Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4681
(475 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-380|ABC65863.1| 264|Drosophila melanogaster CG34049-PA... 30 1.4
AE014298-1107|AAF46312.3| 2038|Drosophila melanogaster CG2252-PB... 29 3.2
BT010104-1|AAQ22573.1| 288|Drosophila melanogaster GH11578p pro... 28 7.4
AE014296-1692|AAF50240.1| 288|Drosophila melanogaster CG3306-PA... 28 7.4
Z98269-5|CAB10973.1| 1741|Drosophila melanogaster EG:87B1.2,FBgn... 27 9.8
U40214-1|AAA91230.1| 1768|Drosophila melanogaster parallel siste... 27 9.8
AY094828-1|AAM11181.1| 1765|Drosophila melanogaster LD40380p pro... 27 9.8
AY089325-1|AAL90063.1| 263|Drosophila melanogaster AT13643p pro... 27 9.8
AY052030-1|AAK93454.1| 1422|Drosophila melanogaster LD47893p pro... 27 9.8
AF104401-1|AAF14115.1| 1827|Drosophila melanogaster SPT6 protein... 27 9.8
AF104400-1|AAF14114.1| 1831|Drosophila melanogaster SPT6 protein... 27 9.8
AE014298-861|AAF46140.1| 1831|Drosophila melanogaster CG12225-PA... 27 9.8
AE014298-345|AAF45735.2| 1092|Drosophila melanogaster CG3707-PB,... 27 9.8
AE014298-344|AAF45734.1| 1741|Drosophila melanogaster CG3707-PA,... 27 9.8
AE014297-3524|AAF56278.2| 2232|Drosophila melanogaster CG31132-P... 27 9.8
>AE014134-380|ABC65863.1| 264|Drosophila melanogaster CG34049-PA
protein.
Length = 264
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = -3
Query: 329 HSPAYLACYQQLFQIVTSLSGDMSKELETPPRACSAEVHWNLEFGKNGF-VGSVFCPTSP 153
+S YLAC Q Q + S+ K TP R+ + E W+ GK + C TS
Sbjct: 55 NSRNYLACEVQRSQSINSIKSLPVKFPSTPNRSLNTEKDWS--HGKRCLQCAAPKCKTSS 112
Query: 152 EHFPLAH*IKKDIRYIIKMF 93
+ +KKD + ++K F
Sbjct: 113 RSSIQSKKLKKDKKSLLKEF 132
>AE014298-1107|AAF46312.3| 2038|Drosophila melanogaster CG2252-PB,
isoform B protein.
Length = 2038
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/75 (21%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 173 QSQRIHFYRTQDSNAPQHYMRAEEFRVLWTYRQKER*QSGKAAGNRQGMRENAHRQKSNS 352
Q Q+ ++ Q + QH+ + ++ ++ Q+++ Q + +Q + H Q +N
Sbjct: 1513 QQQQQQTHQQQQQHQQQHHQQQQQQQLTQQQLQQQQQQQQQQQHLQQQQHQQQHHQAANK 1572
Query: 353 -LVGPNTLDSQYLSP 394
L+ P ++S SP
Sbjct: 1573 LLIIPKPIESMMPSP 1587
>BT010104-1|AAQ22573.1| 288|Drosophila melanogaster GH11578p
protein.
Length = 288
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +2
Query: 158 SLDRTQSQRIHFYRTQDSNAPQHY---MRAEEFRVLWTYRQKE 277
SLD S+R+H T DS + +R EEF WT + E
Sbjct: 239 SLDSFASERLHLASTTDSTTSEAQAMGLRHEEFHGNWTRAKSE 281
>AE014296-1692|AAF50240.1| 288|Drosophila melanogaster CG3306-PA
protein.
Length = 288
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +2
Query: 158 SLDRTQSQRIHFYRTQDSNAPQHY---MRAEEFRVLWTYRQKE 277
SLD S+R+H T DS + +R EEF WT + E
Sbjct: 239 SLDSFASERLHLASTTDSTTSEAQAMGLRHEEFHGNWTRAKSE 281
>Z98269-5|CAB10973.1| 1741|Drosophila melanogaster
EG:87B1.2,FBgn0004655;wapl protein.
Length = 1741
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -1
Query: 358 DQRIGFLPVGILPHTLPVTSSFSRLSPLFLAICPKNSKLLRAH-VVLRCIGILSSVKMD- 185
D + ++ + PH P T S L + P +RAH VV + LS D
Sbjct: 1169 DDDVEYILDALQPHNPPATRCLSALQLAAKCMMPAFRMHVRAHGVVTKFFKALSDANKDL 1228
Query: 184 SLALCS 167
SL LC+
Sbjct: 1229 SLGLCT 1234
>U40214-1|AAA91230.1| 1768|Drosophila melanogaster parallel sister
chromatids protein protein.
