Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4673
(742 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42391-1|AAC50402.1| 2022|Homo sapiens myosin-IXb protein. 35 0.27
AB209997-1|BAE06079.1| 2028|Homo sapiens MYO9B variant protein p... 35 0.27
AB210001-1|BAE06083.1| 2845|Homo sapiens APC variant protein pro... 32 1.9
AK091176-1|BAC03600.1| 808|Homo sapiens protein ( Homo sapiens ... 32 2.5
AB058743-1|BAB47469.2| 2443|Homo sapiens KIAA1840 protein protein. 32 2.5
BC101774-1|AAI01775.1| 1182|Homo sapiens stoned B/TFIIA-alpha/be... 31 3.3
BC101772-1|AAI01773.1| 1182|Homo sapiens stoned B/TFIIA-alpha/be... 31 3.3
BC064585-1|AAH64585.1| 477|Homo sapiens GTF2A1L protein protein. 31 3.3
BC025991-1|AAH25991.1| 478|Homo sapiens TFIIA-alpha/beta-like f... 31 3.3
AK223350-1|BAD97070.1| 478|Homo sapiens TFIIA-alpha/beta-like f... 31 3.3
AF106857-1|AAD39634.1| 478|Homo sapiens TFIIA large subunit iso... 31 3.3
AF026169-1|AAD39617.1| 1182|Homo sapiens SALF protein. 31 3.3
AC073082-2|AAY15064.1| 1182|Homo sapiens unknown protein. 31 3.3
>U42391-1|AAC50402.1| 2022|Homo sapiens myosin-IXb protein.
Length = 2022
Score = 35.1 bits (77), Expect = 0.27
Identities = 26/126 (20%), Positives = 59/126 (46%)
Frame = +2
Query: 362 NLKQIKTNLNMIMNNKDKYVNENSDVKGMFAFQSEHDSQKPQYTSLVSPKQNPLGNKDSQ 541
N ++K ++N + ++ + ++ +F +E + V + +G KD
Sbjct: 1507 NANELKYLDEFLLNKINDLRSQKTPIESLFIEATEKFRSNIKTMYSVPNGKIHVGYKDLM 1566
Query: 542 SESQIVVLTNDSDFGEIDFDDLITTNPFQAMEEKNTKNYADNNSDPVKITGQSMNVLKTK 721
QIVV ++ G+ D + + N FQ++ ++ T+ Y N+ +PVK ++ + +
Sbjct: 1567 ENYQIVVSNLATERGQKDTN--LVLNLFQSLLDEFTRGYTKNDFEPVK-QSKAQKKKRKQ 1623
Query: 722 EKKIDE 739
E+ + E
Sbjct: 1624 ERAVQE 1629
>AB209997-1|BAE06079.1| 2028|Homo sapiens MYO9B variant protein
protein.
Length = 2028
Score = 35.1 bits (77), Expect = 0.27
Identities = 26/126 (20%), Positives = 59/126 (46%)
Frame = +2
Query: 362 NLKQIKTNLNMIMNNKDKYVNENSDVKGMFAFQSEHDSQKPQYTSLVSPKQNPLGNKDSQ 541
N ++K ++N + ++ + ++ +F +E + V + +G KD
Sbjct: 1513 NANELKYLDEFLLNKINDLRSQKTPIESLFIEATEKFRSNIKTMYSVPNGKIHVGYKDLM 1572
Query: 542 SESQIVVLTNDSDFGEIDFDDLITTNPFQAMEEKNTKNYADNNSDPVKITGQSMNVLKTK 721
QIVV ++ G+ D + + N FQ++ ++ T+ Y N+ +PVK ++ + +
Sbjct: 1573 ENYQIVVSNLATERGQKDTN--LVLNLFQSLLDEFTRGYTKNDFEPVK-QSKAQKKKRKQ 1629
Query: 722 EKKIDE 739
E+ + E
Sbjct: 1630 ERAVQE 1635
>AB210001-1|BAE06083.1| 2845|Homo sapiens APC variant protein protein.
