Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4673
         (742 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    27   0.80 
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    26   1.4  
AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative apyrase/n...    24   5.7  
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    24   5.7  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   9.9  

>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 26.6 bits (56), Expect = 0.80
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +2

Query: 2   CNAPTQIQNKMQCF-ICVTYMIVLCT-VNPTKTREIG 106
           CNAPT   N + C  +C +     CT ++   TRE+G
Sbjct: 40  CNAPTDSANSVSCAGVCGSKHHTHCTGLSRDSTRELG 76


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
 Frame = +2

Query: 290 RLEMPPMKFRYPKSLRVNKN---DNKPNLKQIKTNLNMIMNNKDKYVNENSDVKGMF-AF 457
           RLEM   +  Y + ++ ++    D +  LKQ + N+N I++   K   +    K  F   
Sbjct: 676 RLEMQKKRSEYSQLIQEHEKELADFRAELKQTEANINSIVSEMQKTETKQGKSKDAFEKI 735

Query: 458 QSEHDSQKPQYTSLV---SPKQNPLGNKDSQSES 550
           Q++    K + + +    SPK+  L    +  E+
Sbjct: 736 QADIRLMKDELSRIERFRSPKERSLAQCKANLEA 769


>AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 584 GEIDFDDLITTNPFQ 628
           G + FDDL+T  PF+
Sbjct: 423 GNLTFDDLVTAVPFE 437


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 584 GEIDFDDLITTNPFQ 628
           G + FDDL+T  PF+
Sbjct: 423 GNLTFDDLVTAVPFE 437


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +3

Query: 12  QRKYRTRCSASYASRT*LYYAQLILPKQER*ALDTASVRSFTTFCNRS 155
           + + R +C+  + SR    Y  + +   E   L T S+R+F  + N S
Sbjct: 777 EERSRIKCTMYWPSRGTEVYGAMTVTITETQELATYSIRTFQLYRNGS 824


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,642
Number of Sequences: 2352
Number of extensions: 11952
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)