Length = 1768
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -1
Query: 358 DQRIGFLPVGILPHTLPVTSSFSRLSPLFLAICPKNSKLLRAH-VVLRCIGILSSVKMD- 185
D + ++ + PH P T S L + P +RAH VV + LS D
Sbjct: 1169 DDDVEYILDALQPHNPPATRCLSALQLAAKCMMPAFRMHVRAHGVVTKFFKALSDANKDL 1228
Query: 184 SLALCS 167
SL LC+
Sbjct: 1229 SLGLCT 1234
>AY094828-1|AAM11181.1| 1765|Drosophila melanogaster LD40380p protein.
Length = 1765
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +2
Query: 266 RQKER*QSGKAAGNRQGMRENAHRQKSNSLVGPNTLDSQYLSPRCYPHSRG 418
R+K + S A + +R +NS+ N D Y+ PR +RG
Sbjct: 1623 RRKAKTSSSSATTQERPLRRTRRPPSNNSIANDNDDDDDYVVPRSRRANRG 1673
>AY089325-1|AAL90063.1| 263|Drosophila melanogaster AT13643p
protein.
Length = 263
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +2
Query: 266 RQKER*QSGKAAGNRQGMRENAHRQKSNSLVGPNTLDSQYLSPRCYPHSRG 418
R+K + S A + +R +NS+ N D Y+ PR +RG
Sbjct: 156 RRKAKTSSSSATTQERPLRRTRRPPSNNSIANDNDDDDDYVVPRSRRANRG 206
>AY052030-1|AAK93454.1| 1422|Drosophila melanogaster LD47893p
protein.
Length = 1422
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 311 QGMRENAHRQK-SNSLVGPNTLDSQYLSPR 397
+ +R+N R + + +GP L QYLSPR
Sbjct: 144 ENLRDNYQRNEITQESIGPTELAKQYLSPR 173
>AF104401-1|AAF14115.1| 1827|Drosophila melanogaster SPT6 protein
protein.
Length = 1827
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 311 QGMRENAHRQK-SNSLVGPNTLDSQYLSPR 397
+ +R+N R + + +GP L QYLSPR
Sbjct: 549 ENLRDNYQRNEITQESIGPTELAKQYLSPR 578
>AF104400-1|AAF14114.1| 1831|Drosophila melanogaster SPT6 protein
protein.
Length = 1831
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 311 QGMRENAHRQK-SNSLVGPNTLDSQYLSPR 397
+ +R+N R + + +GP L QYLSPR
Sbjct: 553 ENLRDNYQRNEITQESIGPTELAKQYLSPR 582
>AE014298-861|AAF46140.1| 1831|Drosophila melanogaster CG12225-PA
protein.
Length = 1831
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 311 QGMRENAHRQK-SNSLVGPNTLDSQYLSPR 397
+ +R+N R + + +GP L QYLSPR
Sbjct: 553 ENLRDNYQRNEITQESIGPTELAKQYLSPR 582
>AE014298-345|AAF45735.2| 1092|Drosophila melanogaster CG3707-PB,
isoform B protein.
Length = 1092
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -1
Query: 358 DQRIGFLPVGILPHTLPVTSSFSRLSPLFLAICPKNSKLLRAH-VVLRCIGILSSVKMD- 185
D + ++ + PH P T S L + P +RAH VV + LS D
Sbjct: 520 DDDVEYILDALQPHNPPATRCLSALQLAAKCMMPAFRMHVRAHGVVTKFFKALSDANKDL 579
Query: 184 SLALCS 167
SL LC+
Sbjct: 580 SLGLCT 585
>AE014298-344|AAF45734.1| 1741|Drosophila melanogaster CG3707-PA,
isoform A protein.
Length = 1741
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -1
Query: 358 DQRIGFLPVGILPHTLPVTSSFSRLSPLFLAICPKNSKLLRAH-VVLRCIGILSSVKMD- 185
D + ++ + PH P T S L + P +RAH VV + LS D
Sbjct: 1169 DDDVEYILDALQPHNPPATRCLSALQLAAKCMMPAFRMHVRAHGVVTKFFKALSDANKDL 1228
Query: 184 SLALCS 167
SL LC+
Sbjct: 1229 SLGLCT 1234
>AE014297-3524|AAF56278.2| 2232|Drosophila melanogaster CG31132-PA
protein.
Length = 2232
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +2
Query: 266 RQKER*QSGKAAGNRQGMRENAHRQKSNSLVGPNTLDSQYLSPRCYPHSRG 418
R+K + S A + +R +NS+ N D Y+ PR +RG
Sbjct: 2090 RRKAKTSSSSATTQERPLRRTRRPPSNNSIANDNDDDDDYVVPRSRRANRG 2140
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,702,544
Number of Sequences: 53049
Number of extensions: 509481
Number of successful extensions: 1407
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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