Length = 2845
Score = 32.3 bits (70), Expect = 1.9
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +2
Query: 347 NDNKPNLKQIKTNLNMIMNNKDKYVNENSDVKGMFAFQSEHDSQKPQYTSLVSPKQNPLG 526
+DNK + KQ N + + N DK N V+G FAF S H + T + + L
Sbjct: 1808 SDNKDSKKQNLKNNSKVFN--DKLPNNEDRVRGSFAFDSPHHYTPIEGTPYCFSRNDSLS 1865
Query: 527 NKD 535
+ D
Sbjct: 1866 SLD 1868
>AK091176-1|BAC03600.1| 808|Homo sapiens protein ( Homo sapiens
cDNA FLJ33857 fis, clone CTONG2006004. ).
Length = 808
Score = 31.9 bits (69), Expect = 2.5
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = +2
Query: 512 QNPLGNKDSQSESQIVVLTNDSDFGEIDFDDLITTNPFQAMEEKNTKNYADNNSDPVKIT 691
Q+ LG ++E + + S GE+ FD L + F + NT Y + NS P K T
Sbjct: 537 QHTLGRNQEETEPRFSRQISTS--GELSFDSLASEFSFSKLAALNTSKYLELNSLPSKET 594
Query: 692 GQSMNVLKTKEKK 730
+ N L KE++
Sbjct: 595 CE--NRLDWKEQE 605
>AB058743-1|BAB47469.2| 2443|Homo sapiens KIAA1840 protein protein.
Length = 2443
Score = 31.9 bits (69), Expect = 2.5
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = +2
Query: 512 QNPLGNKDSQSESQIVVLTNDSDFGEIDFDDLITTNPFQAMEEKNTKNYADNNSDPVKIT 691
Q+ LG ++E + + S GE+ FD L + F + NT Y + NS P K T
Sbjct: 1808 QHTLGRNQEETEPRFSRQISTS--GELSFDSLASEFSFSKLAALNTSKYLELNSLPSKET 1865
Query: 692 GQSMNVLKTKEKK 730
+ N L KE++
Sbjct: 1866 CE--NRLDWKEQE 1876
>BC101774-1|AAI01775.1| 1182|Homo sapiens stoned
B/TFIIA-alpha/beta-like factor protein.
Length = 1182
Score = 31.5 bits (68), Expect = 3.3
Identities = 25/91 (27%), Positives = 38/91 (41%)
Frame = +2
Query: 470 DSQKPQYTSLVSPKQNPLGNKDSQSESQIVVLTNDSDFGEIDFDDLITTNPFQAMEEKNT 649
DS K Q ++ P P+ KDS S+ + + D D GEI D + + EE +
Sbjct: 1011 DSVK-QPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVD--GSGDTSSNEEIGS 1067
Query: 650 KNYADNNSDPVKITGQSMNVLKTKEKKIDED 742
AD N I G + V + + I +
Sbjct: 1068 TRDADENEFLGNIDGGDLKVPEEEADSISNE 1098
>BC101772-1|AAI01773.1| 1182|Homo sapiens stoned
B/TFIIA-alpha/beta-like factor protein.
Length = 1182
Score = 31.5 bits (68), Expect = 3.3
Identities = 25/91 (27%), Positives = 38/91 (41%)
Frame = +2
Query: 470 DSQKPQYTSLVSPKQNPLGNKDSQSESQIVVLTNDSDFGEIDFDDLITTNPFQAMEEKNT 649
DS K Q ++ P P+ KDS S+ + + D D GEI D + + EE +
Sbjct: 1011 DSVK-QPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVD--GSGDTSSNEEIGS 1067
Query: 650 KNYADNNSDPVKITGQSMNVLKTKEKKIDED 742
AD N I G + V + + I +
Sbjct: 1068 TRDADENEFLGNIDGGDLKVPEEEADSISNE 1098
>BC064585-1|AAH64585.1| 477|Homo sapiens GTF2A1L protein protein.
Length = 477
Score = 31.5 bits (68), Expect = 3.3
Identities = 25/91 (27%), Positives = 38/91 (41%)
Frame = +2
Query: 470 DSQKPQYTSLVSPKQNPLGNKDSQSESQIVVLTNDSDFGEIDFDDLITTNPFQAMEEKNT 649
DS K Q ++ P P+ KDS S+ + + D D GEI D + + EE +
Sbjct: 306 DSVK-QPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVD--GSGDTSSNEEIGS 362
Query: 650 KNYADNNSDPVKITGQSMNVLKTKEKKIDED 742
AD N I G + V + + I +
Sbjct: 363 TRDADENEFLGNIDGGDLKVPEEEADSISNE 393
>BC025991-1|AAH25991.1| 478|Homo sapiens TFIIA-alpha/beta-like
factor protein.
