFPLPMPIALRFYFSFSLTCR 425
           E+   +FF LPM I +  Y   ++  R
Sbjct: 223 EISTMLFFVLPMTIIIVLYILIAIKLR 249


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 339 LQEVDLFVFFPLPMPIALRFYFSFSLTCR 425
           L E+   +FF +PM I L  Y    L  R
Sbjct: 212 LYELSTIIFFLIPMLIILVVYTRMGLKIR 240


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 785 QCRYMIATSSICG 747
           +C+Y IA SS CG
Sbjct: 45  KCKYGIAMSSACG 57


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,304
Number of Sequences: 438
Number of extensions: 5175
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)