Length = 478
Score = 31.5 bits (68), Expect = 3.3
Identities = 25/91 (27%), Positives = 38/91 (41%)
Frame = +2
Query: 470 DSQKPQYTSLVSPKQNPLGNKDSQSESQIVVLTNDSDFGEIDFDDLITTNPFQAMEEKNT 649
DS K Q ++ P P+ KDS S+ + + D D GEI D + + EE +
Sbjct: 307 DSVK-QPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVD--GSGDTSSNEEIGS 363
Query: 650 KNYADNNSDPVKITGQSMNVLKTKEKKIDED 742
AD N I G + V + + I +
Sbjct: 364 TRDADENEFLGNIDGGDLKVPEEEADSISNE 394
>AK223350-1|BAD97070.1| 478|Homo sapiens TFIIA-alpha/beta-like
factor isoform 1 variant protein.
Length = 478
Score = 31.5 bits (68), Expect = 3.3
Identities = 25/91 (27%), Positives = 38/91 (41%)
Frame = +2
Query: 470 DSQKPQYTSLVSPKQNPLGNKDSQSESQIVVLTNDSDFGEIDFDDLITTNPFQAMEEKNT 649
DS K Q ++ P P+ KDS S+ + + D D GEI D + + EE +
Sbjct: 307 DSVK-QPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVD--GSGDTSSNEEIGS 363
Query: 650 KNYADNNSDPVKITGQSMNVLKTKEKKIDED 742
AD N I G + V + + I +
Sbjct: 364 TRDADENEFLGNIDGGDLKVPEEEADSISNE 394
>AF106857-1|AAD39634.1| 478|Homo sapiens TFIIA large subunit
isoform ALF protein.
Length = 478
Score = 31.5 bits (68), Expect = 3.3
Identities = 25/91 (27%), Positives = 38/91 (41%)
Frame = +2
Query: 470 DSQKPQYTSLVSPKQNPLGNKDSQSESQIVVLTNDSDFGEIDFDDLITTNPFQAMEEKNT 649
DS K Q ++ P P+ KDS S+ + + D D GEI D + + EE +
Sbjct: 307 DSVK-QPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVD--GSGDTSSNEEIGS 363
Query: 650 KNYADNNSDPVKITGQSMNVLKTKEKKIDED 742
AD N I G + V + + I +
Sbjct: 364 TRDADENEFLGNIDGGDLKVPEEEADSISNE 394
>AF026169-1|AAD39617.1| 1182|Homo sapiens SALF protein.
Length = 1182
Score = 31.5 bits (68), Expect = 3.3
Identities = 25/91 (27%), Positives = 38/91 (41%)
Frame = +2
Query: 470 DSQKPQYTSLVSPKQNPLGNKDSQSESQIVVLTNDSDFGEIDFDDLITTNPFQAMEEKNT 649
DS K Q ++ P P+ KDS S+ + + D D GEI D + + EE +
Sbjct: 1011 DSVK-QPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVD--GSGDTSSNEEIGS 1067
Query: 650 KNYADNNSDPVKITGQSMNVLKTKEKKIDED 742
AD N I G + V + + I +
Sbjct: 1068 TRDADENEFLGNIDGGDLKVPEEEADSISNE 1098
>AC073082-2|AAY15064.1| 1182|Homo sapiens unknown protein.
Length = 1182
Score = 31.5 bits (68), Expect = 3.3
Identities = 25/91 (27%), Positives = 38/91 (41%)
Frame = +2
Query: 470 DSQKPQYTSLVSPKQNPLGNKDSQSESQIVVLTNDSDFGEIDFDDLITTNPFQAMEEKNT 649
DS K Q ++ P P+ KDS S+ + + D D GEI D + + EE +
Sbjct: 1011 DSVK-QPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVD--GSGDTSSNEEIGS 1067
Query: 650 KNYADNNSDPVKITGQSMNVLKTKEKKIDED 742
AD N I G + V + + I +
Sbjct: 1068 TRDADENEFLGNIDGGDLKVPEEEADSISNE 1098
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,173,569
Number of Sequences: 237096
Number of extensions: 1708873
Number of successful extensions: 7413
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7412
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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